1. Heterogeneity of immune cells in human atherosclerosis revealed by scRNA-Seq
- Author
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Alma Zernecke, Clément Cochain, Jenifer Vallejo, and Klaus Ley
- Subjects
Cell type ,Physiology ,Cell ,Biology ,Peripheral blood mononuclear cell ,Immunophenotyping ,Transcriptome ,Genetic Heterogeneity ,Mice ,Immune system ,Physiology (medical) ,Leukocytes ,medicine ,Animals ,Humans ,Myeloid Cells ,RNA-Seq ,Gene Expression Profiling ,Atherosclerosis ,Natural killer T cell ,Phenotype ,Plaque, Atherosclerotic ,Invited Spotlight Reviews ,medicine.anatomical_structure ,Immune System ,Immunology ,biology.protein ,Single-Cell Analysis ,Antibody ,Cardiology and Cardiovascular Medicine - Abstract
Immune cells in atherosclerosis include T, B, natural killer (NK) and NKT cells, macrophages, monocytes, dendritic cells (DCs), neutrophils, and mast cells. Advances in single-cell RNA sequencing (sRNA-Seq) have refined our understanding of immune cell subsets. Four recent studies have used scRNA-Seq of immune cells in human atherosclerotic lesions and peripheral blood mononuclear cells (PBMCs), some including cell surface phenotypes revealed by oligonucleotide-tagged antibodies, which confirmed known and identified new immune cell subsets and identified genes significantly up-regulated in PBMCs from HIV+ subjects with atherosclerosis compared to PBMCs from matched HIV+ subjects without atherosclerosis. The ability of scRNA-Seq to identify cell types is greatly augmented by adding cell surface phenotype using antibody sequencing. In this review, we summarize the latest data obtained by scRNA-Seq on plaques and human PBMCs in human subjects with atherosclerosis.
- Published
- 2021