28 results on '"Hanaoka S"'
Search Results
2. Data set terminology of deep learning in medicine: a historical review and recommendation.
- Author
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Walston SL, Seki H, Takita H, Mitsuyama Y, Sato S, Hagiwara A, Ito R, Hanaoka S, Miki Y, and Ueda D
- Subjects
- Humans, History, 20th Century, Artificial Intelligence, Deep Learning, Terminology as Topic
- Abstract
Medicine and deep learning-based artificial intelligence (AI) engineering represent two distinct fields each with decades of published history. The current rapid convergence of deep learning and medicine has led to significant advancements, yet it has also introduced ambiguity regarding data set terms common to both fields, potentially leading to miscommunication and methodological discrepancies. This narrative review aims to give historical context for these terms, accentuate the importance of clarity when these terms are used in medical deep learning contexts, and offer solutions to mitigate misunderstandings by readers from either field. Through an examination of historical documents, including articles, writing guidelines, and textbooks, this review traces the divergent evolution of terms for data sets and their impact. Initially, the discordant interpretations of the word 'validation' in medical and AI contexts are explored. We then show that in the medical field as well, terms traditionally used in the deep learning domain are becoming more common, with the data for creating models referred to as the 'training set', the data for tuning of parameters referred to as the 'validation (or tuning) set', and the data for the evaluation of models as the 'test set'. Additionally, the test sets used for model evaluation are classified into internal (random splitting, cross-validation, and leave-one-out) sets and external (temporal and geographic) sets. This review then identifies often misunderstood terms and proposes pragmatic solutions to mitigate terminological confusion in the field of deep learning in medicine. We support the accurate and standardized description of these data sets and the explicit definition of data set splitting terminologies in each publication. These are crucial methods for demonstrating the robustness and generalizability of deep learning applications in medicine. This review aspires to enhance the precision of communication, thereby fostering more effective and transparent research methodologies in this interdisciplinary field., (© 2024. The Author(s) under exclusive licence to Japan Radiological Society.)
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- 2024
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3. Detection of pulmonary nodules in chest radiographs: novel cost function for effective network training with purely synthesized datasets.
- Author
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Hanaoka S, Nomura Y, Yoshikawa T, Nakao T, Takenaga T, Matsuzaki H, Yamamichi N, and Abe O
- Subjects
- Humans, Radiographic Image Interpretation, Computer-Assisted methods, Tomography, X-Ray Computed methods, Radiography, Thoracic methods, Algorithms, Multiple Pulmonary Nodules diagnostic imaging, Neural Networks, Computer, Lung Neoplasms diagnostic imaging, Solitary Pulmonary Nodule diagnostic imaging
- Abstract
Purpose: Many large radiographic datasets of lung nodules are available, but the small and hard-to-detect nodules are rarely validated by computed tomography. Such difficult nodules are crucial for training nodule detection methods. This lack of difficult nodules for training can be addressed by artificial nodule synthesis algorithms, which can create artificially embedded nodules. This study aimed to develop and evaluate a novel cost function for training networks to detect such lesions. Embedding artificial lesions in healthy medical images is effective when positive cases are insufficient for network training. Although this approach provides both positive (lesion-embedded) images and the corresponding negative (lesion-free) images, no known methods effectively use these pairs for training. This paper presents a novel cost function for segmentation-based detection networks when positive-negative pairs are available., Methods: Based on the classic U-Net, new terms were added to the original Dice loss for reducing false positives and the contrastive learning of diseased regions in the image pairs. The experimental network was trained and evaluated, respectively, on 131,072 fully synthesized pairs of images simulating lung cancer and real chest X-ray images from the Japanese Society of Radiological Technology dataset., Results: The proposed method outperformed RetinaNet and a single-shot multibox detector. The sensitivities were 0.688 and 0.507 when the number of false positives per image was 0.2, respectively, with and without fine-tuning under the leave-one-case-out setting., Conclusion: To our knowledge, this is the first study in which a method for detecting pulmonary nodules in chest X-ray images was evaluated on a real clinical dataset after being trained on fully synthesized images. The synthesized dataset is available at https://zenodo.org/records/10648433 ., (© 2024. The Author(s).)
- Published
- 2024
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4. Performance changes due to differences among annotating radiologists for training data in computerized lesion detection.
- Author
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Nomura Y, Hanaoka S, Hayashi N, Yoshikawa T, Koshino S, Sato C, Tatsuta M, Tanaka Y, Kano S, Nakaya M, Inui S, Kusakabe M, Nakao T, Miki S, Watadani T, Nakaoka R, Shimizu A, and Abe O
- Subjects
- Humans, Diagnosis, Computer-Assisted methods, Clinical Competence, Magnetic Resonance Angiography methods, Machine Learning, Observer Variation, Lung Neoplasms diagnostic imaging, Lung Neoplasms diagnosis, Image Interpretation, Computer-Assisted methods, Solitary Pulmonary Nodule diagnostic imaging, Solitary Pulmonary Nodule diagnosis, Intracranial Aneurysm diagnostic imaging, Intracranial Aneurysm diagnosis, Radiologists, Tomography, X-Ray Computed methods, Software
- Abstract
Purpose: The quality and bias of annotations by annotators (e.g., radiologists) affect the performance changes in computer-aided detection (CAD) software using machine learning. We hypothesized that the difference in the years of experience in image interpretation among radiologists contributes to annotation variability. In this study, we focused on how the performance of CAD software changes with retraining by incorporating cases annotated by radiologists with varying experience., Methods: We used two types of CAD software for lung nodule detection in chest computed tomography images and cerebral aneurysm detection in magnetic resonance angiography images. Twelve radiologists with different years of experience independently annotated the lesions, and the performance changes were investigated by repeating the retraining of the CAD software twice, with the addition of cases annotated by each radiologist. Additionally, we investigated the effects of retraining using integrated annotations from multiple radiologists., Results: The performance of the CAD software after retraining differed among annotating radiologists. In some cases, the performance was degraded compared to that of the initial software. Retraining using integrated annotations showed different performance trends depending on the target CAD software, notably in cerebral aneurysm detection, where the performance decreased compared to using annotations from a single radiologist., Conclusions: Although the performance of the CAD software after retraining varied among the annotating radiologists, no direct correlation with their experience was found. The performance trends differed according to the type of CAD software used when integrated annotations from multiple radiologists were used., (© 2024. The Author(s).)
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- 2024
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5. GPT-4 Turbo with Vision fails to outperform text-only GPT-4 Turbo in the Japan Diagnostic Radiology Board Examination.
- Author
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Hirano Y, Hanaoka S, Nakao T, Miki S, Kikuchi T, Nakamura Y, Nomura Y, Yoshikawa T, and Abe O
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- Humans, Japan, Specialty Boards, Clinical Competence, Educational Measurement methods, Radiology education
- Abstract
Purpose: To assess the performance of GPT-4 Turbo with Vision (GPT-4TV), OpenAI's latest multimodal large language model, by comparing its ability to process both text and image inputs with that of the text-only GPT-4 Turbo (GPT-4 T) in the context of the Japan Diagnostic Radiology Board Examination (JDRBE)., Materials and Methods: The dataset comprised questions from JDRBE 2021 and 2023. A total of six board-certified diagnostic radiologists discussed the questions and provided ground-truth answers by consulting relevant literature as necessary. The following questions were excluded: those lacking associated images, those with no unanimous agreement on answers, and those including images rejected by the OpenAI application programming interface. The inputs for GPT-4TV included both text and images, whereas those for GPT-4 T were entirely text. Both models were deployed on the dataset, and their performance was compared using McNemar's exact test. The radiological credibility of the responses was assessed by two diagnostic radiologists through the assignment of legitimacy scores on a five-point Likert scale. These scores were subsequently used to compare model performance using Wilcoxon's signed-rank test., Results: The dataset comprised 139 questions. GPT-4TV correctly answered 62 questions (45%), whereas GPT-4 T correctly answered 57 questions (41%). A statistical analysis found no significant performance difference between the two models (P = 0.44). The GPT-4TV responses received significantly lower legitimacy scores from both radiologists than the GPT-4 T responses., Conclusion: No significant enhancement in accuracy was observed when using GPT-4TV with image input compared with that of using text-only GPT-4 T for JDRBE questions., (© 2024. The Author(s).)
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- 2024
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6. Impact of CT-determined low kidney volume on renal function decline: a propensity score-matched analysis.
- Author
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Kikuchi T, Hanaoka S, Nakao T, Nomura Y, Mori H, and Yoshikawa T
- Abstract
Objectives: To investigate the relationship between low kidney volume and subsequent estimated glomerular filtration rate (eGFR) decline in eGFR category G2 (60-89 mL/min/1.73 m
2 ) population., Methods: In this retrospective study, we evaluated 5531 individuals with eGFR category G2 who underwent medical checkups at our institution between November 2006 and October 2017. Exclusion criteria were absent for follow-up visit, missing data, prior renal surgery, current renal disease under treatment, large renal masses, and horseshoe kidney. We developed a 3D U-net-based automated system for renal volumetry on CT images. Participants were grouped by sex-specific kidney volume deviations set at mean minus one standard deviation. After 1:1 propensity score matching, we obtained 397 pairs of individuals in the low kidney volume (LKV) and control groups. The primary endpoint was progression of eGFR categories within 5 years, assessed using Cox regression analysis., Results: This study included 3220 individuals (mean age, 60.0 ± 9.7 years; men, n = 2209). The kidney volume was 404.6 ± 67.1 and 376.8 ± 68.0 cm3 in men and women, respectively. The low kidney volume (LKV) cutoff was 337.5 and 308.8 cm3 for men and women, respectively. LKV was a significant risk factor for the endpoint with an adjusted hazard ratio of 1.64 (95% confidence interval: 1.09-2.45; p = 0.02)., Conclusion: Low kidney volume may adversely affect subsequent eGFR maintenance; hence, the use of imaging metrics may help predict eGFR decline., Critical Relevance Statement: Low kidney volume is a significant predictor of reduced kidney function over time; thus, kidney volume measurements could aid in early identification of individuals at risk for declining kidney health., Key Points: • This study explores how kidney volume affects subsequent kidney function maintenance. • Low kidney volume was associated with estimated glomerular filtration rate decreases. • Low kidney volume is a prognostic indicator of estimated glomerular filtration rate decline., (© 2024. The Author(s).)- Published
- 2024
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7. Improved identification of tumors in 18F-FDG-PET examination by normalizing the standard uptake in the liver based on blood test data.
- Author
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Alam MA, Hanaoka S, Nomura Y, Kikuchi T, Nakao T, Takenaga T, Hayashi N, Yoshikawa T, and Abe O
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- Humans, Radiopharmaceuticals, Positron-Emission Tomography methods, Liver diagnostic imaging, Fluorodeoxyglucose F18, Neoplasms diagnostic imaging
- Abstract
Purpose: Standardized uptake values (SUVs) derived from
18 F-fluoro-2-deoxy-D-glucose positron emission tomography/computed tomography are a crucial parameter for identifying tumors or abnormalities in an organ. Moreover, exploring ways to improve the identification of tumors or abnormalities using a statistical measurement tool is important in clinical research. Therefore, we developed a fully automatic method to create a personally normalized Z-score map of the liver SUV., Methods: The normalized Z-score map for each patient was created using the SUV mean and standard deviation estimated from blood-test-derived variables, such as alanine aminotransferase and aspartate aminotransferase, as well as other demographic information. This was performed using the least absolute shrinkage and selection operator (LASSO)-based estimation formula. We also used receiver operating characteristic (ROC) to analyze the results of people with and without hepatic tumors and compared them to the ROC curve of normal SUV., Results: A total of 7757 people were selected for this study. Of these, 7744 were healthy, while 13 had abnormalities. The area under the ROC curve results indicated that the anomaly detection approach (0.91) outperformed only the maximum SUV (0.89). To build the LASSO regression, sets of covariates, including sex, weight, body mass index, blood glucose level, triglyceride, total cholesterol, γ-glutamyl transpeptidase, total protein, creatinine, insulin, albumin, and cholinesterase, were used to determine the SUV mean, whereas weight was used to determine the SUV standard deviation., Conclusion: The Z-score normalizes the mean and standard deviation. It is effective in ROC curve analysis and increases the clarity of the abnormality. This normalization is a key technique for effective measurement of maximum glucose consumption by tumors in the liver., (© 2024. The Author(s).)- Published
- 2024
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8. Anomaly detection in chest 18 F-FDG PET/CT by Bayesian deep learning.
- Author
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Nakao T, Hanaoka S, Nomura Y, Hayashi N, and Abe O
- Subjects
- Bayes Theorem, Humans, Positron Emission Tomography Computed Tomography methods, Positron-Emission Tomography methods, Radiopharmaceuticals, Deep Learning, Fluorodeoxyglucose F18
- Abstract
Purpose: To develop an anomaly detection system in PET/CT with the tracer
18 F-fluorodeoxyglucose (FDG) that requires only normal PET/CT images for training and can detect abnormal FDG uptake at any location in the chest region., Materials and Methods: We trained our model based on a Bayesian deep learning framework using 1878 PET/CT scans with no abnormal findings. Our model learns the distribution of standard uptake values in these normal training images and detects out-of-normal uptake regions. We evaluated this model using 34 scans showing focal abnormal FDG uptake in the chest region. This evaluation dataset includes 28 pulmonary and 17 extrapulmonary abnormal FDG uptake foci. We performed per-voxel and per-slice receiver operating characteristic (ROC) analyses and per-lesion free-response receiver operating characteristic analysis., Results: Our model showed an area under the ROC curve of 0.992 on discriminating abnormal voxels and 0.852 on abnormal slices. Our model detected 41 of 45 (91.1%) of the abnormal FDG uptake foci with 12.8 false positives per scan (FPs/scan), which include 26 of 28 pulmonary and 15 of 17 extrapulmonary abnormalities. The sensitivity at 3.0 FPs/scan was 82.2% (37/45)., Conclusion: Our model trained only with normal PET/CT images successfully detected both pulmonary and extrapulmonary abnormal FDG uptake in the chest region., (© 2022. The Author(s).)- Published
- 2022
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9. Versatile anomaly detection method for medical images with semi-supervised flow-based generative models.
- Author
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Shibata H, Hanaoka S, Nomura Y, Nakao T, Sato I, Sato D, Hayashi N, and Abe O
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- Bayes Theorem, Humans, ROC Curve, Radiography, Radiologists, Pneumonia diagnostic imaging
- Abstract
Purpose: Radiologists interpret many medical images and clinical practice demands timely interpretation, resulting in a heavy workload. To reduce the workload, here we formulate and validate a method that can handle different types of medical image and can detect virtually all types of lesion in a medical image. For the first time, we show that two flow-based deep generative (FDG) models can predict the logarithm posterior probability in a semi-supervised approach., Methods: We adopt two FDG models in conjunction with Bayes' theorem to predict the logarithm posterior probability that a medical image is normal. We trained one of the FDG models with normal images and the other FDG model with normal and non-normal images., Results: We validated the method using two types of medical image: chest X-ray images (CXRs) and brain computed tomography images (BCTs). The area under the receiver operating characteristic curve for pneumonia-like opacities in CXRs was 0.839 on average, and for infarction in BCTs was 0.904., Conclusion: We formulated a method of predicting the logarithm posterior probability using two FDG models. We validated that the method can detect abnormal findings in CXRs and BCTs with both an acceptable performance for testing and a comparatively light workload for training., (© 2021. CARS.)
- Published
- 2021
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10. Preliminary study of generalized semiautomatic segmentation for 3D voxel labeling of lesions based on deep learning.
- Author
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Nomura Y, Hanaoka S, Takenaga T, Nakao T, Shibata H, Miki S, Yoshikawa T, Watadani T, Hayashi N, and Abe O
- Subjects
- Humans, Liver, Magnetic Resonance Imaging, Thorax, Tomography, X-Ray Computed, Deep Learning
- Abstract
Purpose: The three-dimensional (3D) voxel labeling of lesions requires significant radiologists' effort in the development of computer-aided detection software. To reduce the time required for the 3D voxel labeling, we aimed to develop a generalized semiautomatic segmentation method based on deep learning via a data augmentation-based domain generalization framework. In this study, we investigated whether a generalized semiautomatic segmentation model trained using two types of lesion can segment previously unseen types of lesion., Methods: We targeted lung nodules in chest CT images, liver lesions in hepatobiliary-phase images of Gd-EOB-DTPA-enhanced MR imaging, and brain metastases in contrast-enhanced MR images. For each lesion, the 32 × 32 × 32 isotropic volume of interest (VOI) around the center of gravity of the lesion was extracted. The VOI was input into a 3D U-Net model to define the label of the lesion. For each type of target lesion, we compared five types of data augmentation and two types of input data., Results: For all considered target lesions, the highest dice coefficients among the training patterns were obtained when using a combination of the existing data augmentation-based domain generalization framework and random monochrome inversion and when using the resized VOI as the input image. The dice coefficients were 0.639 ± 0.124 for the lung nodules, 0.660 ± 0.137 for the liver lesions, and 0.727 ± 0.115 for the brain metastases., Conclusions: Our generalized semiautomatic segmentation model could label unseen three types of lesion with different contrasts from the surroundings. In addition, the resized VOI as the input image enables the adaptation to the various sizes of lesions even when the size distribution differed between the training set and the test set., (© 2021. CARS.)
- Published
- 2021
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11. IJCARS-JAMIT 2019-2020 special issue.
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Hanaoka S, Hara T, and Shimizu A
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- 2021
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12. Performance changes due to differences in training data for cerebral aneurysm detection in head MR angiography images.
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Nomura Y, Hanaoka S, Nakao T, Hayashi N, Yoshikawa T, Miki S, Watadani T, and Abe O
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- Angiography, Cerebral Angiography, Humans, Machine Learning, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Neural Networks, Computer, Intracranial Aneurysm diagnostic imaging
- Abstract
Purpose: The performance of computer-aided detection (CAD) software depends on the quality and quantity of the dataset used for machine learning. If the data characteristics in development and practical use are different, the performance of CAD software degrades. In this study, we investigated changes in detection performance due to differences in training data for cerebral aneurysm detection software in head magnetic resonance angiography images., Materials and Methods: We utilized three types of CAD software for cerebral aneurysm detection in MRA images, which were based on 3D local intensity structure analysis, graph-based features, and convolutional neural network. For each type of CAD software, we compared three types of training pattern, which were two types of training using single-site data and one type of training using multisite data. We also carried out internal and external evaluations., Results: In training using single-site data, the performance of CAD software largely and unpredictably fluctuated when the training dataset was changed. Training using multisite data did not show the lowest performance among the three training patterns for any CAD software and dataset., Conclusion: The training of cerebral aneurysm detection software using data collected from multiple sites is desirable to ensure the stable performance of the software., (© 2021. Japan Radiological Society.)
- Published
- 2021
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13. Multichannel three-dimensional fully convolutional residual network-based focal liver lesion detection and classification in Gd-EOB-DTPA-enhanced MRI.
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Takenaga T, Hanaoka S, Nomura Y, Nakao T, Shibata H, Miki S, Yoshikawa T, Hayashi N, and Abe O
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- Contrast Media, Gadolinium DTPA, Humans, Liver diagnostic imaging, Magnetic Resonance Imaging, Carcinoma, Hepatocellular, Liver Neoplasms diagnostic imaging
- Abstract
Purpose: Gadolinium ethoxybenzyl diethylenetriamine pentaacetic acid (Gd-EOB-DTPA)-enhanced magnetic resonance imaging (MRI) has high diagnostic accuracy in the detection of liver lesions. There is a demand for computer-aided detection/diagnosis software for Gd-EOB-DTPA-enhanced MRI. We propose a deep learning-based method using one three-dimensional fully convolutional residual network (3D FC-ResNet) for liver segmentation and another 3D FC-ResNet for simultaneous detection and classification of a focal liver lesion in Gd-EOB-DTPA-enhanced MRI., Methods: We prepared a five-phase (unenhanced, arterial, portal venous, equilibrium, and hepatobiliary phases) series as the input image sets and labeled focal liver lesion (hepatocellular carcinoma, metastasis, hemangiomas, cysts, and scars) images as the output image sets. We used 100 cases to train our model, 42 cases to determine the hyperparameters of our model, and 42 cases to evaluate our model. We evaluated our model by free-response receiver operating characteristic curve analysis and using a confusion matrix., Results: Our model simultaneously detected and classified focal liver lesions. In the test cases, the detection accuracy for whole focal liver lesions had a true-positive ratio of 0.6 at an average of 25 false positives per case. The classification accuracy was 0.790., Conclusion: We proposed the simultaneous detection and classification of a focal liver lesion in Gd-EOB-DTPA-enhanced MRI using multichannel 3D FC-ResNet. Our results indicated simultaneous detection and classification are possible using a single network. It is necessary to further improve detection sensitivity to help radiologists., (© 2021. CARS.)
- Published
- 2021
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14. Computer-aided detection of cerebral aneurysms with magnetic resonance angiography: usefulness of volume rendering to display lesion candidates.
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Miki S, Nakao T, Nomura Y, Okimoto N, Nyunoya K, Nakamura Y, Kurokawa R, Amemiya S, Yoshikawa T, Hanaoka S, Hayashi N, and Abe O
- Subjects
- Humans, ROC Curve, Retrospective Studies, Cerebral Angiography methods, Image Interpretation, Computer-Assisted methods, Intracranial Aneurysm diagnosis, Magnetic Resonance Angiography methods
- Abstract
Purpose: The clinical usefulness of computer-aided detection of cerebral aneurysms has been investigated using different methods to present lesion candidates, but suboptimal methods may have limited its usefulness. We compared three presentation methods to determine which can benefit radiologists the most by enabling them to detect more aneurysms., Materials and Methods: We conducted a multireader multicase observer performance study involving six radiologists and using 470 lesion candidates output by a computer-aided detection program, and compared the following three different presentation methods using the receiver operating characteristic analysis: (1) a lesion candidate is encircled on axial slices, (2) a lesion candidate is overlaid on a volume-rendered image, and (3) combination of (1) and (2). The response time was also compared., Results: As compared with axial slices, radiologists showed significantly better detection performance when presented with volume-rendered images. There was no significant difference in response time between the two methods. The combined method was associated with a significantly longer response time, but had no added merit in terms of diagnostic accuracy., Conclusion: Even with the aid of computer-aided detection, radiologists overlook many aneurysms if the presentation method is not optimal. Overlaying colored lesion candidates on volume-rendered images can help them detect more aneurysms.
- Published
- 2021
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15. Unsupervised Deep Anomaly Detection in Chest Radiographs.
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Nakao T, Hanaoka S, Nomura Y, Murata M, Takenaga T, Miki S, Watadani T, Yoshikawa T, Hayashi N, and Abe O
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- Female, Humans, Male, Middle Aged, ROC Curve, Radiography, Radiologists, Neural Networks, Computer, Radiography, Thoracic
- Abstract
The purposes of this study are to propose an unsupervised anomaly detection method based on a deep neural network (DNN) model, which requires only normal images for training, and to evaluate its performance with a large chest radiograph dataset. We used the auto-encoding generative adversarial network (α-GAN) framework, which is a combination of a GAN and a variational autoencoder, as a DNN model. A total of 29,684 frontal chest radiographs from the Radiological Society of North America Pneumonia Detection Challenge dataset were used for this study (16,880 male and 12,804 female patients; average age, 47.0 years). All these images were labeled as "Normal," "No Opacity/Not Normal," or "Opacity" by board-certified radiologists. About 70% (6,853/9,790) of the Normal images were randomly sampled as the training dataset, and the rest were randomly split into the validation and test datasets in a ratio of 1:2 (7,610 and 15,221). Our anomaly detection system could correctly visualize various lesions including a lung mass, cardiomegaly, pleural effusion, bilateral hilar lymphadenopathy, and even dextrocardia. Our system detected the abnormal images with an area under the receiver operating characteristic curve (AUROC) of 0.752. The AUROCs for the abnormal labels Opacity and No Opacity/Not Normal were 0.838 and 0.704, respectively. Our DNN-based unsupervised anomaly detection method could successfully detect various diseases or anomalies in chest radiographs by training with only the normal images., (© 2021. The Author(s).)
- Published
- 2021
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16. Novel platform for development, training, and validation of computer-assisted detection/diagnosis software.
- Author
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Nomura Y, Miki S, Hayashi N, Hanaoka S, Sato I, Yoshikawa T, Masutani Y, and Abe O
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- Algorithms, Humans, Imaging, Three-Dimensional, User-Computer Interface, Databases, Factual, Diagnosis, Computer-Assisted, Software
- Abstract
Purpose: To build a novel, open-source, purely web-based platform system to address problems in the development and clinical use of computer-assisted detection/diagnosis (CAD) software. The new platform system will replace the existing system for the development and validation of CAD software, Clinical Infrastructure for Radiologic Computation of United Solutions (CIRCUS)., Methods: In our new system, the two top-level applications visible to users are the web-based image database (CIRCUS DB; database) and the Docker plug-in-based CAD execution platform (CIRCUS CS; clinical server). These applications are built on top of a shared application programming interface server, a three-dimensional image viewer component, and an image repository., Results: We successfully installed our new system into a Linux server at two clinical sites. A total of 1954 cases were registered in CIRCUS DB. We have been utilizing CIRCUS CS with four Docker-based CAD plug-ins., Conclusions: We have successfully built a new version of the CIRCUS system. Our platform was successfully implemented at two clinical sites, and we plan to publish it as an open-source software project.
- Published
- 2020
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17. HoTPiG: a novel graph-based 3-D image feature set and its applications to computer-assisted detection of cerebral aneurysms and lung nodules.
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Hanaoka S, Nomura Y, Takenaga T, Murata M, Nakao T, Miki S, Yoshikawa T, Hayashi N, Abe O, and Shimizu A
- Subjects
- Algorithms, Humans, Sensitivity and Specificity, Support Vector Machine, Diagnosis, Computer-Assisted methods, Imaging, Three-Dimensional methods, Intracranial Aneurysm diagnostic imaging, Lung Neoplasms diagnostic imaging, Radiographic Image Interpretation, Computer-Assisted methods, Tomography, X-Ray Computed methods
- Abstract
Purpose: A novel image feature set named histogram of triangular paths in graph (HoTPiG) is presented. The purpose of this study is to evaluate the feasibility of the proposed HoTPiG feature set through two clinical computer-aided detection tasks: nodule detection in lung CT images and aneurysm detection in head MR angiography images., Methods: The HoTPiG feature set is calculated from an undirected graph structure derived from a binarized volume. The features are derived from a 3-D histogram in which each bin represents a triplet of shortest path distances between the target node and all possible node pairs near the target node. First, the vessel structure is extracted from CT/MR volumes. Then, a graph structure is extracted using an 18-neighbor rule. Using this graph, a HoTPiG feature vector is calculated at every foreground voxel. After explicit feature mapping with an exponential-χ
2 kernel, each voxel is judged by a linear support vector machine classifier. The proposed method was evaluated using 300 CT and 300 MR datasets., Results: The proposed method successfully detected lung nodules and cerebral aneurysms. The sensitivity was about 80% when the number of false positives was three per case for both applications., Conclusions: The HoTPiG image feature set was presented, and its high general versatility was shown through two medical lesion detection applications.- Published
- 2019
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18. Optimizing image quality using automatic exposure control based on the signal-difference-to-noise ratio: a phantom study.
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Kawashima H, Ichikawa K, Hanaoka S, and Matsubara K
- Subjects
- Automation, Humans, Radiographic Image Enhancement, Algorithms, Phantoms, Imaging, Radiographic Image Interpretation, Computer-Assisted, Signal-To-Noise Ratio
- Abstract
This study proposes to adjust the sensitivity of automatic exposure control (AEC) for achieving consistent image quality over a range of subject thicknesses in abdominal radiography simulations. The relation between image quality and subject thickness was investigated using a digital radiography system with 10-, 15-, 20-, and 25-cm-thick acrylic phantom. Simple pixel signal-to-noise ratio (SNR) was measured to check the default AEC accuracy for each thickness, and image quality was evaluated using the signal-difference-to-noise ratio (SDNR) with an additional acrylic plate and bone-equivalent material. Based on the figure of merit theory, dose ratios to obtain constant image quality regardless of the subject thickness were calculated from SDNR results. The AEC setup was manually modified using this dose ratio, and visibility was examined using a CDRAD 2.0 contrast-detail analysis phantom. Moreover, the entrance surface dose (ESD) was estimated as an index of exposure dose using exposure parameters. The default AEC setup provided a constant simple pixel SNR for each subject thickness with a high accuracy. SDNRs decreased with an increase in the subject thickness. The calculated dose ratios relative to the results for 20 cm thickness were 0.424, 0.647, and 1.43 for 10, 15 and 25 cm, respectively, and a > 25% decrease in ESD was observed for smaller patients. CDRAD analysis using the modified AEC setup showed almost identical visibility for each thickness. Adjusting the sensitivity of AEC according to subject thickness can contribute toward the optimization of the exposure condition.
- Published
- 2019
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19. Four-dimensional fully convolutional residual network-based liver segmentation in Gd-EOB-DTPA-enhanced MRI.
- Author
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Takenaga T, Hanaoka S, Nomura Y, Nemoto M, Murata M, Nakao T, Miki S, Yoshikawa T, Hayashi N, and Abe O
- Subjects
- Contrast Media, False Positive Reactions, Humans, Liver Neoplasms diagnosis, Neoplasm Metastasis, Reproducibility of Results, Retrospective Studies, Software, Gadolinium DTPA, Image Processing, Computer-Assisted methods, Liver diagnostic imaging, Magnetic Resonance Imaging methods
- Abstract
Purpose: Gadolinium-ethoxybenzyl-diethylenetriamine pentaacetic acid (Gd-EOB-DTPA)-enhanced magnetic resonance imaging (MRI) tends to show higher diagnostic accuracy than other modalities. There is a demand for computer-assisted detection (CAD) software for Gd-EOB-DTPA-enhanced MRI. Segmentation with high accuracy is important for CAD software. We propose a liver segmentation method for Gd-EOB-DTPA-enhanced MRI that is based on a four-dimensional (4D) fully convolutional residual network (FC-ResNet). The aims of this study are to determine the best combination of an input image and output image in our proposed method and to compare our proposed method with the previous rule-based segmentation method., Methods: We prepared a five-phase image set and a hepatobiliary phase image set as the input image sets to determine the best input image set. We also prepared a labeled liver image and labeled liver and labeled body trunk images as the output image sets to determine the best output image set. In addition, we optimized the hyperparameters of our proposed model. We used 30 cases to train our model, 10 cases to determine the hyperparameters of our model, and 20 cases to evaluate our model., Results: Our network with the five-phase image set and the output image set of labeled liver and labeled body trunk images showed the highest accuracy. Our proposed method showed higher accuracy than the previous rule-based segmentation method. The Dice coefficient of the liver region was 0.944 ± 0.018., Conclusion: Our proposed 4D FC-ResNet showed satisfactory performance for liver segmentation as preprocessing in CAD software.
- Published
- 2019
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20. Can the spherical gold standards be used as an alternative to painted gold standards for the computerized detection of lesions using voxel-based classification?
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Nomura Y, Hayashi N, Hanaoka S, Takenaga T, Nemoto M, Miki S, Yoshikawa T, and Abe O
- Subjects
- Brain diagnostic imaging, Datasets as Topic, Humans, Lung diagnostic imaging, Paint, Software, Image Interpretation, Computer-Assisted methods, Image Interpretation, Computer-Assisted standards, Intracranial Aneurysm diagnostic imaging, Magnetic Resonance Angiography methods, Magnetic Resonance Angiography standards, Multiple Pulmonary Nodules diagnostic imaging
- Abstract
Purpose: For the development of computer-assisted detection (CAD) software using voxel-based classification, gold standards defined by pixel-by-pixel painting, called painted gold standards, are desirable. However, for radiologists who define gold standards, a simplified method of definition is desirable. One of the simplest methods of defining gold standards is a spherical region, called a spherical gold standard. In this study, we investigated whether spherical gold standards can be used as an alternative to painted gold standards for computerized detection using voxel-based classification., Materials and Methods: The spherical gold standards were determined by the center of gravity and the maximum diameter. We compared two types of gold standard, painted gold standards and spherical gold standards, by two types of CAD software using voxel-based classification., Results: The time required to paint the area of one lesion was 4.7-6.5 times longer than the time required to define a spherical gold standard. For the same performance of the CAD software, the number of training cases required for the spherical gold standard was 1.6-7.6 times that for the painted gold standards., Conclusion: Spherical gold standards can be used as an alternative to painted gold standards for the computerized detection of lesions with simple shapes.
- Published
- 2019
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21. Feasibility Study of a Generalized Framework for Developing Computer-Aided Detection Systems-a New Paradigm.
- Author
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Nemoto M, Hayashi N, Hanaoka S, Nomura Y, Miki S, and Yoshikawa T
- Subjects
- Feasibility Studies, Female, Humans, Male, Middle Aged, Algorithms, Diagnosis, Computer-Assisted methods, Intracranial Aneurysm diagnostic imaging, Magnetic Resonance Angiography methods, Multiple Pulmonary Nodules diagnostic imaging, Tomography, X-Ray Computed methods
- Abstract
We propose a generalized framework for developing computer-aided detection (CADe) systems whose characteristics depend only on those of the training dataset. The purpose of this study is to show the feasibility of the framework. Two different CADe systems were experimentally developed by a prototype of the framework, but with different training datasets. The CADe systems include four components; preprocessing, candidate area extraction, candidate detection, and candidate classification. Four pretrained algorithms with dedicated optimization/setting methods corresponding to the respective components were prepared in advance. The pretrained algorithms were sequentially trained in the order of processing of the components. In this study, two different datasets, brain MRA with cerebral aneurysms and chest CT with lung nodules, were collected to develop two different types of CADe systems in the framework. The performances of the developed CADe systems were evaluated by threefold cross-validation. The CADe systems for detecting cerebral aneurysms in brain MRAs and for detecting lung nodules in chest CTs were successfully developed using the respective datasets. The framework was shown to be feasible by the successful development of the two different types of CADe systems. The feasibility of this framework shows promise for a new paradigm in the development of CADe systems: development of CADe systems without any lesion specific algorithm designing.
- Published
- 2017
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22. Automatic detection of vertebral number abnormalities in body CT images.
- Author
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Hanaoka S, Nakano Y, Nemoto M, Nomura Y, Takenaga T, Miki S, Yoshikawa T, Hayashi N, Masutani Y, and Shimizu A
- Subjects
- Algorithms, Humans, Models, Anatomic, Models, Statistical, Probability, Lumbar Vertebrae diagnostic imaging, Pattern Recognition, Automated, Radiographic Image Enhancement methods, Thoracic Vertebrae diagnostic imaging, Tomography, X-Ray Computed methods
- Abstract
Purpose: The anatomical anomaly of the number of vertebral bones is one of the major anomalies in the human body, which can cause confusion of the spinal level in, for example, surgery. The aim of this study is to develop an automatic detection system for this type of anomaly., Methods: We utilized our previously reported anatomical landmark detection system for this anomaly detection problem. This system uses a landmark point distribution model (L-PDM) to find multiple landmark positions. The L-PDM is a statistical probabilistic model of all landmark positions in the human body, including five landmarks for each vertebra. Given a new volume, the proposed algorithm applies five hypotheses (normal, 11 or 13 thoracic vertebrae, 4 or 6 lumbar vertebrae) to the given spine and attempts to detect all the landmarks. Then, the most plausible hypothesis with the largest posterior likelihood is selected as the anatomy detection result., Results: The proposed method was evaluated using 300 neck-to-pelvis CT datasets. For normal subjects, the vertebrae of 211/217 (97.2%) of the subjects were successfully determined as normal. For subjects with 23 or 25 vertebrae without a transitional vertebra (TV), the vertebrae of 9/10 (90%) of the subjects were successfully determined. For subjects with TV, the vertebrae of 71/73 (97.3%) of subjects were judged as partially successfully determined., Conclusion: Our algorithm successfully determined the number of vertebrae, and the feasibility of our proposed system was validated.
- Published
- 2017
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23. Landmark-guided diffeomorphic demons algorithm and its application to automatic segmentation of the whole spine and pelvis in CT images.
- Author
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Hanaoka S, Masutani Y, Nemoto M, Nomura Y, Miki S, Yoshikawa T, Hayashi N, Ohtomo K, and Shimizu A
- Subjects
- Cone-Beam Computed Tomography, Humans, Algorithms, Anatomic Landmarks diagnostic imaging, Imaging, Three-Dimensional methods, Pelvic Bones diagnostic imaging, Spine diagnostic imaging
- Abstract
Purpose: A fully automatic multiatlas-based method for segmentation of the spine and pelvis in a torso CT volume is proposed. A novel landmark-guided diffeomorphic demons algorithm is used to register a given CT image to multiple atlas volumes. This algorithm can utilize both grayscale image information and given landmark coordinate information optimally., Methods: The segmentation has four steps. Firstly, 170 bony landmarks are detected in the given volume. Using these landmark positions, an atlas selection procedure is performed to reduce the computational cost of the following registration. Then the chosen atlas volumes are registered to the given CT image. Finally, voxelwise label voting is performed to determine the final segmentation result., Results: The proposed method was evaluated using 50 torso CT datasets as well as the public SpineWeb dataset. As a result, a mean distance error of [Formula: see text] and a mean Dice coefficient of [Formula: see text] were achieved for the whole spine and the pelvic bones, which are competitive with other state-of-the-art methods., Conclusion: From the experimental results, the usefulness of the proposed segmentation method was validated.
- Published
- 2017
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24. Single-energy metal artifact reduction for helical computed tomography of the pelvis in patients with metal hip prostheses.
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Yasaka K, Maeda E, Hanaoka S, Katsura M, Sato J, and Ohtomo K
- Subjects
- Aged, Female, Humans, Male, Metals, Middle Aged, Retrospective Studies, Artifacts, Hip Prosthesis, Image Processing, Computer-Assisted methods, Pelvis diagnostic imaging, Radiographic Image Interpretation, Computer-Assisted methods, Tomography, Spiral Computed methods
- Abstract
Purpose: To compare the quality of helical computed tomography (CT) images of the pelvis in patients with metal hip prostheses reconstructed using adaptive iterative dose reduction (AIDR) and AIDR with single-energy metal artifact reduction (SEMAR-A)., Materials and Methods: This retrospective study included 28 patients (mean age, 64.6 ± 11.4 years; 6 men and 22 women). CT images were reconstructed using AIDR and SEMAR-A. Two radiologists evaluated the extent of metal artifacts and the depiction of structures in the pelvic region and looked for mass lesions. A radiologist placed a region of interest within the bladder and recorded CT attenuation., Results: The metal artifacts were significantly reduced in SEMAR-A as compared to AIDR (p < 0.0001). The depictions of the bladder, ureter, prostate/uterus, rectum, and pelvic sidewall were significantly better with SEMAR-A than with AIDR (p < 0.02). All lesions were diagnosed with SEMAR-A, while some were not diagnosed with AIDR. The median and interquartile range (in parentheses) of CT attenuation within the bladder for AIDR were -34.0 (-46.6 to -15.0) Hounsfield units (HU) and were more variable than those seen for SEMAR-A [5.4 (-1.3 to 11.1)] HU (p = 0.033)., Conclusion: In comparison with AIDR, SEMAR-A provided pelvic CT images of significantly better quality for patients with metal hip prostheses.
- Published
- 2016
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25. Automatic categorization of anatomical landmark-local appearances based on diffeomorphic demons and spectral clustering for constructing detector ensembles.
- Author
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Hanaoka S, Masutani Y, Nemoto M, Nomura Y, Yoshikawa T, Hayashi N, and Ohtomo K
- Subjects
- Humans, Reproducibility of Results, Sensitivity and Specificity, Algorithms, Anatomic Landmarks diagnostic imaging, Pattern Recognition, Automated methods, Radiographic Image Enhancement methods, Radiographic Image Interpretation, Computer-Assisted methods, Subtraction Technique, Tomography, X-Ray Computed methods
- Abstract
A method for categorizing landmark-local appearances extracted from computed tomography (CT) datasets is presented. Anatomical landmarks in the human body inevitably have inter-individual variations that cause difficulty in automatic landmark detection processes. The goal of this study is to categorize subjects (i.e., training datasets) according to local shape variations of such a landmark so that each subgroup has less shape variation and thus the machine learning of each landmark detector is much easier. The similarity between each subject pair is measured based on the non-rigid registration result between them. These similarities are used by the spectral clustering process. After the clustering, all training datasets in each cluster, as well as synthesized intermediate images calculated from all subject-pairs in the cluster, are used to train the corresponding subgroup detector. All of these trained detectors compose a detector ensemble to detect the target landmark. Evaluation with clinical CT datasets showed great improvement in the detection performance.
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- 2012
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26. Radiology reading-caused fatigue and measurement of eye strain with critical flicker fusion frequency.
- Author
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Maeda E, Yoshikawa T, Hayashi N, Akai H, Hanaoka S, Sasaki H, Matsuda I, Yoshioka N, and Ohtomo K
- Subjects
- Adult, Circadian Rhythm, Fatigue physiopathology, Female, Humans, Male, Middle Aged, Sleep Deprivation physiopathology, Surveys and Questionnaires, Vision Disorders physiopathology, Vision Tests, Work Schedule Tolerance, Workload, Fatigue diagnosis, Flicker Fusion, Radiology, Sleep Deprivation diagnosis, Vision Disorders diagnosis
- Abstract
Purpose: The aim of this study was to investigate eye fatigue that could impair diagnostic accuracy by measuring the critical flicker fusion frequency (CFFF) before and after reading., Materials and Methods: CFFF was measured before and after about 4 h of health checkup reading in seven healthy volunteer radiologists. A questionnaire was also completed on duration of sleep the night before the experiment, average duration of sleep, and subjective fatigue using a visual analog scale (corrected to a 0-1 scale, 0 indicating the worst fatigue ever experienced)., Results: After-reading subjective fatigue was significantly greater (before 0.52 ± 0.15, after 0.42 ± 0.15), and CFFF was significantly lower (before 40.9 ± 2.4, after 39.9 ± 2.0). There was no significant correlation between subjective fatigue and CFFF, either before or after or between before- and after-reading differences in subjective fatigue and CFFF. Shorter duration of sleep the night before significantly correlated with lower CFFF (Pearson's correlation coefficient): before 0.42, P = 0.0047; after 0.52, P = 0.0003., Conclusion: CFFF declines after reading and can be considered useful as an indicator of fatigue induced by radiology reading. CFFF declines significantly when sleep is reduced the day before reading without correlation with subjective fatigue, meaning that sleep deprivation can cause an unaware decline in visual function.
- Published
- 2011
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27. 3-D graph cut segmentation with Riemannian metrics to avoid the shrinking problem.
- Author
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Hanaoka S, Fritscher K, Welk M, Nemoto M, Masutani Y, Hayashi N, Ohtomo K, and Schubert R
- Subjects
- Algorithms, Data Interpretation, Statistical, Humans, Models, Statistical, Pattern Recognition, Automated methods, Reproducibility of Results, Spine pathology, Diagnostic Imaging methods, Imaging, Three-Dimensional methods, Radiographic Image Interpretation, Computer-Assisted methods, Tomography, X-Ray Computed methods
- Abstract
Though graph cut based segmentation is a widely-used technique, it is known that segmentation of a thin, elongated structure is challenging due to the "shrinking problem". On the other hand, many segmentation targets in medical image analysis have such thin structures. Therefore, the conventional graph cut method is not suitable to be applied to them. In this study, we developed a graph cut segmentation method with novel Riemannian metrics. The Riemannian metrics are determined from the given "initial contour," so that any level-set surface of the distance transformation of the contour has the same surface area in the Riemannian space. This will ensure that any shape similar to the initial contour will not be affected by the shrinking problem. The method was evaluated with clinical CT datasets and showed a fair result in segmenting vertebral bones.
- Published
- 2011
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28. Adaptive statistical iterative reconstruction for volume-rendered computed tomography portovenography: improvement of image quality.
- Author
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Matsuda I, Hanaoka S, Akahane M, Sato J, Komatsu S, Inoh S, Kiryu S, Yoshioka N, Ino K, and Ohtomo K
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- Adult, Aged, Aged, 80 and over, Contrast Media, Female, Hepatic Veins diagnostic imaging, Humans, Iohexol, Liver blood supply, Liver diagnostic imaging, Liver Neoplasms blood supply, Male, Middle Aged, Observer Variation, Portography, Radiographic Image Enhancement methods, Statistics, Nonparametric, Liver Neoplasms diagnostic imaging, Models, Statistical, Radiographic Image Interpretation, Computer-Assisted methods, Tomography, X-Ray Computed methods
- Abstract
Purpose: Adaptive statistical iterative reconstruction (ASIR) is a reconstruction technique for computed tomography (CT) that reduces image noise. The purpose of our study was to investigate whether ASIR improves the quality of volume-rendered (VR) CT portovenography., Materials and Methods: Institutional review board approval, with waived consent, was obtained. A total of 19 patients (12 men, 7 women; mean age 69.0 years; range 25-82 years) suspected of having liver lesions underwent three-phase enhanced CT. VR image sets were prepared with both the conventional method and ASIR. The required time to make VR images was recorded. Two radiologists performed independent qualitative evaluations of the image sets. The Wilcoxon signed-rank test was used for statistical analysis. Contrast-noise ratios (CNRs) of the portal and hepatic vein were also evaluated., Results: Overall image quality was significantly improved by ASIR (P < 0.0001 and P = 0.0155 for each radiologist). ASIR enhanced CNRs of the portal and hepatic vein significantly (P < 0.0001). The time required to create VR images was significantly shorter with ASIR (84.7 vs. 117.1 s; P = 0.014)., Conclusion: ASIR enhances CNRs and improves image quality in VR CT portovenography. It also shortens the time required to create liver VR CT portovenographs.
- Published
- 2010
- Full Text
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