1. Barycentric Algebras and Gene Expression
- Author
-
Anna B. Romanowska and Jonathan D. H. Smith
- Subjects
Algebra ,symbols.namesake ,Interior algebra ,Computer science ,Logic gate ,symbols ,Regular polygon ,Boolean algebras canonically defined ,Barycentric coordinate system ,Stone's representation theorem for Boolean algebras ,Fuzzy logic ,Boolean algebra - Abstract
Barycentric algebras have seen widespread application in the modeling of convex sets, semilattices, and quantum mechanics. Recently, they were developed further to encompass Boolean logic and if-then-else algebras. This paper discusses an application of barycentric algebras to systems biology. Here, they provide a calculus for the conversion from simplified Boolean models of gene transcription to fuzzy models that give a more realistic tracking of the biochemistry. Indeed, it appears that logic gates experimentally observed in cells actually follow the barycentric algebra format.
- Published
- 2009