1. Seasonal dynamics in leaf litter decomposing microbial communities in temperate forests: a whole-genome- sequencing-based study.
- Author
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Khomutovska N, Jasser I, Sarapultseva P, Spirina V, Zaitsev A, Masłowiecka J, and Isidorov VA
- Subjects
- Bacteria genetics, Bacteria classification, Bacteria metabolism, Fungi genetics, Fungi classification, Fungi metabolism, Fungi isolation & purification, Whole Genome Sequencing, Metagenome genetics, Trees microbiology, Plant Leaves microbiology, Plant Leaves metabolism, Forests, Seasons, Microbiota genetics, Microbiota physiology
- Abstract
Leaf litter decomposition, a crucial component of the global carbon cycle, relies on the pivotal role played by microorganisms. However, despite their ecological importance, leaf-litter-decomposing microorganism taxonomic and functional diversity needs additional study. This study explores the taxonomic composition, dynamics, and functional role of microbial communities that decompose leaf litter of forest-forming tree species in two ecologically unique regions of Europe. Twenty-nine microbial metagenomes isolated from the leaf litter of eight forest-forming species of woody plants were investigated by Illumina technology using read- and assembly-based approaches of sequences analysis. The taxonomic structure of the microbial community varies depending on the stage of litter decomposition; however, the community's core is formed by Pseudomonas , Sphingomonas , Stenotrophomonas , and Pedobacter genera of Bacteria and by Aureobasidium , Penicillium , Venturia genera of Fungi. A comparative analysis of the taxonomic structure and composition of the microbial communities revealed that in both regions, seasonal changes in structure take place; however, there is no clear pattern in its dynamics. Functional gene analysis of MAGs revealed numerous metabolic profiles associated with leaf litter degradation. This highlights the diverse metabolic capabilities of microbial communities and their implications for ecosystem processes, including the production of volatile organic compounds (VOCs) during organic matter decomposition. This study provides important advances in understanding of ecosystem processes and the carbon cycle, underscoring the need to unravel the intricacies of microbial communities within these contexts., Competing Interests: The authors declare there are no competing interests., (©2024 Khomutovska et al.)
- Published
- 2024
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