10 results on '"Cooke CA"'
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2. Mitotic chromosomes are compacted laterally by KIF4 and condensin and axially by topoisomerase IIα.
- Author
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Samejima K, Samejima I, Vagnarelli P, Ogawa H, Vargiu G, Kelly DA, de Lima Alves F, Kerr A, Green LC, Hudson DF, Ohta S, Cooke CA, Farr CJ, Rappsilber J, and Earnshaw WC
- Subjects
- Adenosine Triphosphatases genetics, Animals, Chickens, Chromatids metabolism, DNA-Binding Proteins genetics, Kinesins genetics, Multiprotein Complexes genetics, Mutation, Nuclear Proteins genetics, Tumor Cells, Cultured, Adenosine Triphosphatases metabolism, Antigens, Neoplasm metabolism, Chromosomes metabolism, DNA Topoisomerases, Type II metabolism, DNA-Binding Proteins metabolism, Kinesins metabolism, Mitosis, Multiprotein Complexes metabolism, Nuclear Proteins metabolism
- Abstract
Mitotic chromosome formation involves a relatively minor condensation of the chromatin volume coupled with a dramatic reorganization into the characteristic "X" shape. Here we report results of a detailed morphological analysis, which revealed that chromokinesin KIF4 cooperated in a parallel pathway with condensin complexes to promote the lateral compaction of chromatid arms. In this analysis, KIF4 and condensin were mutually dependent for their dynamic localization on the chromatid axes. Depletion of either caused sister chromatids to expand and compromised the "intrinsic structure" of the chromosomes (defined in an in vitro assay), with loss of condensin showing stronger effects. Simultaneous depletion of KIF4 and condensin caused complete loss of chromosome morphology. In these experiments, topoisomerase IIα contributed to shaping mitotic chromosomes by promoting the shortening of the chromatid axes and apparently acting in opposition to the actions of KIF4 and condensins. These three proteins are major determinants in shaping the characteristic mitotic chromosome morphology.
- Published
- 2012
- Full Text
- View/download PDF
3. Transition from caspase-dependent to caspase-independent mechanisms at the onset of apoptotic execution.
- Author
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Samejima K, Toné S, Kottke TJ, Enari M, Sakahira H, Cooke CA, Durrieu F, Martins LM, Nagata S, Kaufmann SH, and Earnshaw WC
- Subjects
- Animals, Aphidicolin pharmacology, Apoptosis Regulatory Proteins, Cell Cycle drug effects, Cell Cycle physiology, Cell Line, Cell Nucleus physiology, Chickens, Cysteine Proteinase Inhibitors pharmacology, Cytoplasm physiology, Enzyme Activation, HeLa Cells, Humans, Laminin metabolism, Mutagenesis, Site-Directed, Nocodazole pharmacology, Poly(ADP-ribose) Polymerases metabolism, Protein Biosynthesis, Proteins metabolism, Recombinant Proteins biosynthesis, Recombinant Proteins metabolism, Apoptosis physiology, Caspases metabolism
- Abstract
We have compared cytoplasmic extracts from chicken DU249 cells at various stages along the apoptotic pathway. Extracts from morphologically normal "committed stage" cells induce apoptotic morphology and DNA cleavage in substrate nuclei but require ongoing caspase activity to do so. In contrast, extracts from frankly apoptotic cells induce apoptotic events in added nuclei in a caspase-independent manner. Biochemical fractionation of these extracts reveals that a column fraction enriched in endogenous active caspases is unable to induce DNA fragmentation or chromatin condensation in substrate nuclei, whereas a caspase-depleted fraction induces both changes. Further characterization of the "execution phase" extracts revealed the presence of an ICAD/DFF45 (inhibitor of caspase-activated DNase/DNA fragmentation factor)- inhibitable nuclease resembling CAD, plus another activity that was required for the apoptotic chromatin condensation. Despite the presence of active caspases, committed stage extracts lacked these downstream activities, suggesting that the caspases and downstream factors are segregated from one another in vivo during the latent phase. These observations not only indicate that caspases act in an executive fashion, serving to activate downstream factors that disassemble the nucleus rather than disassembling it themselves, but they also suggest that activation of the downstream factors (rather than the caspases) is the critical event that occurs at the transition from the latent to active phase of apoptosis.
- Published
- 1998
- Full Text
- View/download PDF
4. CENP-C is required for maintaining proper kinetochore size and for a timely transition to anaphase.
- Author
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Tomkiel J, Cooke CA, Saitoh H, Bernat RL, and Earnshaw WC
- Subjects
- Autoantigens physiology, Cell Cycle, HeLa Cells, Humans, In Vitro Techniques, Anaphase, Centromere ultrastructure, Chromosomal Proteins, Non-Histone physiology, Metaphase
- Abstract
The human autoantigen CENP-C has been demonstrated by immunoelectron microscopy to be a component of the inner kinetochore plate. Here we have used antibodies raised against various portions of CENP-C to probe its function in mitosis. We show that nuclear microinjection of anti-CENP-C antibodies during interphase causes a transient arrest at the following metaphase. Injection of the same antibodies after the initiation of prophase, however, does not disrupt mitosis. Correspondingly, indirect immunofluorescence using affinity-purified human anti-CENP-C antibodies reveals that levels of CENP-C staining are reduced at centromeres in cells that were injected during interphase, but appear unaffected in cells which were injected during mitosis. Thus, we suggest that the injected antibodies cause metaphase arrest by reducing the amount of CENP-C at centromeres. Examination of kinetochores in metaphase-arrested cells by electron microscopy reveals that the number of trilaminar structures is reduced. More surprisingly, the few remaining kinetochores in these cells retain a normal trilaminar morphology but are significantly reduced in diameter. In cells arrested for extended periods, these small kinetochores become disrupted and apparently no longer bind microtubules. These observations are consistent with an involvement of CENP-C in kinetochore assembly, and suggest that CENP-C plays a critical role in both establishing and/or maintaining proper kinetochore size and stabilizing microtubule attachments. These findings also support the idea that proper assembly of kinetochores may be monitored by the cell cycle checkpoint preceding the transition to anaphase.
- Published
- 1994
- Full Text
- View/download PDF
5. Nuclear events of apoptosis in vitro in cell-free mitotic extracts: a model system for analysis of the active phase of apoptosis.
- Author
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Lazebnik YA, Cole S, Cooke CA, Nelson WG, and Earnshaw WC
- Subjects
- Animals, Aphidicolin pharmacology, Apoptosis drug effects, Cell Fractionation, Cell Nucleus drug effects, Cell Nucleus ultrastructure, Cell-Free System, Chickens, Chromosomes, DNA Damage drug effects, HeLa Cells, Humans, Mice, Nuclear Envelope metabolism, Nucleosomes metabolism, Protamine Kinase metabolism, S Phase, Tumor Cells, Cultured, Zinc pharmacology, Apoptosis physiology, Cell Nucleus physiology, DNA Damage physiology, Mitosis physiology
- Abstract
We have developed a cell-free system that induces the morphological transformations characteristic of apoptosis in isolated nuclei. The system uses extracts prepared from mitotic chicken hepatoma cells following a sequential S phase/M phase synchronization. When nuclei are added to these extracts, the chromatin becomes highly condensed into spherical domains that ultimately extrude through the nuclear envelope, forming apoptotic bodies. The process is highly synchronous, and the structural changes are completed within 60 min. Coincident with these morphological changes, the nuclear DNA is cleaved into a nucleosomal ladder. Both processes are inhibited by Zn2+, an inhibitor of apoptosis in intact cells. Nuclear lamina disassembly accompanies these structural changes in added nuclei, and we show that lamina disassembly is a characteristic feature of apoptosis in intact cells of mouse, human and chicken. This system may provide a powerful means of dissecting the biochemical mechanisms underlying the final stages of apoptosis.
- Published
- 1993
- Full Text
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6. Mapping DNA within the mammalian kinetochore.
- Author
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Cooke CA, Bazett-Jones DP, Earnshaw WC, and Rattner JB
- Subjects
- Animals, Cell Line, Deer, Deoxyribonucleases metabolism, In Vitro Techniques, Microscopy, Electron, Osmium chemistry, Saccharomyces cerevisiae ultrastructure, Staining and Labeling, Centromere ultrastructure, Chromosomes ultrastructure, DNA metabolism, Spindle Apparatus ultrastructure
- Abstract
The location of the cis-acting DNA sequences that direct the assembly of the mammalian kinetochore is not known. A variety of circumstantial evidence, however, has led to the widespread belief that they are present throughout the kinetochore including the kinetochore outer plate. To investigate this question directly, we have used two independent methods to localize DNA in and around the mammalian kinetochore. Both methods fail to reveal DNA in the outer kinetochore plate, finding instead that the outer-most detectable DNA in the centromere is located in the inner kinetochore plate. Our results imply that the outer kinetochore plate is primarily a proteinaceous structure. It is thus unlikely that fibers observed in the outer plate correspond to chromatin, as previously assumed. Our observations suggest that current models of kinetochore structure may need to be reconsidered.
- Published
- 1993
- Full Text
- View/download PDF
7. Compartmentalization within the nucleus: discovery of a novel subnuclear region.
- Author
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Saunders WS, Cooke CA, and Earnshaw WC
- Subjects
- Animals, Autoantigens immunology, Cell Cycle, Cell Nucleus immunology, Cells, Cultured, Cloning, Molecular, DNA analysis, Fluorescent Antibody Technique, HeLa Cells, Humans, Immune Sera, Microscopy, Immunoelectron, Polymorphism, Genetic, Rabbits, Cell Compartmentation, Cell Nucleus ultrastructure
- Abstract
Antibodies to a set of structurally related autoantigens (p23-25) bind to a previously uncharacterized, large structural domain in the nucleus of a variety of human cell types. This subnuclear domain is visible by phase contrast alone as a region of decreased density after several different fixation protocols. The morphology of this region changes dramatically during the cell cycle and we have given it the name PIKA (for polymorphic interphase karyosomal association) based on preliminary evidence that the PIKA proteins may be associated with chromatin. The function of the PIKA is not yet known, but our immunolocalization data indicate that it is unlikely to be associated with regions of ongoing DNA replication, heterogeneous nuclear RNA storage, or mRNA processing. The discovery of the PIKA provides evidence supporting an emerging model of nuclear structure. It now appears that the nucleus is organized into distinct domains which include not only the nucleolus, but also previously unidentified regions such as the PIKAs. Furthermore, structural rearrangements undergone by the nucleolus and the PIKAs may be indicative of a broad tendency for nuclear organization to change in a cell cycle-specific fashion.
- Published
- 1991
- Full Text
- View/download PDF
8. CENP-B: a major human centromere protein located beneath the kinetochore.
- Author
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Cooke CA, Bernat RL, and Earnshaw WC
- Subjects
- Autoantibodies, Centromere immunology, Centromere ultrastructure, Centromere Protein B, HeLa Cells, Heterochromatin analysis, Humans, Immunohistochemistry, Interphase, Microscopy, Electron, Mitosis physiology, Permeability, Autoantigens, Centromere analysis, Chromosomal Proteins, Non-Histone analysis, Chromosomes analysis, DNA-Binding Proteins
- Abstract
The family of three structurally related autoantigens CENP-A (17 kD), CENP-B (80 kD), and CENP-C (140 kD) are the best characterized components of the human centromere, and they have been widely assumed to be components of the kinetochore. Kinetochore components are currently of great interest since this structure, which has long been known to be the site of microtubule attachment to the chromosome, is now believed to be a site of force production for anaphase chromosome movement. In the present study we have mapped the distribution of CENP-B in mitotic chromosomes by immunoelectron microscopy using two monospecific polyclonal antibodies together with a newly developed series of ultra-small 1-nm colloidal gold probes. We were surprised to find that greater than 95% of CENP-B is distributed throughout the centromeric heterochromatin beneath the kinetochore. This strongly supports other emerging evidence that CENP-B is specifically associated with alpha-satellite heterochromatin. Although in certain instances CENP-B can be seen to be concentrated immediately adjacent to the lower surface of the kinetochore, the outer plate remains virtually unlabeled. Similar analysis with a human autoimmune serum that recognizes all three CENP antigens reveals an additional unsuspected feature of kinetochore structure. In addition to recognizing antigens in the centromeric heterochromatin, the autoantiserum recognizes a concentration of antigens lateral to the kinetochore. This difference in staining pattern may reflect the presence of a "collar" of chromatin rich in CENP-C and/or CENP-A encircling the kinetochore plates.
- Published
- 1990
- Full Text
- View/download PDF
9. Topoisomerase II is a structural component of mitotic chromosome scaffolds.
- Author
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Earnshaw WC, Halligan B, Cooke CA, Heck MM, and Liu LF
- Subjects
- Animals, Cell Fractionation, Cell Nucleus ultrastructure, Chickens, Chromosomes ultrastructure, DNA Topoisomerases, Type I immunology, Interphase, Molecular Weight, Chromosomes enzymology, DNA Topoisomerases, Type I metabolism, Mitosis
- Abstract
We have obtained a polyclonal antibody that recognizes a major polypeptide component of chicken mitotic chromosome scaffolds. This polypeptide migrates in SDS PAGE with Mr 170,000. Indirect immunofluorescence and subcellular fractionation experiments confirm that it is present in both mitotic chromosomes and interphase nuclei. Two lines of evidence suggest that this protein is DNA topoisomerase II, an abundant nuclear enzyme that controls DNA topological states: anti-scaffold antibody inhibits the strand-passing activity of DNA topoisomerase II; and both anti-scaffold antibody and an independent antibody raised against purified bovine topoisomerase II recognize identical partial proteolysis fragments of the 170,000-mol-wt scaffold protein in immunoblots. Our results suggest that topoisomerase II may be an enzyme that is also a structural protein of interphase nuclei and mitotic chromosomes.
- Published
- 1985
- Full Text
- View/download PDF
10. The inner centromere protein (INCENP) antigens: movement from inner centromere to midbody during mitosis.
- Author
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Cooke CA, Heck MM, and Earnshaw WC
- Subjects
- Anaphase, Antibodies, Monoclonal, Antigens, Nuclear, Cell Line, Fluorescent Antibody Technique, Metaphase, Mitosis, Nuclear Proteins immunology, Centromere ultrastructure, Chromosomes ultrastructure, Nuclear Proteins physiology
- Abstract
We describe a novel set of polypeptide antigens that shows a dramatic change in structural localization during mitosis. Through metaphase these antigens define a new chromosomal substructure that is located between the sister chromatids. Because the antigens are concentrated in the pericentromeric region, we have provisionally termed them the INCENPs (inner centromere proteins). The INCENPs (two polypeptides of 155 and 135 kD) were identified with a monoclonal antibody that was raised against the bulk proteins of the mitotic chromosome scaffold fraction. These two polypeptides are the most tightly bound chromosomal proteins known. When scaffolds are prepared, 100% of the detectable INCENPs remain scaffold associated. We were therefore unprepared for the fate of the INCENPs at anaphase. As the sister chromatids separate, the INCENPs dissociate fully from them, remaining behind at the metaphase plate as the chromatids migrate to the spindle poles. During anaphase the INCENPs are found on coarse fibers in the central spindle, and also in close apposition to the cell membrane in the region of the forming contractile ring. During telophase, the INCENPs gradually become focused onto the forming midbody, together with which they are ultimately discarded. Several possible in vivo roles for the INCENPs are suggested by these data: regulation of sister chromatid pairing, stabilization of the plane of cleavage, and separation of spindle poles at anaphase.
- Published
- 1987
- Full Text
- View/download PDF
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