9 results on '"Bakkes, Deon"'
Search Results
2. Molecular characterization and phylogenetic analysis of Argas persicus (Oken, 1818) (Acari: Argasidae) from domestic birds in eastern Algeria.
- Author
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Rahmani, Amira, Laatamna, AbdElkarim, Yu, Zhijun, Lafri, Ismail, Herrada, Zakaria, Chitimia-Dobler, Lidia, and Bakkes, Deon K.
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MITES ,POULTRY farms ,TRADITIONAL farming ,GENETIC markers ,TICKS ,RIBOSOMAL RNA ,POULTRY - Abstract
Argas persicus (the fowl tick) is a species of soft tick commonly associated with poultry farms. It has a wide geographic distribution and colonizes different climate regions. Morphological identification of A. persicus has been reported worldwide, but genetic data regarding its molecular characterization is limited. The present study provides data for morphological identification and genetic characterization of A. persicus collected from domestic birds in traditional farms from east Algeria (Setif region). Additionally, A. persicus samples originating from Gansu province in China were included for comparative molecular study. In total, 1518 ticks collected from 30 infested farms were examined and morphologically identified as A. persicus. Furthermore, the 14 tick samples obtained from China were morphologically identified as A. persicus. Molecular analysis of 30 ticks from Algeria (one tick from each infested farm) and the 14 Chinese samples based on PCR, sequencing, and phylogenetic analysis of three mitochondrial genetic markers (16S rRNA, 12S rRNA, and cox1) confirmed morphological results where all samples belonged to the A. persicus group. However, phylogenetic analysis showed that all Algerian samples and two Chinese samples belong to A. persicus sensu stricto (s.s.), while the remaining Chinese samples represented A. persicus sensu lato (s.l.) (divergent lineage). The present study confirms the occurrence of A. persicus s.s. both in Algeria and China, as well as provides novel molecular data for a distinct Chinese lineage of A. persicus. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
3. Morphological abnormalities in Hyalomma dromedarii and Hyalomma rufipes (Acari: Ixodidae) collected from dromedary camels (Camelus dromedarius) in Aswan, Egypt.
- Author
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Okely, Mohammed, Bakkes, Deon K., and Chitimia-Dobler, Lidia
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CAMELS ,HYALOMMA ,IXODIDAE ,MITES ,TICKS ,HUMAN abnormalities - Abstract
The present study reports anomalies in Hyalomma dromedarii and Hyalomma rufipes adults collected from dromedary camels (Camelus dromedarius) in Aswan, Egypt, between January and June 2022. A total of 52 adult ticks displayed one or several local and/or general anomalies. A wide variety of local anomalies was observed including atrophy of one or multiple legs, ectromely, absence of accessory adanal and subanal plates, fusion of adanal and accessory plates, and presence of sclerotized formation in the ventral plate, as well as abnormalities of the spiracle, anal groove, festoon, parma, and posteromedian groove. General anomalies comprised of asymmetries and gynandromorphism. Local anomalies were documented among H. dromedarii and H. rufipes, whereas general anomalies were documented only from H. dromedarii. The present work represents the first report of deuterogynander intrigue gynandromorphism in H. dromedarii, as well as the first report of morphological abnormalities in H. dromedarii and H. rufipes from Egypt. [ABSTRACT FROM AUTHOR]
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- 2022
- Full Text
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4. Tick species from cattle in the Adama Region of Ethiopia and pathogens detected.
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Tufa, Tafese Beyene, Wölfel, Silke, Zubriková, Dana, Víchová, Bronislava, Andersson, Martin, Rieß, Ramona, Rutaihwa, Liliana, Fuchs, André, Orth, Hans Martin, Häussinger, Dieter, Feldt, Torsten, Poppert, Sven, Dobler, Gerhard, Bakkes, Deon K., and Chitimia-Dobler, Lidia
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RICKETTSIA ,TICKS ,SPECIES ,RHIPICEPHALUS ,PATHOGENIC bacteria ,TICK-borne diseases ,DOMESTIC animals ,CATTLE diseases - Abstract
Ticks will diminish productivity among farm animals and transmit zoonotic diseases. We conducted a study to identify tick species infesting slaughter bulls from Adama City and to screen them for tick-borne pathogens. In 2016, 291 ticks were collected from 37 bulls in Adama, which were ready for slaughter. Ticks were identified morphologically. Total genomic DNA was extracted from ticks and used to test for Rickettsia spp. with real-time PCR. Species identification was done by phylogenetic analysis using sequencing that targeted the 23S-5S intergenic spacer region and ompA genes. Four tick species from two genera, Amblyomma and Rhipicephalus, were identified. Amblyomma cohaerens was the dominant species (n = 241, 82.8%), followed by Amblyomma variegatum (n = 22, 7.5%), Rhipicephalus pulchellus (n = 19, 6.5%), and Rhipicephalus decoloratus (n = 9, 3.0%). Among all ticks, 32 (11%) were positive for Rickettsia spp. and 15 (5.2%) of these were identified as R. africae comprising at least two genetic clades, occurring in A. variegatum (n = 10) and A. cohaerens (n = 5). The remainder of Rickettsia-positive samples could not be amplified due to low DNA yield. Furthermore, another 15 (5.2%) samples carried other pathogenic bacteria: Ehrlichia ruminantium (n = 9; 3.1%) in A. cohaerens, Ehrlichia sp. (n = 3; 1%) in Rh. pulchellus and A. cohaerens, Anaplasma sp. (n = 1; 0.5%) in A. cohaerens, and Neoehrlichia mikurensis (n = 2; 0.7%) in A. cohaerens. All ticks were negative for Bartonella spp., Babesia spp., Theileria spp., and Hepatozoon spp. We reported for the first time E. ruminatium, N. mikurensis, Ehrlichia sp., and Anaplasma sp. in A. cohaerens. Medically and veterinarily important pathogens were mostly detected from A. variegatum and A. cohaerens. These data are relevant for a One-health approach for monitoring and prevention of tick-borne disease transmission. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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5. Morphological anomalies in Rhipicephalus sanguineus s.s. (Acari: Ixodidae) collected from dogs in steppe and high plateaus regions, Algeria.
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Laatamna, AbdElkarim, Bakkes, Deon K., and Chitimia-Dobler, Lidia
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BROWN dog tick ,IXODIDAE ,MITES ,RHIPICEPHALUS ,DOGS ,STEPPES - Abstract
The present report describes morphological anomalies in Rhipicephalus sanguineus s.s. collected from dogs between February 2017 and May 2019 in the steppic region of Djelfa and high plateau area of Bordj-Bou-Arreridj in Algeria. Out of 1043 ticks from 147 infested dogs, four adult ticks (0.38%), collected from four dogs, exhibited local morphological abnormalities. One male displayed ectromely of leg I left, and the other three specimens exhibited multiple associated anomalies in idiosomas and exoskeletons, festoons, stigmas (spiracles), as well as in adanal and accessory plates. This report provides additional exemplars of morphological abnormalities in tick populations of Africa, particularly North Africa. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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6. Morphological and molecular identification of ixodid tick species (Acari: Ixodidae) infesting cattle in Uganda.
- Author
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Balinandi, Stephen, Chitimia-Dobler, Lidia, Grandi, Giulio, Nakayiki, Teddy, Kabasa, William, Bbira, Johnson, Lutwama, Julius J., Bakkes, Deon K., Malmberg, Maja, and Mugisha, Lawrence
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RHIPICEPHALUS ,IXODIDAE ,MITES ,TICKS ,BROWN dog tick ,TICK-borne diseases - Abstract
In Uganda, the role of ticks in zoonotic disease transmission is not well described, partly, due to limited available information on tick diversity. This study aimed to identify the tick species that infest cattle. Between September and November 2017, ticks (n = 4362) were collected from 5 districts across Uganda (Kasese, Hoima, Gulu, Soroti, and Moroto) and identified morphologically at Uganda Virus Research Institute. Morphological and genetic validation was performed in Germany on representative identified specimens and on all unidentified ticks. Ticks were belonging to 15 species: 8 Rhipicephalus species (Rhipicephalus appendiculatus, Rhipicephalus evertsi evertsi, Rhipicephalus microplus, Rhipicephalus decoloratus, Rhipicephalus afranicus, Rhipicephalus pulchellus, Rhipicephalus simus, and Rhipicephalus sanguineus tropical lineage); 5 Amblyomma species (Amblyomma lepidum, Amblyomma variegatum, Amblyomma cohaerens, Amblyomma gemma, and Amblyomma paulopunctatum); and 2 Hyalomma species (Hyalomma rufipes and Hyalomma truncatum). The most common species were R. appendiculatus (51.8%), A. lepidum (21.0%), A. variegatum (14.3%), R. evertsi evertsi (8.2%), and R. decoloratus (2.4%). R. afranicus is a new species recently described in South Africa and we report its presence in Uganda for the first time. The sequences of R. afranicus were 2.4% divergent from those obtained in Southern Africa. We confirm the presence of the invasive R. microplus in two districts (Soroti and Gulu). Species diversity was highest in Moroto district (p = 0.004) and geographical predominance by specific ticks was observed (p = 0.001). The study expands the knowledge on tick fauna in Uganda and demonstrates that multiple tick species with potential to transmit several tick-borne diseases including zoonotic pathogens are infesting cattle. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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7. Mitochondrial 16S rRNA gene analysis reveals occurrence of Rhipicephalus sanguineus sensu stricto from steppe and high plateaus regions, Algeria.
- Author
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Laatamna, AbdElkarim, Oswald, Beate, Chitimia-Dobler, Lidia, and Bakkes, Deon K.
- Subjects
BROWN dog tick ,RHIPICEPHALUS ,STEPPES ,RIBOSOMAL RNA ,TICKS ,SEQUENCE analysis - Abstract
The present study aims to perform comparative genetic characterization for R. sanguineus s.l. infesting Algerian dogs living in steppe and high plateau regions based on mitochondrial 16S rRNA gene sequencing and phylogenetic analysis. In total, 1043 ticks were collected from 147 infested dogs, including 756 ticks from 124 dogs in Djelfa and 287 ticks from 23 dogs in Bordj-Bou-Arreridj. All ticks were morphologically identified as R. sanguineus s.l., and 87 specimens were randomly selected for molecular analysis. Sequences obtained from selected ticks clustered with sequences of R. sanguineus s.l. from France, Germany, Portugal, and Spain, all of which belong to R. sanguineus s.s. The occurrence of R. sanguineus s.s. in Algeria is an interesting result given that most R. sanguineus in Africa cluster among the tropical lineage. This finding should prompt further investigation by exhaustive studies across Algerian territory. Such data can be useful to understand the dispersal route of R. sanguineus s.s. from Europe to North Africa, or whether their occurrence in Algeria is a result of historical biogeography. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
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8. Ixodid tick species and two tick-borne pathogens in three areas in the Sudan.
- Author
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Shuaib, Yassir Adam, Elhag, Ahmed Muhammed-Ahmed Wd, Brima, Yassir Abakar, Abdalla, Mohamed Abdalsalam, Bakiet, Amel Omer, Mohmed-Noor, Saad El-Tiab, Lemhöfer, Giulia, Bestehorn, Malena, Poppert, Sven, Schaper, Sabine, Dobler, Gerhard, Bakkes, Deon K., and Chitimia-Dobler, Lidia
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RICKETTSIA ,ANAPLASMA phagocytophilum ,TICKS ,HEMORRHAGIC fever ,SPECIES ,DOMESTIC animals ,CASTOR bean tick ,ZOONOSES - Abstract
Ticks are important parasites from economic and public health points of view because of their ability to reduce farm animals' productivity and transmit zoonotic diseases. We conducted this cross-sectional study between January and March 2016 and between March and April 2017 to identify tick species in West Darfur, Al-Jazeera, and the River Nile states in the Sudan and to investigate whether these ticks carry Rickettsia spp. and Crimean-Congo hemorrhagic fever (CCHF) virus. In total, 1593 ticks were collected from 207 animals and identified based on morphology or 16S rRNA gene and tested for Rickettsia spp. and CCHF virus either individually or as pools containing 2 to 10 pooled ticks using molecular methods. Overall, 14 tick species belonging to three genera, namely Amblyomma, Hyalomma, and Rhipicephalus, were identified. Hyalomma anatolicum and Rhipicephalus evertsi evertsi were the most frequent ticks. A total of 561 tests comprised of individual or pooled ticks were conducted and 13.7% (77/561) were positive for Rickettsia spp. which were mostly Rickettsia aeschlimannii and R. africae. The highest positivity was noticed among H. rufipes collected from cattle and camels in West Darfur. However, none of the screened Hyalomma ticks harbored CCHF viral RNA. These findings suggest that there might be a risk of zoonotic transmission of Rickettsia spp. by ticks but zoonotic transmission of CCHF virus is apparently doubtful. An in-depth and a country-wide epidemiological study is needed to better understand the dynamic of Rickettsia spp. and CCHF virus in the Sudan. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
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9. Evaluation of measurement error in rotational mounting of larval Rhipicephalus (Acari: Ixodida: Ixodidae) species in geometric morphometrics.
- Author
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Bakkes, Deon
- Subjects
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RHIPICEPHALUS , *MORPHOMETRICS , *BIOLOGICAL classification , *MEASUREMENT errors , *SURFACE analysis - Abstract
Geometric morphometric analysis, in combination with modern computational power, allows for precise measurements of morphological shape to study even minimal variation. One key challenge, however, is 2D photographs which serve as proxies for 3D structures that introduce measurement error into a dataset by omitting variability in the Z dimension. The ease of application of 2D proxies means we should optimize them, rather than limit studies by enforcing expensive or complex protocols. This may be done by explicitly measuring and reporting error. A rotational mounting surface should be capable of reducing measurement error associated with positioning (rotation). This study empirically quantified positioning error in basis capituli of three closely related Rhipicephalus species larvae. It investigates symmetrical and asymmetrical components of variation, in addition to the number of replicates required to obtain confident results. Asymmetry showed rotational error along the roll axis (side to side) which had a large effect that confounded species variation. In contrast, symmetrical variation showed much less rotational error, and only along a pitch axis (forwards and backwards) that was much smaller than species variation. Some systematic error was noted in roll axis variation that caused the left sides of specimens to be slightly raised. However, this error was small, and was avoidable when considering symmetrical variation. Confidence of differences in multivariate means between groups increased drastically with three replicates (15%), and slightly more with five (5%). This study demonstrates that variation at and below the individual level is out of scope for rotational mounting, and will provide unreliable results. However, this mounting method is validated for questions pertaining to species variation and taxonomy. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
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