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Microbial transport in fractured carbonate rock using enhanced solutions is a significant and neglected research topic in the literature. We propose an extended colloid filtration theory (CFT) combined with a particle-tracking following streamlines (PTFS) model for the rapid prediction of breakthrough curves (BTCs) and plumes of pathogens in three-dimensional (3-D) discrete fracture networks (DFNs). We adapted CFT in porous media to pathogen transport in fractures containing Terra Rossa (soil) deposits. As an example of the model capability, a simulation was used to predict the 3-D motion field and Escherichia coli count in groundwater originating from the Forcatella managed aquifer recharge (MAR) Facility (Brindisi, Italy) using a DFN composed of 3,900 fractures. In arid regions, MAR facilities are significant for sustaining basic human needs, such as freshwater supply for drinking and crop production. The Markov chain Monte Carlo (MCMC) technique was applied to E. coli counts in the collected water samples to increase data representativeness. The pathogen transport coefficients were further supported by batch filtration tests carried out in the CNR/IRSA Laboratory (Bari, Italy). The mean E. coli attachment rate coefficient of 0.15 × 10 -8  m 2  d -1 (sticking efficiency = 1.1 × 10 -8  m) resulted in a 2.1 log 10 removal in 600 m of reclaimed water filtration. The simulation output visualized the E. coli 3-D pathways in groundwater and the positions of contaminated groundwater spring outflows on Forcatella Beach. The simulation results agreed with the mean MCMC output of E. coli concentrations in bathing water under unperturbed geochemical and environmental flow and transport conditions. However, results indicate that concentrations of pathogenic strains, parasites, and enteric viruses may enter the marine environment of MAR sites during flood periods., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Author(s). Published by Elsevier Ltd.. All rights reserved.)

Effluents derived from a municipal wastewater treatment plant were used for virus filtration/retention experiments by using a horizontal laboratory filter. Filtration tests were performed to examine how soil geochemical heterogeneity and fracture patterns affected the transport of viruses in groundwater in order to model the influence of reductive perturbations in ionic strength (IS) during wastewater filtration. Although perturbations of IS and velocity are known to result in resuspension of colloids, we found that the effect of soil geochemical heterogeneity can produce strong and instantaneous virus releases in fractured aquifers, likely an internal additional source of viruses. Sixteen limestone slabs were packed in a PVC box filter at the Bari Laboratory (South Italy) to replicate wastewater filtration throughout a fractured medium similar to the Bari carbonate aquifer. Terra rossa, which is an aggregate of sand, silt and clay, was unevenly spread on the surface of each limestone slab within the filter. Since the mineralogical composition of terra rossa includes iron (hematite, magnetite, and goethite) oxides, the soil exhibited localized unfavorable colloid/collector interactions for attachment. In contrast, soil-free parts of the fracture surfaces maintained favorable colloid/collector interactions. We found in our experiments that the lowering of IS due to the reduction of water salt content, which could occur during runoff injections after rainfall, might be sufficient to cause strong detachment of viruses from fracture surfaces, allowing further migration into the groundwater. The model in this work can predict the count and pathways of released viruses in groundwater fractures under soil geochemical heterogeneity and originated by reductions of IS, by using analytical solutions., (Copyright © 2017 Elsevier Ltd. All rights reserved.)