1. End-to-end deep learning for recognition of ploidy status using time-lapse videos
- Author
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Chun I. Lee, Wen Ting Hsieh, Mark Liu, Maw Sheng Lee, Wei Lin Zheng, Chun Chia Huang, T. Arthur Chang, Esther En Shu Kuo, Yan Ru Su, and Chien Hong Chen
- Subjects
Adult ,0301 basic medicine ,Computer science ,Fertilization in Vitro ,Time-Lapse Imaging ,03 medical and health sciences ,Deep Learning ,0302 clinical medicine ,End-to-end principle ,Image Processing, Computer-Assisted ,Genetics ,Humans ,Assisted Reproduction Technologies ,Preimplantation Diagnosis ,Genetics (clinical) ,Retrospective Studies ,030219 obstetrics & reproductive medicine ,Receiver operating characteristic ,business.industry ,Deep learning ,Obstetrics and Gynecology ,Pattern recognition ,General Medicine ,Aneuploidy ,Diploidy ,Video image ,Blastocyst ,030104 developmental biology ,Reproductive Medicine ,Area Under Curve ,Calibration ,Female ,Artificial intelligence ,Ploidy ,business ,Developmental Biology - Abstract
PURPOSE: Our retrospective study is to investigate an end-to-end deep learning model in identifying ploidy status through raw time-lapse video. METHODS: By randomly dividing the dataset of time-lapse videos with known outcome of preimplantation genetic testing for aneuploidy (PGT-A), a deep learning model on raw videos was trained by the 80% dataset, and used to test the remaining 20%, by feeding time-lapse videos as input and the PGT-A prediction as output. The performance was measured by an average area under the curve (AUC) of the receiver operating characteristic curve. RESULT(S): With 690 sets of time-lapse video image, combined with PGT-A results, our deep learning model has achieved an AUC of 0.74 from the test dataset (138 videos), in discriminating between aneuploid embryos (group 1) and others (group 2, including euploid and mosaic embryos). CONCLUSION: Our model demonstrated a proof of concept and potential in recognizing the ploidy status of tested embryos. A larger scale and further optimization on the exclusion criteria would be included in our future investigation, as well as prospective approach.
- Published
- 2021
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