15 results on '"Muzi LI"'
Search Results
2. Transcriptome and Proteins Analysis Reveals the Gene Regulatory Processes Mediated by LaAP2L1, an AP2/ERF Transcription Factor, Functioning in Fast-Growing Heterosis in Larix kaempferi
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Yinxia Zhu, Hui Li, Lixia He, Xu Zhang, Mei Wu, Yu Pan, Xiuwen Zhang, Muzi Li, and Chunguo Wang
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Plant Science ,Agronomy and Crop Science - Published
- 2022
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3. Effects of dietary compound probiotics and heat-killed compound probiotics on antioxidative capacity, plasma biochemical parameters, intestinal morphology, and microbiota of Cyprinus carpio haematopterus
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Lin Wu, Lei Wang, Shuchang Cui, Zuxiang Peng, Zexin Liu, Muzi Li, Yuzhe Han, and Tongjun Ren
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Aquatic Science ,Agronomy and Crop Science - Published
- 2023
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4. Decision Authority on Positive Mental Health in the Workforce: A Moderated Mediation Model of Social Support, Gender, Income, and Occupation
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Xiangfei Meng, Carl D’Arcy, Muzi Li, Songli Mei, and Tingting Gao
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Mediation (statistics) ,Social support ,Moderated mediation ,Community health ,Workforce ,Positive psychology ,Psychology ,Mental health ,Social psychology ,Social Sciences (miscellaneous) ,Work experience - Abstract
The present study aimed to investigate the mediating effect of social support in the relationship between decision authority and positive mental health as well as the moderating effects of socio-demographic characteristics closely related to this relationship among working populations. Data analyzed was from the Canadian Community Health Survey-Mental Health 2012. A total of 15,867 individuals with complete information on past 12-month work experience prior to the data collection were included in this study. Mediation analysis suggested that social support could partially mediate the association between decision authority and positive mental health. Multiple group analysis indicated that the higher mediation effect of social support was more likely to be reported by males, people from middle- and high-income groups, and those doing service and white-collar jobs. Findings on roles of social support and socio-demographic characteristics in the relationship between decision authority and positive mental health could lay the groundwork to articulate and develop effective strategies to promote positive mental health in the workforce.
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- 2021
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5. Mechanism of fertilization-induced auxin synthesis in the endosperm for seed and fruit development
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Lei Guo, Xi Luo, Muzi Li, Dirk Joldersma, Madison Plunkert, and Zhongchi Liu
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Multidisciplinary ,Indoleacetic Acids ,Arabidopsis Proteins ,Gene Expression Regulation, Plant ,Fertilization ,Fruit ,Seeds ,Arabidopsis ,General Physics and Astronomy ,General Chemistry ,Fragaria ,Endosperm ,General Biochemistry, Genetics and Molecular Biology - Abstract
The dominance of flowering plants on earth is owed largely to the evolution of maternal tissues such as fruit and seedcoat that protect and disseminate the seeds. The mechanism of how fertilization triggers the development of these specialized maternal tissues is not well understood. A key event is the induction of auxin synthesis in the endosperm, and the mobile auxin subsequently stimulates seedcoat and fruit development. However, the regulatory mechanism of auxin synthesis in the endosperm remains unknown. Here, we show that a type I MADS box gene AGL62 is required for the activation of auxin synthesis in the endosperm in both Fragaria vesca, a diploid strawberry, and in Arabidopsis. Several strawberry FveATHB genes were identified as downstream targets of FveAGL62 and act to repress auxin biosynthesis. In this work, we identify a key mechanism for auxin induction to mediate fertilization success, a finding broadly relevant to flowering plants.
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- 2022
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6. Trends and patterns of life satisfaction and its relationship with social support in Canada, 2009 to 2018
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Yingying, Su, Carl, D'Arcy, Muzi, Li, and Xiangfei, Meng
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Adult ,Male ,Canada ,Young Adult ,Multidisciplinary ,Adolescent ,Surveys and Questionnaires ,Humans ,Social Support ,Female ,Personal Satisfaction ,Child ,Health Surveys - Abstract
The present study aims to explore the trends and patterns of life satisfaction in Canada from 2009 to 2018 and to examine changes in the associations between social support and life satisfaction over time. Data were from ten annual Canadian Community Health Surveys (CCHS). Each survey represents 97% of the Canadian population. Point estimates and 95% confidence intervals (CIs) of life satisfaction were calculated at the population level. Generalized linear regression was used to explore the relationship between life satisfaction and social support both nationally and in different population subgroups. The annual life satisfaction score gradually increased both at national and provincial levels from 2009 to 2018. Individuals who were women, aged between 12 and 19 years, living in rural areas, were most satisfied with their lives. There was a positive correlation between social support and life satisfaction for the provinces and the study years for which information on social support was available. Our findings suggest strengthening social support could be a public health target for promoting greater life satisfaction. Timely availability and analysis of life satisfaction and social support data could better inform policy and promote wellbeing at a population level.
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- 2022
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7. Toxoplasma gondii metacaspase 2 is an important factor that influences bradyzoite formation in the Pru strain
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Xingju Song, Jing Liu, Qun Liu, Xu Yang, Mengyang Lin, and Muzi Li
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Parasite Encystment ,Protozoan Proteins ,Parasite Load ,BAG1 ,Microbiology ,Mice ,Downregulation and upregulation ,parasitic diseases ,Animals ,Parasite hosting ,Gene ,Life Cycle Stages ,Attenuated vaccine ,General Veterinary ,biology ,Brain ,Gene Expression Regulation, Developmental ,Toxoplasma gondii ,General Medicine ,biology.organism_classification ,In vitro ,Metacaspase ,Toxoplasmosis, Animal ,Infectious Diseases ,Insect Science ,Parasitology ,Toxoplasma - Abstract
Toxoplasma gondii is an important zoonotic protozoan of the phylum Apicomplexa that can infect nearly all warm-blooded animals. The parasite can exist as the interconvertible tachyzoite or bradyzoite forms, leading to acute or latent infection, respectively. No drug has been reported to penetrate the cyst wall and reduce bradyzoite survival and proliferation till now. The transcriptional level of metacaspases 2 (TgMCA2) in T. gondii is significantly upregulated during the formation of bradyzoites in the Pru strain, indicating that it may play an important role in the formation of bradyzoites. To further explore the function of TgMCA2, we constructed a TgMCA2 gene-knockout variant of the Pru strain (Δmca2). Comparative analysis revealed that the proliferative capacity of Pru Δmca2 increased, while the invasion and egressing properties were not affected by the knockout. Further data shows that the tachyzoites of Δmca2 failed to induce differentiation and form bradyzoites in vitro, and the transcriptional levels of some of the bradyzoite-specific genes (such as BAG1, LDH2, and SAG4A) in Δmca2 were significantly lower compared with that in the Pru strain at the bradyzoite stage. In vivo, no cysts were detected in Δmca2-infected mice. Further determination of parasite burden in Δmca2- and Pru-infected mice brain tissue at the genetic level showed that the gene load was significantly lower than that in Pru. In summary, we confirmed that TgMCA2 contributes to the formation of bradyzoites, and could provide an important foundation for the development of attenuated vaccines for the prevention of T. gondii infection.
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- 2020
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8. Arabis paniculata ApHIPP3 increases Cd tolerance by interacting with ApCHC1
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Jie Liu, Sisi Liao, Muzi Li, and Xuye Du
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Genetics - Published
- 2022
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9. Site-specific Umpolung amidation of carboxylic acids via triplet synergistic catalysis
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Muzi Li, Jin Xie, Yunyun Ning, Shuaishuai Wang, Jie Han, and Chengjian Zhu
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Multidisciplinary ,010405 organic chemistry ,Science ,General Physics and Astronomy ,Photoredox catalysis ,Regioselectivity ,Synthetic chemistry methodology ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,Article ,General Biochemistry, Genetics and Molecular Biology ,0104 chemical sciences ,Umpolung ,Catalysis ,chemistry.chemical_compound ,chemistry ,Nucleophile ,Amide ,Functional group ,Synergistic catalysis ,Photocatalysis - Abstract
Development of catalytic amide bond-forming methods is important because they could potentially address the existing limitations of classical methods using superstoichiometric activating reagents. In this paper, we disclose an Umpolung amidation reaction of carboxylic acids with nitroarenes and nitroalkanes enabled by the triplet synergistic catalysis of FeI2, P(V)/P(III) and photoredox catalysis, which avoids the production of byproducts from stoichiometric coupling reagents. A wide range of carboxylic acids, including aliphatic, aromatic and alkenyl acids participate smoothly in such reactions, generating structurally diverse amides in good yields (86 examples, up to 97% yield). This Umpolung amidation strategy opens a method to address challenging regioselectivity issues between nucleophilic functional groups, and complements the functional group compatibility of the classical amidation protocols. The synthetic robustness of the reaction is demonstrated by late-stage modification of complex molecules and gram-scale applications., Catalytic amide bond-forming methods is important because they could potentially address the existing limitations of classical methods using superstoichiometric activating reagents. Here the authors show an Umpolung amidation reaction of carboxylic acids with nitroarenes and nitroalkanes enabled by FeI2, P(V)/P(III) and photoredox catalysis that avoids the production of byproducts.
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- 2021
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10. What do DNA methylation studies tell us about depression? A systematic review
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Xiangfei Meng, Carl D'Arcy, Xintong Li, Muzi Li, Ridha Joober, and Tieyuan Zhang
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0301 basic medicine ,Future studies ,Bisulfite sequencing ,Review Article ,lcsh:RC321-571 ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Humans ,Medicine ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Biological Psychiatry ,Depressive Disorder ,Depression ,business.industry ,Clinical study design ,Guideline ,DNA Methylation ,3. Good health ,Study Characteristics ,Psychiatry and Mental health ,030104 developmental biology ,Systematic review ,DNA methylation ,Pyrosequencing ,business ,030217 neurology & neurosurgery ,Clinical psychology - Abstract
There has been a limited number of systematic reviews conducted to summarize the overview of the relationship between DNA methylation and depression, and to critically appraise the roles of major study characteristics in the accuracy of study findings. This systematic review aims to critically appraise the impact of study characteristics on the association between DNA methylation and depression, and summarize the overview of this association. Electronic databases and gray literatures until December 2017 were searched for English-language studies with standard diagnostic criteria of depression. A total of 67 studies were included in this review along with a summary of their study characteristics. We grouped the findings into etiological and treatment studies. Majority of these selected studies were recently published and from developed countries. Whole blood samples were the most studied common tissues. Bisulfite conversion, along with pyrosequencing, was widely used to test the DNA methylation level across all the studies. High heterogeneity existed among the studies in terms of experimental and statistical methodologies and study designs. As recommended by the Cochrane guideline, a systematic review without meta-analysis should be undertaken. This review has, in general, found that DNA methylation modifications were associated with depression. Subgroup analyses showed that most studies found BDNF and SLC6A4 hypermethylations to be associated with MDD or depression in general. In contrast, studies on NR3C1, OXTR, and other genes, which were tested by only few studies, reported mixed findings. More longitudinal studies using standardized experimental and laboratory methodologies are needed in future studies to enable more systematical comparisons and quantitative synthesis.
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- 2019
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11. Correction to: Decision Authority on Positive Mental Health in the Workforce: A Moderated Mediation Model of Social Support, Gender, Income, and Occupation
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Tingting Gao, Songli Mei, Muzi Li, Carl D’Arcy, and Xiangfei Meng
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Social Sciences (miscellaneous) - Published
- 2021
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12. Systematic pan-cancer analysis of somatic allele frequency
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Mercedeh Movassagh, Tatiyana V. Apanasovich, Paula Restrepo, Nerissa Tunnessen, Nathan Edwards, Muzi Li, Keith A. Crandall, Nawaf Alomran, Christopher Trenkov, Anelia Horvath, Qianqian Zhang, and Liam F. Spurr
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0301 basic medicine ,Somatic cell ,lcsh:Medicine ,Biology ,Polymorphism, Single Nucleotide ,Article ,DNA sequencing ,Transcriptome ,03 medical and health sciences ,Gene Frequency ,Neoplasms ,Gene expression ,Humans ,Allele ,lcsh:Science ,Allele frequency ,Gene ,Alleles ,Genetics ,Regulation of gene expression ,Multidisciplinary ,lcsh:R ,Computational Biology ,High-Throughput Nucleotide Sequencing ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,Mutation ,lcsh:Q - Abstract
Imbalanced expression of somatic alleles in cancer can suggest functional and selective features, and can therefore indicate possible driving potential of the underlying genetic variants. To explore the correlation between allele frequency of somatic variants and total gene expression of their harboring gene, we used the unique data set of matched tumor and normal RNA and DNA sequencing data of 5523 distinct single nucleotide variants in 381 individuals across 10 cancer types obtained from The Cancer Genome Atlas (TCGA). We analyzed the allele frequency in the context of the variant and gene functional features and linked it with changes in the total gene expression. We documented higher allele frequency of somatic variants in cancer-implicated genes (Cancer Gene Census, CGC). Furthermore, somatic alleles bearing premature terminating variants (PTVs), when positioned in CGC genes, appeared to be less frequently degraded via nonsense-mediated mRNA decay, indicating possible favoring of truncated proteins by the tumor transcriptome. Among the genes with multiple PTVs with high allele frequency, ARID1, TP53 and NSD1 were known key cancer genes. All together, our analyses suggest that high allele frequency of tumor somatic variants can indicate driving functionality and can serve to identify potential cancer-implicated genes.
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- 2018
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13. Enhancement of Environmental Hazard Degradation in the Presence of Lignin: a Proteomics Study
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Honglu Zhao, Yanbing Cheng, Shangxian Xie, Muzi Li, Su Sun, Hongbo Yu, Xiaoyu Zhang, Joshua S. Yuan, Xiaotong Li, and Susie Y. Dai
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Proteomics ,0301 basic medicine ,030106 microbiology ,Irpex lacteus ,lcsh:Medicine ,Gene Expression ,Lignocellulosic biomass ,Lignin ,complex mixtures ,Article ,Hazardous Substances ,03 medical and health sciences ,chemistry.chemical_compound ,Biotransformation ,Manganese peroxidase ,Botany ,lcsh:Science ,Shotgun proteomics ,Multidisciplinary ,biology ,lcsh:R ,fungi ,Fungi ,Computational Biology ,food and beverages ,biology.organism_classification ,Biodegradation, Environmental ,030104 developmental biology ,chemistry ,Biochemistry ,Proteome ,lcsh:Q ,Azo Compounds ,Oxidation-Reduction - Abstract
Proteomics studies of fungal systems have progressed dramatically based on the availability of more fungal genome sequences in recent years. Different proteomics strategies have been applied toward characterization of fungal proteome and revealed important gene functions and proteome dynamics. Presented here is the application of shot-gun proteomic technology to study the bio-remediation of environmental hazards by white-rot fungus. Lignin, a naturally abundant component of the plant biomass, is discovered to promote the degradation of Azo dye by white-rot fungus Irpex lacteus CD2 in the lignin/dye/fungus system. Shotgun proteomics technique was used to understand degradation mechanism at the protein level for the lignin/dye/fungus system. Our proteomics study can identify about two thousand proteins (one third of the predicted white-rot fungal proteome) in a single experiment, as one of the most powerful proteomics platforms to study the fungal system to date. The study shows a significant enrichment of oxidoreduction functional category under the dye/lignin combined treatment. An in vitro validation is performed and supports our hypothesis that the synergy of Fenton reaction and manganese peroxidase might play an important role in DR5B dye degradation. The results could guide the development of effective bioremediation strategies and efficient lignocellulosic biomass conversion.
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- 2017
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14. Overexpressed somatic alleles are enriched in functional elements in Breast Cancer
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Nawaf Alomran, Mercedeh Movassagh, Keith A. Crandall, Yulian Manchev, Tatiyana V. Apanasovich, Muzi Li, Paula Restrepo, Christian Miller, Sonali Bahl, Anelia Horvath, Stephanie Warnken, Nathan Edwards, Chris Trenkov, and Liam F. Spurr
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0301 basic medicine ,Oncology ,medicine.medical_specialty ,Genotype ,Science ,Breast Neoplasms ,Biology ,Response Elements ,Article ,DNA sequencing ,Transcriptome ,03 medical and health sciences ,Breast cancer ,Internal medicine ,Genetic variation ,medicine ,Humans ,Allele ,Gene ,Alleles ,Genetics ,Multidisciplinary ,Gene Expression Profiling ,Genetic Variation ,medicine.disease ,3. Good health ,Gene Expression Regulation, Neoplastic ,Gene expression profiling ,030104 developmental biology ,Mutation ,Medicine ,Female - Abstract
Asymmetric allele content in the transcriptome can be indicative of functional and selective features of the underlying genetic variants. Yet, imbalanced alleles, especially from diploid genome regions, are poorly explored in cancer. Here we systematically quantify and integrate the variant allele fraction from corresponding RNA and DNA sequence data from patients with breast cancer acquired through The Cancer Genome Atlas (TCGA). We test for correlation between allele prevalence and functionality in known cancer-implicated genes from the Cancer Gene Census (CGC). We document significant allele-preferential expression of functional variants in CGC genes and across the entire dataset. Notably, we find frequent allele-specific overexpression of variants in tumor-suppressor genes. We also report a list of over-expressed variants from non-CGC genes. Overall, our analysis presents an integrated set of features of somatic allele expression and points to the vast information content of the asymmetric alleles in the cancer transcriptome.
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- 2017
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15. Supramolecular assembly and DNA cleavage activity of a nickel(II) complex
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Tong Rao, Xue Lei Hu, Muzi Li, Hong Zhou, Xiao Fei Yan, Zhi Quan Pan, and Qi Mao Huang
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Chemistry ,Hydrogen bond ,Imine ,Metals and Alloys ,Supramolecular chemistry ,chemistry.chemical_element ,Crystal structure ,Supramolecular assembly ,Inorganic Chemistry ,Nickel ,chemistry.chemical_compound ,Crystallography ,Octahedron ,Materials Chemistry ,Molecule - Abstract
A new mononuclear nickel(II) complex, [NiL2] (HL = ((2-(5-fluoro-2-hydroxybenzyl)(2-(imidazole-2-yl)ethyl))imine), has been synthesized and characterized by IR, UV–vis and X-ray diffraction technique. The X-ray crystal structure of the complex shows that the coordination environment around Ni(II) ion is an approximate octahedron. Each molecule connects with four adjacent neighbors through strong hydrogen bonding interactions (N–H···O, d(N–O) = 2.687 A and ∠N–H···O = 158.3(1)°), forming a supramolecular network. The interaction of the complex with DNA was monitored using agarose gel electrophoresis. The results show that the complex has DNA cleavage activity. The cyclic voltammogram shows one pair of anodic and cathodic peaks with E1/2 = −1.06 V, assigned to the Ni(II)/Ni(I) couple.
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- 2010
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