1. Experimental glioma with high bHLH expression harbor increased replicative stress and are sensitive toward ATR inhibition
- Author
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Manfred Neumann, Peter Heutink, Michael Stefan Hoetker, Parameswari Govindarajan, Felix Lennartz, Sarah Beyeler, Bianca Walter, Srinath Rajaraman, Marcos Tatagiba, Justyna Przystal, Patrizia Rizzu, Ghazaleh Tabatabai, Olivier Raineteau, Stefan Zwirner, Sven Nahnsen, Stefan Czemmel, Marilin Koch, Lars Zender, and Denis Canjuga
- Subjects
0301 basic medicine ,DDR ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,In vivo ,Glioma ,Gene expression ,medicine ,AcademicSubjects/MED00300 ,ddc:610 ,RNA-Seq ,Transcription factor ,bHLH transcription factors ,Temozolomide ,Chemistry ,medicine.disease ,030104 developmental biology ,CAGE ,030220 oncology & carcinogenesis ,Basic and Translational Investigations ,Ataxia-telangiectasia ,Cancer research ,AcademicSubjects/MED00310 ,E47 ,Ataxia telangiectasia and Rad3 related ,medicine.drug - Abstract
Background The overexpression of (basic)helix-loop-helix ((b)HLH) transcription factors (TFs) is frequent in malignant glioma. We investigated molecular effects upon disruption of the (b)HLH network by a dominant-negative variant of the E47 protein (dnE47). Our goal was to identify novel molecular subgroup-specific therapeutic strategies. Methods Glioma cell lines LN229, LNZ308, and GS-2/GS-9 were lentivirally transduced. Functional characterization included immunocytochemistry, immunoblots, cytotoxic, and clonogenic survival assays in vitro, and latency until neurological symptoms in vivo. Results of cap analysis gene expression and RNA-sequencing were further validated by immunoblot, flow cytometry, and functional assays in vitro. Results The induction of dnE47-RFP led to cytoplasmic sequestration of (b)HLH TFs and antiglioma activity in vitro and in vivo. Downstream molecular events, ie, alterations in transcription start site usage and in the transcriptome revealed enrichment of cancer-relevant pathways, particularly of the DNA damage response (DDR) pathway. Pharmacologic validation of this result using ataxia telangiectasia and Rad3 related (ATR) inhibition led to a significantly enhanced early and late apoptotic effect compared with temozolomide alone. Conclusions Gliomas overexpressing (b)HLH TFs are sensitive toward inhibition of the ATR kinase. The combination of ATR inhibition plus temozolomide or radiation therapy in this molecular subgroup are warranted.
- Published
- 2020