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Seasonal variations in the microphytobenthic diatom community were investigated in an intertidal sand flat of a tropical marine environment influenced by monsoons. Cores of sediments were collected along the beach gradient: low tide, mid tide and high tide zone up to a depth of 15 cm.. Diatom abundance was lowest during the monsoons and highest during the post-monsoons and the early pre-monsoon season throughout the intertidal transect. Diatom diversity was highest at the mid tide, followed by the high and low tide zones. Diatoms were viable up to a depth of 15 cm throughout the intertidal transect. The diatom community included the pennates, the permanent residents of this area, centric genera, which lead an attached mode of life and also some planktonic genera, brought in from ambient waters. Among the pennates, Navicula and Amphora were the dominant genera whereas in the case of centrics, Thalassiosira dominated the community throughout the intertidal transect down to a 15 cm depth.. Grain size fractions, which served as predictors of some diatom genera changed with tidal zones. The effect of winds on the resuspension of the pennate diatoms was evident only at the low tide zone down to a depth of 5 cm. Chlorophyll a concentration proved to be a good predictor of both pennate and centric diatom abundance at the low tide zone down to a depth of 10 cm and at the mid tide zone down to a depth of 5 cm.. However, even though chlorophyll a concentrations failed to reveal any positive correlation with the diatom abundance at both the deeper sediment layers and the high tide zone, the fact that viable cells were present at these areas reveal that the diatoms adopt survival strategies, contributing significantly to the carbon budgets of such unstable habitats., Introduction Intertidal areas are highly dynamic systems which are constantly influenced by local energy levels and, especially in the case of high energy sand flat areas, exhibit a microstructure governed [...]

The port ecosystems are prone to deterioration due to the maritime and coastal activities and as a major source of the country's economy need efficient management. Phytoplankton communities can serve as reliable indicators of the prevailing environmental conditions due to their short life cycles. Seasonal sampling was conducted at 26 stations from October 2014 to February 2016 at Kandla port situated in a creek, along the west coast of India. The post-monsoon and monsoon water temperatures were higher (30 °C) whereas pre-monsoon were lower (21 °C). The salinity varied from polyhaline (18-30; monsoon) to euhaline (30 to 45; non-monsoon). The strong currents, high tidal activity, shallow depth areas, and the creek backwater systems make this ecosystem well-mixed and turbid. The annual average trophic index (TRIX) scores indicated very good water quality and low eutrophication, except during pre-monsoon (2.3 ± 0.7 to 4.1 ± 0.2). Based on the cell size, the phytoplankton community was classified into two main groups, i.e., nano-microphytoplankton, which comprised forty-seven species (represented by diatoms, dinoflagellates, and silicoflagellates) and picophytoplankton including two groups (picocyanophytes and picoeukaryotes). The diatoms and picophytoplankton dominated the total biomass and cell abundance, respectively. Only the picophytoplankton exhibited significant seasonal variations in cell abundance and carbon biomass. The lowest monsoon phytoplankton abundance coincided with high turbidity and vice versa during the post-monsoon. The hypersaline pre-monsoon environment with lower annual temperature, relatively lower turbid waters, and increased nutrients favoured higher diatom diversity. These conditions also supported potentially harmful Gymnodinium sp. and bloom-forming Tripos furca and Pyrophacus sp. Overall, ten non-toxic but bloom-forming species were observed. The study provides insights into the phytoplankton community's response to environmental conditions that can have repercussions on the ecosystem's functioning., (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

Phytoplankton communities from pelagic systems were assessed to explore the potential of using commonly used traits (such as cell geometry and taxa) as ecological function indicators from the data generated during the winter monsoon in the eastern Arabian Sea (AS). Altogether, data from two oceanic, i.e., convective mixing influenced non-oligotrophic northeastern-AS (NEAS-O) and Rossby wave-influenced oligotrophic southeastern-AS (SEAS-O) and one coastal (NEAS-C) cruises were utilized to decipher the ecological inferences. Overall phytoplankton shapes showed a high level of redundancy by selecting only a few dominant shapes (5 of 22 shapes), though taxonomic diversity was rich (164 species). The taxonomic and morphological approach adopted revealed high species and shape diversity in NEAS-O than in high-abundance NEAS-C and low-abundance SEAS-O. Also, the shape diversity and dominant shapes (cylinder, elliptic-prism, and prism-on-parallelogram) remained the same in oceans than NEAS-C where combined (cylinder + 2 half-sphere) and simple (elliptic-prism) shapes dominated. Additionally, the Rossby-wave front and its reminiscence in SEAS-O and sea-surface-temperature fronts in NEAS-C favored simple and combine shaped phytoplankton, respectively. The morphological properties assessment revealed that the dominant shapes adapted the strategy to conserve the optimal surface-to-volume ratio (S:V) irrespective of changes in greatest-axial-linear-dimension (GALD) in NEAS-O and SEAS-O but not in NEAS-C. However, the dominant shapes in the NEAS-O and SEAS-O opted for high S:V with low GALD and low S:V with high GALD, respectively, while high S:V with no relation with GALD in NEAS-C suggests the prevalence of different adaptive strategies to cope with the respective hydrographic conditions, particularly nutrient availability., (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

This study addresses the seasonal distribution of phytoplankton marker pigments (PMP) and the ratios (indicating freshness and fate) from water and surface sediments from the coastal port ecosystem (Paradip port, Odisha, east coast of India) and its utility in understanding phytoplankton pelagic-benthic linkages. Chlorophyll and PMP (for different groups and degradation) distribution revealed distinct seasonality, but the seasonal trend was different for water and sediments. High and low values were observed in the water column during inter-monsoons (fall/spring) and monsoons (southwest/northeast), respectively, whereas, in sediments, the reverse was recorded. However, the contribution of group-specific PMP was different: fucoxanthin > chlorophyll b > zeaxanthin > alloxanthin > peridinin dominated in water and chlorophyll b > zeaxanthin > fucoxanthin > alloxanthin > peridinin in sediment. Selective grazing and stability of sedimentary PMP (fucoxanthin, diatoms PMP, is least stable than other groups) could contribute to such differences. Relatively high chlorophyll:pheopigment ratios in the water and low pheophorbide: pheophytin in sediments indicated the dominance of actively growing microalgae and chlorophyll degradation via chlorophyllidae pathway in the water but not in sediments. These findings suggest that (i) much of the phytoplankton (primarily diatoms) is lost due to herbivory before reaching bottom sediments, and (ii) pigment contribution is determined by selective grazing in water and PMP decay constants in sediments. Documenting such information will give new insights into ecosystem assessment and algal bloom research., (© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

The phytoplankton community structure exhibits seasonal and spatial variations in response to the environmental conditions, which aids in understanding the ecosystem's health. Given this, four samplings were conducted between October 2013 to April 2015, encompassing the monsoon, post-monsoon, and pre-monsoon seasons, from the Haldia port ecosystem of India. The samples were collected from the flowing estuary and an extended semi-enclosed dock. We hypothesized that the seasonal phytoplankton community (diversity, abundance, and carbon biomass) response will differ based on the environmental and hydrographical characteristics of the study site. Picophytoplankton and nano-microphytoplankton dominated the phytoplankton community in terms of numbers and biomass, respectively. Bacillariophytes dominated the nano-microphytoplankton abundance and total biomass, except during the monsoon when Dinophytes contributed (inner-zone). The dominance of Bacillariophytes and Chlorophytes in the outer-zone with picophytoplankton and Dinophytes in the inner-zone indicated group-specific hydrographic preferences that supported the hypothesis. The positive correlation of the picophytoplankton abundance (pre-monsoon) with Secchi disc depth and the negative correlation of diatoms (post-monsoon) with temperature signify the seasonal role of light and temperature, respectively. The highest nano-microphytoplankton species diversity (Shannon-Wiener's index) during the pre-monsoon (inner-zone) with more rare species indicated the probable influence of stable waters with increased water transparency. However, the community was unevenly distributed in the estuary due to the high abundance of the diatom, Aulacoseira granulata. Although harmful algal blooms were not detected, the higher temperature and nutrient concentrations could have favoured potentially harmful species (Pseudonitzschia delicatissima, Dinophysis acuta) during the monsoon. The system ranged from oligo- to mesotrophic state with moderate pollution levels (Carlson's Trophic State Index and Shannon's Index), indicating a reduction of the nutrient accumulation effects by the existing water renewal frequency. This study recommends incorporating qualitative and quantitative phytoplankton assessment in ecological monitoring of the stable coastal sites to prevent future harmful algal episodes., (© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

Bivalves are benthic organisms inhabiting coastal marine habitats, especially estuarine tidal and mudflats. Due to their high stocking density and rich protein content, they form a major part of the artisanal fishery resource around the world. A clear partitioning in the population of bivalves, Paphia malabarica (Chemnitz, 1782), and Meretrix casta (Gmelin, 1791) in southern (Chicalim) and northern (Siridao) bank of a tropical Zuari estuary influenced by the monsoon along the Indian west coast, is evidenced. This study unravels the reasons for their partitioning in this estuary. Paphia malabarica is an exclusive inhabitant of Chicalim which has silty-sandy sediment, whereas M. casta is exclusive to Siridao, a sandy habitat. Observations showed that this segregation is facilitated by the semi-enclosed nature of habitat at Chicalim with the high amount of degraded and aged sediment organic carbon, high chlorophyll a, elemental, and biochemical components, whereas Siridao experiences the high impact of tidal currents, low sediment organic carbon, and high water column chlorophyll a. The habitat in Siridao gets exposed to UV radiation during low tide, reducing the photosynthetic oxygen production, turning the habitat to periodic anoxia indicated by differences in the TOC:TS ratio. However, such conditions may not influence M. casta, which can derive oxygen from the water column. The fatty acids specific to diatoms, dinoflagellates, higher plants, and partially degraded organic matter in the tissues of P. malabarica indicate their ability to source the food from the sediment and water column, whereas in tissues of M. casta, higher dinoflagellate-specific fatty acids followed by diatom and bacteria indicate water column-derived food. Chicalim can be considered an actively coupled benthic-pelagic habitat, and Siridao as an uncoupled habitat. Thus, the diverse flux of food particles, species-specific feeding ecology, and local hydrodynamics operating at these habitats could be the determining factors in the partitioning of the bivalves. Graphical abstract .

Seasonal and spatial phytoplankton distribution in relation to environmental factors was investigated in New Mangalore Port, a major port along the west coast of India. A well-mixed water column characterized the non-monsoon seasons, whereas it was weakly stratified during monsoon. Water quality index (TRIX) scores indicated good water quality except during pre-monsoon (inner zone surface) and monsoon (near bottom waters). Surface abundance of tychopelagic diatoms (Paralia sulcata, Melosira nummuloides, Cylindrotheca closterium, and Nitzschia sigma) was higher during non-monsoon seasons. Certain centric diatoms, e.g., Leptocylindrus danicus, P. sulcata, and Rhizosolenia imbricata, dominated during pre-monsoon (inner zone) and positively correlated with TRIX. High Skeletonema costatum and dinoflagellate abundance during the monsoon season coincided with high nutrient concentrations. Five potential toxic and fourteen harmful/bloom forming algal species were encountered at abundances below the level that can be considered as harmful to the ecosystem. In addition to a baseline database, this study highlights the potential use of certain diatom species as indicators of hydrography and water quality for monitoring dynamic coastal marine ecosystems.

The influence of tides on bacterial populations in a monsoon influenced tropical estuary was assessed through fine resolution sampling (1 to 3 h) during spring and neap tides from mouth to the freshwater end at four stations during pre-monsoon, monsoon and post-monsoon seasons. Higher abundance of total bacterial count (TBC) in surface water near the river mouth, compared to the upstream, during pre-monsoon was followed by an opposite scenario during the monsoon When seasonally compared, it was during the post-monsoon season when TBC in surface water was highest, with simultaneous decrease in their count in the river sediment. The total viable bacterial count (TVC) was influenced by the depth-wise stratification of salinity, which varied with tidal fluctuation, usually high and low during the neap and spring tides respectively. The abundance of both the autochthonous Vibrio spp. and allochthonous coliform bacteria was influenced by the concentrations of dissolved nutrients and suspended particulate matter (SPM). It is concluded that depending on the interplay of riverine discharge and tidal amplitude, sediment re-suspension mediated increase in SPM significantly regulates bacteria populations in the estuarine water, urging the need of systematic regular monitoring for better prediction of related hazards, including those associated with the rise in pathogenic Vibrio spp. in the changing climatic scenarios.

Bacteria associated with plankton are of importance in marine bioinvasions and the implementation of ship's ballast water treatment technologies. In this study, epibiotic and endobiotic bacteria associated with zooplankton, including barnacle nauplii, veliger larvae, and adults of the copepod Oithona sp., were characterized and quantified. Barnacle nauplius and veliger larva harbored ~4.4 × 10(5)cells ind(-1) whereas Oithona sp. had 8.8 × 10(5)cells ind(-1). Computation of bacterial contribution based on biovolume indicated that despite being the smallest zooplankton tested, veliger larvae harbored the highest number of bacteria, while barnacle nauplii, the largest of the zooplankton, tested in terms of volume contributed the least. Pulverization of zooplankton led to an increase in bacterial numbers; for example, Vibrio cholerae, which was initially 3.5 × 10(3), increased to 5.4 × 10(5)CFU g(-1); Escherichia coli increased from 5.0 × 10(2) to 1.3 × 10(4)CFU g(-1); and Streptococcus faecalis increased from 2.1 × 10(2) to 2.5 × 10(5)CFU g(-1), respectively. Pulverized zooplankton was aged in the dark to assess the contribution of bacteria from decaying debris. Aging of pulverized zooplankton led to emergence of Chromobacterium violaceum, which is an opportunistic pathogen in animals and humans.

Harmful algal blooms (HABs) have been documented along the coasts of India and the ill effects felt by society at large. Most of these reports are from the Arabian Sea, west coast of India, whereas its counterpart, the Bay of Bengal (BOB), has remained unexplored in this context. The unique characteristic features of the BOB, such as large amount of riverine fresh water discharges, monsoonal clouds, rainfall, and weak surface winds make the area strongly stratified. In this study, 19 potentially harmful species which accounted for approximately 14% of the total identified species (134) of dinoflagellates were encountered in surface waters of the BOB during November 2003 to September 2006. The variations in species abundance could be attributed to the seasonal variations in the stratification observed in the BOB. The presence of frequently occurring HAB species in low abundance (≤ 40 cell L( -1)) in stratified waters of the BOB may not be a growth issue. However, they may play a significant role in the development of pelagic seed banks, which can serve as inocula for blooms if coupled with local physical processes like eddies and cyclones. The predominance of Ceratium furca and Noctiluca scintillans, frequently occurring HAB species during cyclone-prone seasons, point out their candidature for HABs.

In a monsoon-affected tropical estuary, oscillations in freshwater discharge during monsoon shifted the phytoplankton blooms from those adapted to low salinities to high salinities and vice versa. Salinity stratification during monsoon (onset and restart after an intermittent break) favored diatom (Skeletonema) bloom in low-saline surface waters. In high-saline, nutrient-rich bottom waters, Fragilariopsis (diatom) bloom was observed during onset of monsoon and persisted till the end of monsoon. The break period in monsoon altered the phytoplankton community leading to mixed species bloom of large-sized diatoms and harmful dinoflagellates (Gymnodinium catenatum and Cochlodinium polykrikoides) under high-saline, nutrient-poor, non-stratified, and transparent water column. Such variations in community should be considered for better understanding the biogeochemistry of monsoon-influenced tropical estuaries. The dominance of Skeletonema is determined positively by the extent of low-saline stratified condition whereas most of the observed taxa were favored by high-saline, nutrient-poor, and transparent waters.

Zooplankton abundance, biomass, and composition from the ports of Mumbai, India, were studied by selecting 14 stations in and around the area during three different periods between 2001 and 2002 (Nov 01, Apr 02, and Oct 02). The results are compared with the records available since the 1940s. Copepod species such as Canthocalanus sp., Paracalanus arabiensis, Cosmocalanus sp., Euterpina acutifrons, Nannocalanus minor, and Tortanus sp. which were not reported in the earlier studies were observed during the present investigation. Purely herbivorous forms like Nannocalanus minor, Paracalanus sp., and Temora discaudata were in reduced abundance during Apr 02 sampling which was coupled with reduction in the diatom population. Whereas increased abundance of some carnivorous and omnivorous forms during Apr 02 sampling can be related to the changes in the food web dynamics.