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2. Morphine and high-fat diet differentially alter the gut microbiota composition and metabolic function in lean versus obese mice

6. Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale

8. Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics

9. Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows

10. The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

11. Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance

12. Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics

13. Genomic reconstruction of fossil and living microorganisms in ancient Siberian permafrost

18. Active sulfur cycling in the terrestrial deep subsurface

19. Comparing DNA, RNA and protein levels for measuring microbial dynamics in soil microcosms amended with nitrogen fertilizer

21. Correction to: Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

23. Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn’s remission patients despite temporal variations in microbial taxa, genomes, and proteomes

24. Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

27. The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism

28. Deletion of the hfsB gene increases ethanol production in Thermoanaerobacterium saccharolyticum and several other thermophilic anaerobic bacteria

32. Correction: Corrigendum: Pentose sugars inhibit metabolism and increase expression of an AgrD-type cyclic pentapeptide in Clostridium thermocellum

37. Impacts of chemical gradients on microbial community structure

38. Integrated omics analyses reveal the details of metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass

41. Transcript, protein and metabolite temporal dynamics in the CAM plant Agave

44. Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum

49. Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community

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