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Paul C. D. Johnson, Sara Hägglund, Katarina Näslund, Gilles Meyer, Geraldine Taylor, Richard J. Orton, Siamak Zohari, Daniel T. Haydon, Jean François Valarcher, University of Glasgow, Swedish University of Agricultural Sciences (SLU), Department of Clinical Sciences, National Veterinary Institute [Uppsala] (SVA), Interactions hôtes-agents pathogènes [Toulouse] (IHAP), Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), The Pirbright Institute, Biotechnology and Biological Sciences Research Council (BBSRC), MRC - University of Glasgow Centre for Virus Research, This project was funded by the Swedish Research Council (Formas, Sweden), grant no. 2016-00463. Some samples were collected through funding from the European Union's Horizon 2020 Program for research, technological development, and demonstration under the Grant Agreement n° 633184 (Project's name SAPHIR), or from the Swedish Research Council (Formas, Sweden), the Biotechnology and Biological Sciences Research Council (BBSRC, UK) and L'Agence Nationale de la Recherche (ANR, France), through the Emerging and Major Infectious Diseases of Livestock (EMIDA) project in the European Research Area Network (ERA-NET), grant no. FP#87., ANR-10-EMID-0005,BRSV-DIVA(2010), and European Project: 633184,H2020,H2020-SFS-2014-2,SAPHIR(2015)