8 results on '"Rivas, Susana"'
Search Results
2. Detection and functional characterization of a 215 amino acid n-terminal extension in the xanthomonas type III effector XopD
- Author
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Arechaga, Ignacio, Rivas, Susana, Arechaga, Ignacio, and Rivas, Susana
- Abstract
During evolution, pathogens have developed a variety of strategies to suppress plant-triggered mmunity and promote successful infection. In Gram-negative phytopathogenic bacteria, the so- alled type III protein secretion system works as a molecular syringe to inject type III effectors (T3Es) into plant cells. The XopD T3E from the strain 85-10 of Xanthomonas campestris pathovar vesicatoria (Xcv) delays the onset of symptom development and alters basal defence responses to promote pathogen growth in infected tomato leaves. XopD was previously described as a modular protein that contains (i) an N-terminal DNA-binding domain (DBD), (II) two tandemly repeated EAR (ERF-associated amphiphillic repression) motifs involved in transcriptional repression, and (iii) a C-terminal cysteine protease domain, involved in release of SUMO (small ubiquitin-like modifier) from SUMO-modified proteins. Here, we show that the XopD protein hat is produced and secreted by Xcv presents an additional N-terminal extension of 215 amino acids. Closer analysis of this newly identified N-terminal domain shows a low complexity region rich in lysine, alanine and glutamic acid residues (KAE-rich) with high propensity to form coiled-coil structures that confers to XopD the ability to form dimers when expressed in E. coli. The full length XopD protein identified in this study (XopD1-760) displays stronger repression of the opD plant target promoter PR1, as compared to the XopD version annotated in the public databases (XopD216-760). Furthermore, the N-terminal extension of XopD, which is absent in XopD216-760, is essential for XopD type III-dependent secretion and, therefore, for complementation of an Xcv mutant strain deleted from XopD in its ability to delay symptom development in tomato susceptible cultivars. The identification of the complete sequence of XopD opens new erspectives for future studies on the XopD protein and its virulence-associated functions in planta. © 2010 Canonne et al.
- Published
- 2010
3. The H-ATOMIC Criteria for the Etiologic Classification of Patients with Intracerebral Hemorrhage.
- Author
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Martí-Fàbregas, Joan, Prats-Sánchez, Luis, Martínez-Domeño, Alejandro, Camps-Renom, Pol, Marín, Rebeca, Jiménez-Xarrié, Elena, Fuentes, Blanca, Dorado, Laura, Purroy, Francisco, Arias-Rivas, Susana, and Delgado-Mederos, Raquel
- Subjects
CEREBRAL hemorrhage ,ETIOLOGY of diseases ,NOSOLOGY ,HYPERTENSION ,CEREBRAL amyloid angiopathy ,ANTICOAGULANTS - Abstract
Background and Purpose: There are no generally accepted criteria for the etiologic classification of intracerebral hemorrhage (ICH). For this reason, we have developed a set of etiologic criteria and have applied them to a large number of patients to determine their utility. Methods: The H-ATOMIC classification includes 7 etiologic categories: Hypertension, cerebral Amyloid angiopathy, Tumour, Oral anticoagulants, vascular Malformation, Infrequent causes and Cryptogenic. For each category, the etiology is scored with three degrees of certainty: Possible
(3) , Probable(2) and Definite(1) . Our aim was to perform a basic study consisting of neuroimaging, blood tests, and CT-angio when a numerical score (SICH) suggested an underlying structural abnormality. Combinations of >1 etiologic category for an individual patient were acceptable. The criteria were evaluated in a multicenter and prospective study of consecutive patients with spontaneous ICH. Results: Our study included 439 patients (age 70.8 ± 14.5 years; 61.3% were men). A definite etiology was achieved in 176 (40.1% of the patients: Hypertension 28.2%, cerebral Amyloid angiopathy 0.2%, Tumour 0.2%, Oral anticoagulants 2.2%, vascular Malformation 4.5%, Infrequent causes 4.5%). A total of 7 patients (1.6%) were cryptogenic. In the remaining 58.3% of the patients, ICH was attributable to a single (n = 56, 12.7%) or the combination of ≥2 (n = 200, 45.5%) possible/probable etiologies. The most frequent combinations of etiologies involved possible hypertension with possible CAA (H3 A3 , n = 38) or with probable CAA (H3 A2 , n = 29), and probable hypertension with probable OA (H2 O2 , n = 27). The most frequent category with any degree of certainty was hypertension (H1+2+3 = 80.6%) followed by cerebral amyloid angiopathy (A1+2+3 = 30.9%). Conclusions: According to our etiologic criteria, only about 40% patients received a definite diagnosis, while in the remaining patients ICH was attributable to a single possible/probable etiology or to more than one possible/probable etiology. The use of these criteria would likely help in the management of patients with ICH. [ABSTRACT FROM AUTHOR]- Published
- 2016
- Full Text
- View/download PDF
4. An Atypical Kinase under Balancing Selection Confers Broad-Spectrum Disease Resistance in Arabidopsis.
- Author
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Huard-Chauveau, Carine, Perchepied, Laure, Debieu, Marilyne, Rivas, Susana, Kroj, Thomas, Kars, Ilona, Bergelson, Joy, Roux, Fabrice, and Roby, Dominique
- Subjects
DISEASE resistance of plants ,GENES ,PLANT genetics ,CLONING ,PLANT cloning - Abstract
The failure of gene-for-gene resistance traits to provide durable and broad-spectrum resistance in an agricultural context has led to the search for genes underlying quantitative resistance in plants. Such genes have been identified in only a few cases, all for fungal or nematode resistance, and encode diverse molecular functions. However, an understanding of the molecular mechanisms of quantitative resistance variation to other enemies and the associated evolutionary forces shaping this variation remain largely unknown. We report the identification, map-based cloning and functional validation of QRX3 (RKS1, Resistance related KinaSe 1), conferring broad-spectrum resistance to Xanthomonas campestris (Xc), a devastating worldwide bacterial vascular pathogen of crucifers. RKS1 encodes an atypical kinase that mediates a quantitative resistance mechanism in plants by restricting bacterial spread from the infection site. Nested Genome-Wide Association mapping revealed a major locus corresponding to an allelic series at RKS1 at the species level. An association between variation in resistance and RKS1 transcription was found using various transgenic lines as well as in natural accessions, suggesting that regulation of RKS1 expression is a major component of quantitative resistance to Xc. The co-existence of long lived RKS1 haplotypes in A. thaliana is shared with a variety of genes involved in pathogen recognition, suggesting common selective pressures. The identification of RKS1 constitutes a starting point for deciphering the mechanisms underlying broad spectrum quantitative disease resistance that is effective against a devastating and vascular crop pathogen. Because putative RKS1 orthologous have been found in other Brassica species, RKS1 provides an exciting opportunity for plant breeders to improve resistance to black rot in crops. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
5. Detection and Functional Characterization of a 215 Amino Acid N-Terminal Extension in the Xanthomonas Type III Effector XopD.
- Author
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Canonne, Joanne, Marino, Daniel, Noël, Laurent D., Arechaga, Ignacio, Pichereaux, Carole, Rossignol, Michel, Roby, Dominique, and Rivas, Susana
- Subjects
XANTHOMONAS ,AMINO acids ,SODIUM ,HEART ,LABORATORY rabbits ,MUSCLE cells ,ACTION potentials ,PSEUDOMONADACEAE ,BIOLOGY - Abstract
Background: The SCN5A encoded sodium current (I
Na ) generates the action potential (AP) upstroke and is a major determinant of AP characteristics and AP propagation in cardiac myocytes. Unfortunately, in cardiac myocytes, investigation of kinetic properties of INa with near-physiological ion concentrations and temperature is technically challenging due to the large amplitude and rapidly activating nature of INa , which may seriously hamper the quality of voltage control over the membrane. We hypothesized that the alternating voltage clamp-current clamp (VC/CC) technique might provide an alternative to traditional voltage clamp (VC) technique for the determination of INa properties under physiological conditions. Principal Findings: We studied INa under close-to-physiological conditions by VC technique in SCN5A cDNA-transfected HEK cells or by alternating VC/CC technique in both SCN5A cDNA-transfected HEK cells and rabbit left ventricular myocytes. In these experiments, peak INa during a depolarizing VC step or maximal upstroke velocity, dV/dtmax , during VC/CC served as an indicator of available INa . In HEK cells, biophysical properties of INa , including current density, voltage dependent (in)activation, development of inactivation, and recovery from inactivation, were highly similar in VC and VC/CC experiments. As an application of the VC/CC technique we studied INa in left ventricular myocytes isolated from control or failing rabbit hearts. Conclusions: Our results demonstrate that the alternating VC/CC technique is a valuable experimental tool for INa measurements under close-to-physiological conditions in cardiac myocytes. [ABSTRACT FROM AUTHOR]- Published
- 2010
- Full Text
- View/download PDF
6. Retraction: Detection and Functional Characterization of a 215 Amino Acid N-Terminal Extension in the Xanthomonas Type III Effector XopD.
- Author
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Canonne, Joanne, Marino, Daniel, Noël, Laurent D., Arechaga, Ignacio, Pichereaux, Carole, Rossignol, Michel, Roby, Dominique, and Rivas, Susana
- Subjects
XANTHOMONAS ,AMINO acids ,N-terminal residues - Published
- 2018
- Full Text
- View/download PDF
7. Detection and Functional Characterization of a 215 Amino Acid N-Terminal Extension in the Xanthomonas Type III Effector XopD
- Author
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Carole Pichereaux, Daniel Marino, Ignacio Arechaga, Joanne Canonne, Laurent D. Noël, Susana Rivas, Michel Rossignol, Dominique Roby, Unité mixte de recherche interactions plantes-microorganismes, Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, Departamento de Biología Molecular, Instituto de Biomedicina y Biotecnología de Cantabria, Partenaires INRAE, Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées, Marino, Daniel, Noel, Laurent, and Rivas, Susana
- Subjects
0106 biological sciences ,lcsh:Medicine ,ComputingMilieux_LEGALASPECTSOFCOMPUTING ,Plant Science ,Xanthomonas campestris ,01 natural sciences ,Mass Spectrometry ,Epitopes ,Plant Microbiology ,Protein structure ,Solanum lycopersicum ,santé des plantes ,Gram Negative ,lcsh:Science ,Promoter Regions, Genetic ,Peptide sequence ,bactérie ,0303 health sciences ,Multidisciplinary ,Vegetal Biology ,biology ,Effector ,Bacterial Pathogens ,3. Good health ,Complementation ,DNA-Binding Proteins ,Biochemistry ,Pathovar ,Dimerization ,Research Article ,agent pathogène ,Molecular Sequence Data ,Plant Pathogens ,xanthomonas ,Microbiology ,DNA-binding protein ,03 medical and health sciences ,Xanthomonas ,Tobacco ,Escherichia coli ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,Amino Acid Sequence ,Biology ,Microbial Pathogens ,030304 developmental biology ,bactérie phytopathogène ,Sequence Homology, Amino Acid ,Bacteria ,lcsh:R ,Genetic Complementation Test ,Organisms ,Biology and Life Sciences ,DNA ,Plant Pathology ,biology.organism_classification ,Protein Structure, Tertiary ,Retraction ,Microscopy, Fluorescence ,lcsh:Q ,Biologie végétale ,010606 plant biology & botany - Abstract
This is an open-access article distributed under the terms of the Creative Commons Attribution License.-- et al., During evolution, pathogens have developed a variety of strategies to suppress plant-triggered mmunity and promote successful infection. In Gram-negative phytopathogenic bacteria, the so- alled type III protein secretion system works as a molecular syringe to inject type III effectors (T3Es) into plant cells. The XopD T3E from the strain 85-10 of Xanthomonas campestris pathovar vesicatoria (Xcv) delays the onset of symptom development and alters basal defence responses to promote pathogen growth in infected tomato leaves. XopD was previously described as a modular protein that contains (i) an N-terminal DNA-binding domain (DBD), (II) two tandemly repeated EAR (ERF-associated amphiphillic repression) motifs involved in transcriptional repression, and (iii) a C-terminal cysteine protease domain, involved in release of SUMO (small ubiquitin-like modifier) from SUMO-modified proteins. Here, we show that the XopD protein hat is produced and secreted by Xcv presents an additional N-terminal extension of 215 amino acids. Closer analysis of this newly identified N-terminal domain shows a low complexity region rich in lysine, alanine and glutamic acid residues (KAE-rich) with high propensity to form coiled-coil structures that confers to XopD the ability to form dimers when expressed in E. coli. The full length XopD protein identified in this study (XopD1-760) displays stronger repression of the opD plant target promoter PR1, as compared to the XopD version annotated in the public databases (XopD216-760). Furthermore, the N-terminal extension of XopD, which is absent in XopD216-760, is essential for XopD type III-dependent secretion and, therefore, for complementation of an Xcv mutant strain deleted from XopD in its ability to delay symptom development in tomato susceptible cultivars. The identification of the complete sequence of XopD opens new erspectives for future studies on the XopD protein and its virulence-associated functions in planta. © 2010 Canonne et al., J.C. was funded by a grant from the French Ministry of National Education and Research. Mass Spectrometry work was supported by grants from the Fondation pour la Recherche Médicale (FRM; ‘Grands Equipements’), the Toulouse Midi-Pyrénées Génopole, the Midi-Pyrénées Regional Council (grant CR07003760) and the GIS-IBISA (Infrastructure en Biologie Santé et Agronomie). This work was supported by a French ANR-Jeunes Chercheurs grant (ANR JC08_324792) to S.R.
- Published
- 2010
8. Autoacetylation of the Ralstonia solanacearum effector PopP2 targets a lysine residue essential for RRS1-R-mediated immunity in Arabidopsis.
- Author
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Tasset C, Bernoux M, Jauneau A, Pouzet C, Brière C, Kieffer-Jacquinod S, Rivas S, Marco Y, and Deslandes L
- Subjects
- Acetylation, Amino Acid Sequence, Arabidopsis genetics, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins immunology, Bacterial Proteins genetics, Bacterial Proteins immunology, Blotting, Western, Cell Nucleus immunology, Cell Nucleus metabolism, Cysteine Endopeptidases genetics, Cysteine Endopeptidases immunology, Cysteine Endopeptidases metabolism, Fluorescence, Gene Expression Regulation, Plant, Lysine genetics, Lysine immunology, Molecular Sequence Data, Mutation genetics, Plant Diseases genetics, Plant Diseases microbiology, RNA, Messenger genetics, Ralstonia solanacearum genetics, Ralstonia solanacearum pathogenicity, Reverse Transcriptase Polymerase Chain Reaction, Sequence Homology, Amino Acid, Arabidopsis microbiology, Arabidopsis Proteins metabolism, Bacterial Proteins metabolism, Immunity, Innate immunology, Lysine metabolism, Plant Diseases immunology, Plant Immunity, Ralstonia solanacearum metabolism
- Abstract
Type III effector proteins from bacterial pathogens manipulate components of host immunity to suppress defence responses and promote pathogen development. In plants, host proteins targeted by some effectors called avirulence proteins are surveyed by plant disease resistance proteins referred to as "guards". The Ralstonia solanacearum effector protein PopP2 triggers immunity in Arabidopsis following its perception by the RRS1-R resistance protein. Here, we show that PopP2 interacts with RRS1-R in the nucleus of living plant cells. PopP2 belongs to the YopJ-like family of cysteine proteases, which share a conserved catalytic triad that includes a highly conserved cysteine residue. The catalytic cysteine mutant PopP2-C321A is impaired in its avirulence activity although it is still able to interact with RRS1-R. In addition, PopP2 prevents proteasomal degradation of RRS1-R, independent of the presence of an integral PopP2 catalytic core. A liquid chromatography/tandem mass spectrometry analysis showed that PopP2 displays acetyl-transferase activity leading to its autoacetylation on a particular lysine residue, which is well conserved among all members of the YopJ family. These data suggest that this lysine residue may correspond to a key binding site for acetyl-coenzyme A required for protein activity. Indeed, mutation of this lysine in PopP2 abolishes RRS1-R-mediated immunity. In agreement with the guard hypothesis, our results favour the idea that activation of the plant immune response by RRS1-R depends not only on the physical interaction between the two proteins but also on its perception of PopP2 enzymatic activity.
- Published
- 2010
- Full Text
- View/download PDF
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