35 results on '"Qian, T."'
Search Results
2. T regulatory cells and B cells cooperate to form a regulatory loop that maintains gut homeostasis and suppresses dextran sulfate sodium-induced colitis
- Author
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Avijit Ray, Liu X, Ji-Yang Wang, Chu Y, Wang L, Sreemanti Basu, Rui He, Qian T, Bonnie N. Dittel, and Jiang X
- Subjects
Adoptive cell transfer ,Immunology ,Enzyme-Linked Immunosorbent Assay ,Mice, SCID ,Biology ,Polymerase Chain Reaction ,T-Lymphocytes, Regulatory ,Article ,Flow cytometry ,Mice ,Peyer's Patches ,Immune system ,Intestinal mucosa ,medicine ,Immunology and Allergy ,Animals ,Homeostasis ,Colitis ,Intestinal Mucosa ,Dextran Sulfate Sodium ,B-Lymphocytes ,medicine.diagnostic_test ,Dextran Sulfate ,medicine.disease ,Flow Cytometry ,Adoptive Transfer ,3. Good health ,Cell biology ,Mice, Inbred C57BL ,Disease Models, Animal ,biology.protein ,Antibody - Abstract
Regulatory T cells (Tregs) and B cells present in gut-associated lymphoid tissues (GALT) are both implicated in the resolution of colitis. However, how the functions of these cells are coordinated remains elusive. We used the dextran sulfate sodium (DSS)-induced colitis model combined with gene-modified mice to monitor the progression of colitis, and simultaneously examine the number of Tregs and B cells, and the production of IgA antibodies. We found that DSS-treated mice exhibited more severe colitis in the absence of B cells, and that the adoptive transfer of B cells attenuated the disease. Moreover, the transfer of IL-10(-/-) B cells also attenuated colitis, suggesting that B cells inhibited colitis through an interleukin-10 (IL-10)-independent pathway. Furthermore, antibody depletion of Tregs resulted in exacerbated colitis. Intriguingly, the number of GALT Tregs in B cell-deficient mice was significantly decreased during colitis and the adoptive transfer of B cells into these mice restored the Treg numbers, indicating that B cells contribute to Treg homeostasis. We also found that B cells induced the proliferation of Tregs that in turn promoted B-cell differentiation into IgA-producing plasma cells. These results demonstrate that B cells and Tregs interact and cooperate to prevent excessive immune responses that can lead to colitis.
- Published
- 2015
3. Semantic-enhanced graph neural network for named entity recognition in ancient Chinese books.
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Xu Y, Mao C, Wang Z, Jin G, Zhong L, and Qian T
- Subjects
- China, Books history, Humans, Deep Learning, Semantics, Neural Networks, Computer
- Abstract
Named entity recognition (NER) plays a crucial role in the extraction and utilization of knowledge of ancient Chinese books. However, the challenges of ancient Chinese NER not only originate from linguistic features such as the use of single characters and short sentences but are also exacerbated by the scarcity of training data. These factors together limit the capability of deep learning models, like BERT-CRF, in capturing the semantic representation of ancient Chinese characters. In this paper, we explore the semantic enhancement of NER in ancient Chinese books through the utilization of external knowledge. We propose a novel model based on Graph Neural Networks that integrates two different forms of external knowledge: dictionary-level and chapter-level information. Through the Graph Attention Mechanism (GAT), these external knowledge are effectively incorporated into the model's input context. Our model is evaluated on the C_CLUE dataset, showing an improvement of 3.82% over the baseline BAC-CRF model. It also achieves the best score compared to several state-of-the-art dictionary-augmented models., (© 2024. The Author(s).)
- Published
- 2024
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4. Activation of Einstein-Podolsky-Rosen steering sharing with unsharp nonlocal measurements.
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Han XH, Qian T, Dong SC, Wang S, Xiao Y, and Gu YJ
- Abstract
Einstein-Podolsky-Rosen (EPR) steering is commonly shared among multiple observers by utilizing unsharp measurements. Nevertheless, their usage is restricted to local measurements and does not encompass all nonlocal measurement-based cases. In this work, a method for finding beneficial local measurement settings has been expanded to include nonlocal measurement cases. This method is applicable for any bipartite state and offers benefits even in scenarios with a high number of measurement settings. Using the Greenberger-Horne-Zeilinger state as an illustration, we show that employing unsharp nonlocal measurements can activate the phenomenon of steering sharing in contrast to using local measurements. Furthermore, our findings demonstrate that nonlocal measurements with unequal strength possess a greater activation capability compared to those with equal strength. Our activation method generates fresh concepts for conservation and recycling quantum resources., (© 2024. The Author(s).)
- Published
- 2024
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5. Dual quantum spin Hall insulator by density-tuned correlations in TaIrTe 4 .
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Tang J, Ding TS, Chen H, Gao A, Qian T, Huang Z, Sun Z, Han X, Strasser A, Li J, Geiwitz M, Shehabeldin M, Belosevich V, Wang Z, Wang Y, Watanabe K, Taniguchi T, Bell DC, Wang Z, Fu L, Zhang Y, Qian X, Burch KS, Shi Y, Ni N, Chang G, Xu SY, and Ma Q
- Abstract
The convergence of topology and correlations represents a highly coveted realm in the pursuit of new quantum states of matter
1 . Introducing electron correlations to a quantum spin Hall (QSH) insulator can lead to the emergence of a fractional topological insulator and other exotic time-reversal-symmetric topological order2-8 , not possible in quantum Hall and Chern insulator systems. Here we report a new dual QSH insulator within the intrinsic monolayer crystal of TaIrTe4 , arising from the interplay of its single-particle topology and density-tuned electron correlations. At charge neutrality, monolayer TaIrTe4 demonstrates the QSH insulator, manifesting enhanced nonlocal transport and quantized helical edge conductance. After introducing electrons from charge neutrality, TaIrTe4 shows metallic behaviour in only a small range of charge densities but quickly goes into a new insulating state, entirely unexpected on the basis of the single-particle band structure of TaIrTe4 . This insulating state could arise from a strong electronic instability near the van Hove singularities, probably leading to a charge density wave (CDW). Remarkably, within this correlated insulating gap, we observe a resurgence of the QSH state. The observation of helical edge conduction in a CDW gap could bridge spin physics and charge orders. The discovery of a dual QSH insulator introduces a new method for creating topological flat minibands through CDW superlattices, which offer a promising platform for exploring time-reversal-symmetric fractional phases and electromagnetism2-4,9,10 ., (© 2024. The Author(s), under exclusive licence to Springer Nature Limited.)- Published
- 2024
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6. Methamphetamine use increases the risk of cerebral small vessel disease in young patients with acute ischemic stroke.
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Zhu Z, Vanderschelden B, Lee SJ, Blackwill H, Shafie M, Soun JE, Chow D, Chang P, Stradling D, Qian T, and Yu W
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- Humans, Male, Magnetic Resonance Imaging, Ischemic Stroke complications, Methamphetamine adverse effects, Cerebral Small Vessel Diseases complications, Cerebral Small Vessel Diseases diagnostic imaging, Stroke etiology, Stroke complications, Hypertension complications
- Abstract
Methamphetamine use causes spikes in blood pressure. Chronic hypertension is a major risk factor for cerebral small vessel disease (cSVD). The aim of this study is to investigate whether methamphetamine use increases the risk of cSVD. Consecutive patients with acute ischemic stroke at our medical center were screened for methamphetamine use and evidence of cSVD on MRI of the brain. Methamphetamine use was identified by self-reported history and/or positive urine drug screen. Propensity score matching was used to select non-methamphetamine controls. Sensitivity analysis was performed to assess the effect of methamphetamine use on cSVD. Among 1369 eligible patients, 61 (4.5%) were identified to have a history of methamphetamine use and/or positive urine drug screen. Compared with the non-methamphetamine group (n = 1306), the patients with methamphetamine abuse were significantly younger (54.5 ± 9.7 vs. 70.5 ± 12.4, p < 0.001), male (78.7% vs. 54.0%, p < 0.001) and White (78.7% vs. 50.4%, p < 0.001). Sensitivity analysis showed that methamphetamine use was associated with increased white matter hyperintensities, lacunes, and total burden of cSVD. The association was independent of age, sex, concomitant cocaine use, hyperlipidemia, acute hypertension, and stroke severity. Our findings suggest that methamphetamine use increases the risk of cSVD in young patients with acute ischemic stroke., (© 2023. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2023
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7. Protecting nonlocal quantum correlations in correlated squeezed generalized amplitude damping channel.
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Wang S, Han XH, Li WC, Qian T, Fan X, Xiao Y, and Gu YJ
- Abstract
Nonlocal quantum correlations, such as quantum entanglement, quantum steering, and Bell nonlocality, are crucial resources for quantum information tasks. How to protect these quantum resources from decoherence is one of the most urgent problems to be solved. Here, we investigate the evolution of these correlations in the correlated squeezed generalized amplitude damping (SGAD) channel and propose a scheme to protect them with weak measurement (WM) and quantum measurement reversal (QMR). Compared with the results of the uncorrelated SGAD channel, we find that when [Formula: see text], correlation and squeezing effects can prolong the survival time of quantum entanglement, Bell nonlocality, and quantum steering by about 152 times, 207 times, and 10 times, respectively. In addition, local WM and QMR can effectively recover the disappeared nonlocal quantum correlations either in uncorrelated or completely correlated SGAD channels. Moreover, we find that these initial nonlocal quantum correlations could be drastically amplified under the correlated channel. And the steering direction can be flexibly manipulated either by changing the channel parameters or the strength of WM and QMR. These results not only make a step forward in suppressing decoherence and enhancing quantum correlation in noise channels, but also help to develop relevant practical applications., (© 2022. The Author(s).)
- Published
- 2022
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8. The landscape of extrachromosomal circular DNA (eccDNA) in the normal hematopoiesis and leukemia evolution.
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Zeng T, Huang W, Cui L, Zhu P, Lin Q, Zhang W, Li J, Deng C, Wu Z, Huang Z, Zhang Z, Qian T, Xie W, Xiao M, Chen Y, and Fu L
- Abstract
Elevated extrachromosomal circular DNA (eccDNA) has been reported to accelerate tumor pathogenesis. Although the eccDNA profiles of other tumors have been established, the landscape of the eccDNA of acute myeloid leukemia (AML) has not been revealed. Our study first depicted the eccDNA profile of normal hematopoiesis and AML evolution by exploiting the ATAC-seq and RNA-seq data from nine healthy donors and 12 AML patients, which contained a total of 137 cell samples and 96 RNA-seq samples (including 16 blood cell types of the normal hematopoietic and AML hierarchies). We found the number of eccDNAs generally increased with the evolution of normal hematopoiesis and AML. The ecDNAs and ring chromosomes were found to reappear both in normal hematopoiesis and AML cells. Furthermore, we compared the eccDNAs of AML with normal cells. There were almost 300 AML-specific genes, including the known oncogenes NRAS, MCL1, EVI1, GATA2, WT1, and PAK1. And the ecDNA (chr11: 58668376-58826008) occurred in five out of 17 AML evolution-related cells, which was associated with the high expression of the GLYATL1 gene and the high expressed GLYATL1 was a poor prognostic factor. In conclusion, the eccDNA profiles of normal hematopoiesis and AML evolution were depicted and the recurrent eccDNAs we revealed might be utilized in the treatment of AML as biomarkers., (© 2022. The Author(s).)
- Published
- 2022
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9. Adjustment for body mass index changes inverse associations of HDL-cholesterol with blood pressure and hypertension to positive associations.
- Author
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Yang G, Qian T, Sun H, Xu Q, Hou X, Hu W, Zhang G, Drummond GR, Sobey CG, Witting PK, Denton KM, Charchar FJ, Golledge J, and Wang Y
- Subjects
- Adult, Blood Pressure, Body Mass Index, Cholesterol, HDL, Cross-Sectional Studies, Female, Humans, Male, Middle Aged, Risk Factors, Triglycerides, Blood Glucose, Hypertension diagnosis, Hypertension epidemiology
- Abstract
The associations between high-density lipoprotein cholesterol (HDL-C) and blood pressure (BP) or hypertension are inconsistent in previous studies. This study aimed to assess these associations in a large cohort of Chinese adults and across different age groups. This cross-sectional association study included 22,081 Chinese adults. Associations of HDL-C with BP and hypertension were analyzed using linear or logistic regression, with or without adjustment for confounding factors. HDL-C was inversely associated with BP and hypertension. These associations were still apparent after adjustment for age, sex, fasting plasma glucose, and low-density lipoprotein cholesterol. Sub-analyses revealed: (1) in the whole cohort and females alone, HDL-C was inversely associated with BP and hypertension in young and middle-aged but not older participants; (2) in males alone, HDL-C was not associated with systolic BP or hypertension. However, HDL-C was either inversely, or not, or positively associated with BP in young, middle-aged, and older males, respectively. After further adjustment for body mass index (BMI), the negative associations of HDL-C with BP and hypertension in the whole cohort became positive ones, and the positive associations only presented in males. These findings suggest that further adjustment for BMI changes inverse associations of HDL-cholesterol with BP and hypertension to positive associations in a cohort of Chinese adults., (© 2021. The Author(s), under exclusive licence to Springer Nature Limited.)
- Published
- 2022
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10. Hyperuricemia is independently associated with hypertension in men under 60 years in a general Chinese population.
- Author
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Qian T, Sun H, Xu Q, Hou X, Hu W, Zhang G, Drummond GR, Sobey CG, Charchar FJ, Golledge J, Wang Y, and Yang G
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- Adolescent, Adult, Aged, Aged, 80 and over, China epidemiology, Cross-Sectional Studies, Female, Humans, Male, Middle Aged, Retrospective Studies, Risk Factors, Uric Acid, Young Adult, Hypertension diagnosis, Hypertension epidemiology, Hyperuricemia diagnosis, Hyperuricemia epidemiology
- Abstract
Hyperuricemia has been associated with hypertension, however, whether this association exists across all decades of adult life is unknown. This study aimed to assess the association between hyperuricemia and hypertension in relation to age. This retrospective cross-sectional study included a total of 22,556 adult Chinese people who attended Health Physical Examination in a Chinese hospital. Participants were aged between 18 and 95 years (mean [standard deviation], 45.4 [14.0]). Serum uric acid levels and blood pressure were measured. Associations between serum uric acid and blood pressure, and between hyperuricemia and hypertension diagnosis were analyzed using linear or logistic regression, adjusting for confounding risk factors including age, sex, total cholesterol, high-density lipoprotein cholesterol, and fasting blood glucose. Sub-analysis was stratified by age and sex. Before adjustment, high serum uric acid was associated with higher systolic blood pressure (β = 0.214, P < 0.001) and higher diastolic blood pressure (β = 0.271, P < 0.001). Hyperuricemia was associated with hypertension diagnosis (OR, 1.763; 95% CI, 1.635-1.901; P < 0.001) in an unadjusted analysis. These findings remained significant after adjusting for confounding factors. Sub-analysis suggested that the association between uric acid and blood pressure was weaker in older age groups and the association between hyperuricemia and hypertension was limited to people under 60 years. Hyperuricemia was independently associated with hypertension diagnosis in men but not in women, and the independent association between hyperuricemia and hypertension only presented in men under 60 years. This study suggests that hyperuricemia is independently associated with hypertension in Chinese men under 60 years., (© 2020. The Author(s), under exclusive licence to Springer Nature Limited part of Springer Nature.)
- Published
- 2021
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11. A genetically encoded sensor for measuring serotonin dynamics.
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Wan J, Peng W, Li X, Qian T, Song K, Zeng J, Deng F, Hao S, Feng J, Zhang P, Zhang Y, Zou J, Pan S, Shin M, Venton BJ, Zhu JJ, Jing M, Xu M, and Li Y
- Subjects
- Animals, Female, HEK293 Cells, Humans, Male, Mice, Rats, Signal Transduction physiology, Neurons metabolism, Receptors, G-Protein-Coupled metabolism, Serotonergic Neurons metabolism, Serotonin metabolism
- Abstract
Serotonin (5-HT) is a phylogenetically conserved monoamine neurotransmitter modulating important processes in the brain. To directly visualize the release of 5-HT, we developed a genetically encoded G-protein-coupled receptor (GPCR)-activation-based 5-HT (GRAB
5-HT ) sensor with high sensitivity, high selectivity, subsecond kinetics and subcellular resolution. GRAB5-HT detects 5-HT release in multiple physiological and pathological conditions in both flies and mice and provides new insights into the dynamics and mechanisms of 5-HT signaling.- Published
- 2021
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12. Reduced renal function may explain the higher prevalence of hyperuricemia in older people.
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Wang Y, Zhang W, Qian T, Sun H, Xu Q, Hou X, Hu W, Zhang G, Drummond GR, Sobey CG, Charchar FJ, Golledge J, and Yang G
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- Adult, Age Factors, Aged, Aged, 80 and over, Female, Humans, Male, Middle Aged, Prevalence, Retrospective Studies, Risk Factors, Aging blood, Glomerular Filtration Rate, Hyperuricemia blood, Hyperuricemia epidemiology, Hyperuricemia physiopathology, Kidney metabolism, Kidney physiopathology
- Abstract
This study aimed to investigate the contribution of renal dysfunction to enhanced hyperuricemia prevalence in older people. A cohort of 13,288 Chinese people aged between 40 and 95 years were recruited from January to May 2019. Serum uric acid concentration and estimated glomerular filtration rate [eGFR] were measured. The associations between age or eGFR and serum uric acid or hyperuricemia were analyzed using linear or binary logistic regression adjusting for risk factors. Uric acid concentration and prevalence of hyperuricemia were greater in older participants. Adjustment for reduced renal function (eGFR < 60 mL/min/1.73 m
2 ) eliminated the associations between older age and higher uric acid concentration and between older age and higher prevalence of hyperuricemia diagnosis, whereas adjustment for other risk factors did not change those associations. Lower eGFR was associated with higher uric acid concentration both before (β = - 0.296, P < 0.001) and after adjustment for age (β = - 0.313, P < 0.001). Reduced renal function was associated with hyperuricemia diagnosis both before (odds ratio, OR, 3.64; 95% CI 3.10-4.28; P < 0.001) and after adjustment for age (adjusted OR, 3.82; 95% CI 3.22-4.54; P < 0.001). Mean serum uric acid and prevalence of hyperuricemia were higher in people with eGFR < 60 mL/min/1.73 m2 than those with eGFR ≥ 60 mL/min/1.73 m2 . The prevalence of reduced renal function increased with older age (P < 0.001). This study suggests that reduced renal function can explain the increased uric acid levels and hyperuricemia diagnoses in older people.- Published
- 2021
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13. Prognostic role of minichromosome maintenance family in multiple myeloma.
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Quan L, Qian T, Cui L, Liu Y, Fu L, and Si C
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- Adult, Aged, Disease-Free Survival, Female, Humans, Middle Aged, Multiple Myeloma mortality, Prognosis, Biomarkers, Tumor metabolism, Multiple Myeloma genetics
- Abstract
Multiple myeloma (MM) is a plasma cell malignancy. The minichromosome maintenance (MCM) family involve in DNA replication and is vital in limiting replication in cell cycle. The prognostic role of MCMs in MM is still unclear. We took four independent GEO datasets to analyze the relationship between the expression of MCMs and myeloma progression and survival. The expression of MCMs showed an upward trend with myeloma progression in 205 patients. High MCM2/3/4/6/8 expression was associated with both poor EFS and OS (all p < 0.050). Multivariate analysis demonstrated that high MCM2 expression, B2M, and LDH were independent risk factors. Moreover, the combination of MCM2/B2M and MCM2/LDH was a better tool in prognostication. In conclusion, high MCM2 expression is an independent adverse prognostic factor and could be used as a prognostic biomarker in MM.
- Published
- 2020
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14. Multicenter dataset of multi-shell diffusion MRI in healthy traveling adults with identical settings.
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Tong Q, He H, Gong T, Li C, Liang P, Qian T, Sun Y, Ding Q, Li K, and Zhong J
- Subjects
- Adult, Humans, Brain Mapping, Diffusion Magnetic Resonance Imaging
- Abstract
Multicenter diffusion magnetic resonance imaging (MRI) has drawn great attention recently due to the expanding need for large-scale brain imaging studies, whereas the variability in MRI scanners and data acquisition tends to confound reliable individual-based analysis of diffusion measures. In addition, a growing number of multi-shell diffusion models have been shown with the potential to generate various estimates of physio-pathological information, yet their reliability and reproducibility in multicenter studies remain to be assessed. In this article, we describe a multi-shell diffusion dataset collected from three traveling subjects with identical acquisition settings in ten imaging centers. Both the scanner type and imaging protocol for anatomical and diffusion imaging were well controlled. This dataset is expected to replenish individual reproducible studies via multicenter collaboration by providing an open resource for advanced and novel microstructural and tractography modelling and quantification.
- Published
- 2020
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15. PINCH-1 interacts with myoferlin to promote breast cancer progression and metastasis.
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Qian T, Liu C, Ding Y, Guo C, Cai R, Wang X, Wang R, Zhang K, Zhou L, Deng Y, Wu C, and Sun Y
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- Adaptor Proteins, Signal Transducing genetics, Animals, Breast Neoplasms genetics, Breast Neoplasms pathology, Breast Neoplasms physiopathology, Calcium-Binding Proteins genetics, Cell Line, Tumor, Cell Movement, Cell Proliferation, Disease Progression, Female, Gene Expression Regulation, Neoplastic, Humans, LIM Domain Proteins genetics, Membrane Proteins genetics, Mice, Mice, Inbred C57BL, Muscle Proteins genetics, Signal Transduction, Adaptor Proteins, Signal Transducing metabolism, Breast Neoplasms metabolism, Calcium-Binding Proteins metabolism, LIM Domain Proteins metabolism, Membrane Proteins metabolism, Muscle Proteins metabolism, Neoplasm Metastasis
- Abstract
PINCH-1 is a cytoplasmic component of the cell-extracellular matrix (ECM) adhesion machine that is frequently overexpressed in cancer. The functions and mechanism of PINCH-1 in cancer, however, remain to be determined. Here, we show that PINCH-1 interacts with myoferlin, a transmembrane protein that is critical for cancer progression. High expression of both PINCH-1 and myoferlin correlates with poor clinical outcome in human breast cancer patients. Ablation of PINCH-1 from breast cancer cells diminished myoferlin level and suppressed breast cancer cell proliferation, migration, and endothelial cell tube formation in vitro and breast tumor growth, angiogenesis and metastasis in vivo. Mechanistically, PINCH-1 controls myoferlin level through its interaction with myoferlin and regulation of its ubiquitination and proteasome-dependent degradation. Functionally, re-expression of PINCH-1, but not that of a myoferlin-binding defectiveΔLIM2 mutant, effectively reversed the inhibition of myoferlin expression and breast cancer progression induced by loss of PINCH-1. Finally, restoration of myoferlin expression was sufficient to reverse PINCH-1-deficiency induced inhibition on breast cancer progression. These results reveal a PINCH-1-myoferlin signaling axis that is critical for breast cancer progression and suggest a new strategy for therapeutic control of breast cancer.
- Published
- 2020
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16. Restricted immunological and cellular pathways are shared by murine models of chronic alcohol consumption.
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Vogle A, Qian T, Zhu S, Burnett E, Fey H, Zhu Z, Keshavarzian A, Shaikh M, Hoshida Y, Kim M, and Aloman C
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- Alcohol Drinking genetics, Alcohol Drinking immunology, Alcoholism etiology, Alcoholism genetics, Alcoholism immunology, Animals, Chronic Disease, Disease Models, Animal, Female, Humans, Liver immunology, Liver metabolism, Liver Diseases, Alcoholic etiology, Liver Diseases, Alcoholic genetics, Liver Diseases, Alcoholic immunology, Mice, Mice, Inbred C57BL, Transcriptome, Alcohol Drinking pathology, Alcoholism pathology, Liver pathology, Liver Diseases, Alcoholic pathology
- Abstract
Murine models of chronic alcohol consumption are frequently used to investigate alcoholic liver injury and define new therapeutic targets. Lieber-DeCarli diet (LD) and Meadows-Cook diet (MC) are the most accepted models of chronic alcohol consumption. It is unclear how similar these models are at the cellular, immunologic, and transcriptome levels. We investigated the common and specific pathways of LD and MC models. Livers from LD and MC mice were subjected to histologic changes, hepatic leukocyte population, hepatic transcripts level related to leukocyte recruitment, and hepatic RNA-seq analysis. Cross-species comparison was performed using the alcoholic liver disease (ALD) transcriptomic public dataset. Despite LD mice have increased liver injury and steatosis by alcohol exposure, the number of CD45
+ cells were reduced. Opposite, MC mice have an increased number of monocytes/liver by alcohol. The pattern of chemokine gradient, adhesion molecules, and cytokine transcripts is highly specific for each model, not shared with advanced human alcoholic liver disease. Moreover, hepatic RNA-seq revealed a limited and restricted number of shared genes differentially changed by alcohol exposure in these 2 models. Thus, mechanisms involved in alcohol tissue injury are model-dependent at multiple levels and raise the consideration of significant pathophysiological diversity of human alcoholic liver injury.- Published
- 2020
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17. Emerging agents and regimens for treatment of relapsed and refractory acute myeloid leukemia.
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Cui L, Liu Y, Pang Y, Qian T, Quan L, Cheng Z, Dai Y, Ye X, Pang Y, Shi J, Ke X, Wu D, and Fu L
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- Antineoplastic Combined Chemotherapy Protocols pharmacology, Combined Modality Therapy methods, Combined Modality Therapy trends, Disease-Free Survival, Drug Resistance, Neoplasm, Hematopoietic Stem Cell Transplantation trends, Humans, Immunotherapy trends, Induction Chemotherapy methods, Induction Chemotherapy trends, Leukemia, Myeloid, Acute mortality, Leukemia, Myeloid, Acute pathology, Neoplasm Recurrence, Local epidemiology, Neoplasm Recurrence, Local pathology, Randomized Controlled Trials as Topic, Transplantation Conditioning methods, Transplantation Conditioning trends, Transplantation, Homologous, Treatment Outcome, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Hematopoietic Stem Cell Transplantation methods, Immunotherapy methods, Leukemia, Myeloid, Acute therapy, Neoplasm Recurrence, Local therapy
- Abstract
Relapsed and refractory acute myeloid leukemia (R/R AML) has complicated pathogenesis. Its treatment is complicated, and the prognosis is poor. So far, there is no consensus on what is the optimal treatment strategy. With the deepening of research, new chemotherapy regimens, new small molecule inhibitors, and immunotherapy have been increasingly applied to clinical trials, providing more possibilities for the treatment of R/R AML. The most effective treatment for patients who achieve complete remission after recurrence is still sequential conditioning therapy followed by allogeneic hematopoietic cell transplantation. Finding the best combination of treatments is still an important goal for the future.
- Published
- 2020
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18. Prognostic value of the FUT family in acute myeloid leukemia.
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Dai Y, Cheng Z, Pang Y, Jiao Y, Qian T, Quan L, Cui L, Liu Y, Si C, Chen J, Ye X, Chen J, Shi J, Wu D, Zhang X, and Fu L
- Subjects
- Adult, Aged, Aged, 80 and over, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Bone Marrow pathology, Disease-Free Survival, Female, Follow-Up Studies, Humans, Kaplan-Meier Estimate, Leukemia, Myeloid, Acute mortality, Leukemia, Myeloid, Acute pathology, Leukemia, Myeloid, Acute therapy, Male, Middle Aged, Neoplasm Recurrence, Local genetics, Prognosis, Risk Factors, Transplantation, Homologous, Young Adult, Fucosyltransferases genetics, Gene Expression Regulation, Leukemic, Hematopoietic Stem Cell Transplantation, Leukemia, Myeloid, Acute genetics, Neoplasm Recurrence, Local epidemiology
- Abstract
Genetic abnormalities are more frequently viewed as prognostic markers in acute myeloid leukemia (AML) in recent years. Fucosylation, catalyzed by fucosyltransferases (FUTs), is a post-translational modification that widely exists in cancer cells. However, the expression and clinical implication of the FUT family (FUT1-11) in AML has not been investigated. From the Cancer Genome Atlas database, a total of 155 AML patients with complete clinical characteristics and FUT1-11 expression data were included in our study. In patients who received chemotherapy alone showed that high expression levels of FUT3, FUT6, and FUT7 had adverse effects on event-free survival (EFS) and overall survival (OS) (all P < 0.05), whereas high FUT4 expression had favorable effects on EFS and OS (all P < 0.01). However, in the allogeneic hematopoietic stem cell transplantation (allo-HSCT) group, we only found a significant difference in EFS between the high and low FUT3 expression subgroups (P = 0.047), while other FUT members had no effect on survival. Multivariate analysis confirmed that high FUT4 expression was an independent favorable prognostic factor for both EFS (HR = 0.423, P = 0.001) and OS (HR = 0.398, P < 0.001), whereas high FUT6 expression was an independent risk factor for both EFS (HR = 1.871, P = 0.017) and OS (HR = 1.729, P = 0.028) in patients who received chemotherapy alone. Moreover, we found that patients with low FUT4 and high FUT6 expressions had the shortest EFS and OS (P < 0.05). Our study suggests that high expressions of FUT3/6/7 predict poor prognosis, high FUT4 expression indicates good prognosis in AML; FUT6 and FUT4 have the best prognosticating profile among them, but their effects could be neutralized by allo-HSCT.
- Published
- 2020
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19. High IFITM3 expression predicts adverse prognosis in acute myeloid leukemia.
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Liu Y, Lu R, Cui W, Pang Y, Liu C, Cui L, Qian T, Quan L, Dai Y, Jiao Y, Pan Y, Ye X, Shi J, Cheng Z, and Fu L
- Subjects
- Adult, Aged, Aged, 80 and over, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Biomarkers, Tumor analysis, Bone Marrow pathology, Datasets as Topic, Disease-Free Survival, Female, Gene Expression Regulation, Leukemic, Humans, Kaplan-Meier Estimate, Leukemia, Myeloid, Acute mortality, Leukemia, Myeloid, Acute pathology, Male, Membrane Proteins analysis, Middle Aged, Neoplasm Recurrence, Local genetics, Neoplasm Recurrence, Local prevention & control, Prognosis, RNA-Binding Proteins analysis, Risk Factors, Transplantation, Homologous, Young Adult, Biomarkers, Tumor genetics, Hematopoietic Stem Cell Transplantation, Leukemia, Myeloid, Acute genetics, Membrane Proteins genetics, Neoplasm Recurrence, Local epidemiology, RNA-Binding Proteins genetics
- Abstract
Acute myeloid leukemia (AML) is a malignancy caused by the uncontrolled and dysregulated clonal expansion of abnormal myeloid primordial cells. In general, the prognosis of AML remains poor despite new discoveries in its pathogenesis and treatment. It is crucial to find early and sensitive biomarkers and continue to explore active targeted treatments. Interferon-induced transmembrane protein (IFITM) family is an important part of the interferon signaling pathway and participate in the regulation of immune cell signaling, adhesion, cancer, and liver cell migration. However, the clinical and prognostic value of the IFITM family in AML has rarely been studied. We screened The Cancer Genome Atlas database and found 155 AML patients with IFITM family (IFITM1-5) expression data. In patients who only received chemotherapy, those with high IFITM3 expression had significantly shorter event-free survival (EFS) and overall survival (OS) than patients with low expression (all P < 0.05). Multivariate analysis demonstrated that high IFITM3 expression was an independent risk factor for EFS and OS in patients only received chemotherapy (all P < 0.05). In patients who underwent allogeneic hematopoietic stem cell transplantation (allo-HSCT), however, all IFITM members had no impact on either EFS or OS. In conclusion, our study elucidated that high IFITM3 expression could be an adverse prognostic factor for AML, whose effect might be overcome by allo-HSCT.
- Published
- 2020
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20. A New Picture of the Global Impacts of El Nino-Southern Oscillation.
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Lin J and Qian T
- Abstract
The El Nino-Southern Oscillation (ENSO) is the dominant interannual variability of Earth's climate system and plays a central role in global climate prediction. Outlooks of ENSO and its impacts often follow a two-tier approach: predicting ENSO sea surface temperature anomaly in tropical Pacific and then predicting its global impacts. However, the current picture of ENSO global impacts widely used by forecasting centers and atmospheric science textbooks came from two earliest surface station datasets complied 30 years ago, and focused on the extreme phases rather than the whole ENSO lifecycle. Here, we demonstrate a new picture of the global impacts of ENSO throughout its whole lifecycle based on the rich latest satellite, in situ and reanalysis datasets. ENSO impacts are much wider than previously thought. There are significant impacts unknown in the previous picture over Europe, Africa, Asia and North America. The so-called "neutral years" are not neutral, but are associated with strong sea surface temperature anomalies in global oceans outside the tropical Pacific, and significant anomalies of land surface air temperature and precipitation over all the continents.
- Published
- 2019
- Full Text
- View/download PDF
21. Switch Between El Nino and La Nina is Caused by Subsurface Ocean Waves Likely Driven by Lunar Tidal Forcing.
- Author
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Lin J and Qian T
- Abstract
The El Nino-Southern Oscillation (ENSO) is the dominant interannual variability of Earth's climate system, and strongly modulates global temperature, precipitation, atmospheric circulation, tropical cyclones and other extreme events. However, forecasting ENSO is one of the most difficult problems in climate sciences affecting both interannual climate prediction and decadal prediction of near-term global climate change. The key question is what cause the switch between El Nino and La Nina. For the past 30 years, ENSO forecasts have been limited to short lead times after ENSO sea surface temperature (SST) anomaly has already developed, but unable to predict the switch between El Nino and La Nina. Here, we demonstrate that the switch between El Nino and La Nina is caused by a subsurface ocean wave propagating from western Pacific to central and eastern Pacific and then triggering development of SST anomaly. This is based on analysis of all ENSO events in the past 136 years using multiple long-term observational datasets. The wave's slow phase speed and decoupling from atmosphere indicate that it is a forced wave. Further analysis of Earth's angular momentum budget and NASA's Apollo Landing Mirror Experiment suggests that the subsurface wave is likely driven by lunar tidal gravitational force.
- Published
- 2019
- Full Text
- View/download PDF
22. α-Parvin promotes breast cancer progression and metastasis through interaction with G3BP2 and regulation of TWIST1 signaling.
- Author
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Sun Y, Ding Y, Guo C, Liu C, Ma P, Ma S, Wang Z, Liu J, Qian T, Ma L, Deng Y, and Wu C
- Subjects
- Adaptor Proteins, Signal Transducing, Animals, Breast Neoplasms genetics, Breast Neoplasms metabolism, Cells, Cultured, Disease Progression, Female, Gene Expression Regulation, Neoplastic, HEK293 Cells, Humans, Mice, Mice, Inbred BALB C, Mice, Nude, Microfilament Proteins genetics, Microfilament Proteins metabolism, Neoplasm Metastasis, Protein Binding, RNA-Binding Proteins, Signal Transduction physiology, Breast Neoplasms pathology, Carrier Proteins metabolism, Microfilament Proteins physiology, Nuclear Proteins genetics, Twist-Related Protein 1 genetics
- Abstract
Identification of molecular alterations driving breast cancer progression is critical for the development of effective therapy. In this study, we show that the level of α-parvin is elevated in triple-negative breast cancer cells. The depletion of α-parvin from triple-negative breast cancer cells effectively inhibits breast cancer cell growth, migration, and invasion in vitro, and tumor progression and metastasis in vivo. At the molecular level, we identify Ras-GTPase-activing protein SH3-domain-binding protein 2 (G3BP2) as an α-parvin-binding protein. Knockdown of α-parvin promotes G3BP2 interaction with TWIST1, increases ubiquitination and proteasome-dependent degradation of TWIST1, and consequently reduces the cellular level of TWIST1 and its downstream signaling. Importantly, the depletion of G3BP2 reverses the reduction in the level and signaling of TWIST1 and the suppression of breast cancer progression induced by the loss of α-parvin. Furthermore, the re-expression of an α-parvin mutant in which the G3BP2-binding site is ablated, unlike that of wild-type α-parvin, in α-parvin-deficient breast cancer cells, is unable to restore the level and signaling of TWIST1 and promote breast cancer progression. Finally, we show that protein level of α-parvin is highly positively correlated with that of TWIST1 in human triple-negative breast cancer patients. Our studies reveal a novel signaling pathway consisting of α-parvin, G3BP2, and TWIST1 that regulates breast cancer progression and metastasis, and suggest that the activation of this signaling pathway is a key factor for driving the progression and poor clinical outcome of human ER-negative breast cancer.
- Published
- 2019
- Full Text
- View/download PDF
23. Resting-state brain information flow predicts cognitive flexibility in humans.
- Author
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Chén OY, Cao H, Reinen JM, Qian T, Gou J, Phan H, De Vos M, and Cannon TD
- Subjects
- Adult, Connectome, Female, Humans, Magnetic Resonance Imaging, Male, Models, Neurological, Models, Psychological, Rest, Signal Processing, Computer-Assisted, Young Adult, Brain diagnostic imaging, Brain physiology, Cognition physiology
- Abstract
The human brain is a dynamic system, where communication between spatially distinct areas facilitates complex cognitive functions and behaviors. How information transfers between brain regions and how it gives rise to human cognition, however, are unclear. In this article, using resting-state functional magnetic resonance imaging (fMRI) data from 783 healthy adults in the Human Connectome Project (HCP) dataset, we map the brain's directed information flow architecture through a Granger-Geweke causality prism. We demonstrate that the information flow profiles in the general population primarily involve local exchanges within specialized functional systems, long-distance exchanges from the dorsal brain to the ventral brain, and top-down exchanges from the higher-order systems to the primary systems. Using an information flow map discovered from 550 subjects, the individual directed information flow profiles can significantly predict cognitive flexibility scores in 233 novel individuals. Our results provide evidence for directed information network architecture in the cerebral cortex, and suggest that features of the information flow configuration during rest underpin cognitive ability in humans.
- Published
- 2019
- Full Text
- View/download PDF
24. Observation of unconventional chiral fermions with long Fermi arcs in CoSi.
- Author
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Rao Z, Li H, Zhang T, Tian S, Li C, Fu B, Tang C, Wang L, Li Z, Fan W, Li J, Huang Y, Liu Z, Long Y, Fang C, Weng H, Shi Y, Lei H, Sun Y, Qian T, and Ding H
- Abstract
Chirality-the geometric property of objects that do not coincide with their mirror image-is found in nature, for example, in molecules, crystals, galaxies and life forms. In quantum field theory, the chirality of a massless particle is defined by whether the directions of its spin and motion are parallel or antiparallel. Although massless chiral fermions-Weyl fermions-were predicted 90 years ago, their existence as fundamental particles has not been experimentally confirmed. However, their analogues have been observed as quasiparticles in condensed matter systems. In addition to Weyl fermions
1-4 , theorists have proposed a number of unconventional (that is, beyond the standard model) chiral fermions in condensed matter systems5-8 , but direct experimental evidence of their existence is still lacking. Here, by using angle-resolved photoemission spectroscopy, we reveal two types of unconventional chiral fermion-spin-1 and charge-2 fermions-at the band-crossing points near the Fermi level in CoSi. The projections of these chiral fermions on the (001) surface are connected by giant Fermi arcs traversing the entire surface Brillouin zone. These chiral fermions are enforced at the centre or corner of the bulk Brillouin zone by the crystal symmetries, making CoSi a system with only one pair of chiral nodes with large separation in momentum space and extremely long surface Fermi arcs, in sharp contrast to Weyl semimetals, which have multiple pairs of Weyl nodes with small separation. Our results confirm the existence of unconventional chiral fermions and provide a platform for exploring the physical properties associated with chiral fermions.- Published
- 2019
- Full Text
- View/download PDF
25. Directed Differentiation of Human Pluripotent Stem Cells to Podocytes under Defined Conditions.
- Author
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Qian T, Hernday SE, Bao X, Olson WR, Panzer SE, Shusta EV, and Palecek SP
- Subjects
- Cells, Cultured, Humans, Mesoderm cytology, Mesoderm metabolism, Nanog Homeobox Protein genetics, Nanog Homeobox Protein metabolism, Octamer Transcription Factor-3 genetics, Octamer Transcription Factor-3 metabolism, Phenotype, Pluripotent Stem Cells metabolism, Podocytes metabolism, Primitive Streak cytology, Primitive Streak metabolism, Wnt Proteins metabolism, Cell Differentiation, Pluripotent Stem Cells cytology, Podocytes cytology
- Abstract
A major cause of chronic kidney disease (CKD) is glomerular disease, which can be attributed to a spectrum of podocyte disorders. Podocytes are non-proliferative, terminally differentiated cells. Thus, the limited supply of primary podocytes impedes CKD research. Differentiation of human pluripotent stem cells (hPSCs) into podocytes has the potential to produce podocytes for disease modeling, drug screening, and cell therapies. In the podocyte differentiation process described here, hPSCs are first induced to primitive streak-like cells by activating canonical Wnt signaling. Next, these cells progress to mesoderm precursors, proliferative nephron progenitors, and eventually become mature podocytes by culturing in a serum-free medium. Podocytes generated via this protocol adopt podocyte morphology, express canonical podocyte markers, and exhibit podocyte phenotypes, including albumin uptake and TGF-β1 triggered cell death. This study provides a simple, defined strategy to generate podocytes for in vitro modeling of podocyte development and disease or for cell therapies.
- Published
- 2019
- Full Text
- View/download PDF
26. Electronic structure of SrSn 2 As 2 near the topological critical point.
- Author
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Rong LY, Ma JZ, Nie SM, Lin ZP, Li ZL, Fu BB, Kong LY, Zhang XZ, Huang YB, Weng HM, Qian T, Ding H, and Tai RZ
- Abstract
Topological materials with exotic quantum properties are promising candidates for quantum spin electronics. Different classes of topological materials, including Weyl semimetal, topological superconductor, topological insulator and Axion insulator, etc., can be connected to each other via quantum phase transition. For example, it is believed that a trivial band insulator can be twisted into topological phase by increasing spin-orbital coupling or changing the parameters of crystal lattice. With the results of LDA calculation and measurement by angle-resolved photoemission spectroscopy (ARPES), we demonstrate in this work that the electronic structure of SrSn
2 As2 single crystal has the texture of band inversion near the critical point. The results indicate the possibility of realizing topological quantum phase transition in SrSn2 As2 single crystal and obtaining different exotic quantum states.- Published
- 2017
- Full Text
- View/download PDF
27. Enhanced thermal conductivity of form-stable phase change composite with single-walled carbon nanotubes for thermal energy storage.
- Author
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Qian T, Li J, Feng W, and Nian H
- Abstract
A striking contrast in the thermal conductivities of polyethylene glycol (PEG)/diatomite form-stable phase change composite (fs-PCC) with single-walled carbon nanotubes (SWCNs) as nano-additive has been reported in our present study. Compared to the pure PEG, the thermal conductivity of the prepared fs-PCC has increased from 0.24 W/mK to 0.87 W/Mk with a small SWCNs loading of 2 wt%. SWCNs are decorated on the inner surface of diatomite pores whilst retaining its porous structure. Compared to PEG/diatomite fs-PCC, the melting and solidification time of the PEG/diatomite/SWCNs fs-PCC are respectively decreased by 54.7% and 51.1%, and its thermal conductivity is 2.8 times higher. The composite can contain PEG as high as 60 wt% and maintain its original shape perfectly without any PEG leakage after subjected to 200 melt-freeze cycles. DSC results indicates that the melting point of the PEG/diatomite/SWCNs fs-PCC shifts to a lower temperature while the solidification point shifts to a higher temperature due to the presence of SWCNs. Importantly, the use of SWCNs is found to have clear beneficial effects for enhancing the thermal conductivity and thermal storage/release rates, without affecting thermal properties, chemical compatibility and thermal stability. The prepared PEG/diatomite/SWCNs fs-PCC exhibits excellent chemical and thermal durability and has potential application in solar thermal energy storage and solar heating.
- Published
- 2017
- Full Text
- View/download PDF
28. Crystal Structure of StnA for the Biosynthesis of Antitumor Drug Streptonigrin Reveals a Unique Substrate Binding Mode.
- Author
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Qian T, Wo J, Zhang Y, Song Q, Feng G, Luo R, Lin S, Wu G, and Chen HF
- Subjects
- Antibiotics, Antineoplastic pharmacokinetics, Bacterial Proteins ultrastructure, Carboxylic Ester Hydrolases ultrastructure, Catalytic Domain, Escherichia coli, Molecular Conformation, Molecular Dynamics Simulation, Sequence Analysis, Protein, Streptonigrin chemistry, Substrate Specificity, Antibiotics, Antineoplastic chemistry, Bacterial Proteins chemistry, Carboxylic Ester Hydrolases chemistry, Streptonigrin biosynthesis
- Abstract
Streptonigrin methylesterase A (StnA) is one of the tailoring enzymes that modify the aminoquinone skeleton in the biosynthesis pathway of Streptomyces species. Although StnA has no significant sequence homology with the reported α/β-fold hydrolases, it shows typical hydrolytic activity in vivo and in vitro. In order to reveal its functional characteristics, the crystal structures of the selenomethionine substituted StnA (SeMet-StnA) and the complex (S185A mutant) with its substrate were resolved to the resolution of 2.71 Å and 2.90 Å, respectively. The overall structure of StnA can be described as an α-helix cap domain on top of a common α/β hydrolase domain. The substrate methyl ester of 10'-demethoxystreptonigrin binds in a hydrophobic pocket that mainly consists of cap domain residues and is close to the catalytic triad Ser185-His349-Asp308. The transition state is stabilized by an oxyanion hole formed by the backbone amides of Ala102 and Leu186. The substrate binding appears to be dominated by interactions with several specific hydrophobic contacts and hydrogen bonds in the cap domain. The molecular dynamics simulation and site-directed mutagenesis confirmed the important roles of the key interacting residues in the cap domain. Structural alignment and phylogenetic tree analysis indicate that StnA represents a new subfamily of lipolytic enzymes with the specific binding pocket located at the cap domain instead of the interface between the two domains.
- Published
- 2017
- Full Text
- View/download PDF
29. A new insight into the immobilization mechanism of Zn on biochar: the role of anions dissolved from ash.
- Author
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Qian T, Wang Y, Fan T, Fang G, and Zhou D
- Abstract
Biochar is considered to be a promising material for heavy metal immobilization in soil. However, the immobilization mechanisms of Zn(2+) on biochars derived from many common waste biomasses are not completely understood. Herein, biochars (denoted as PN350, PN550, WS350, and WS550) derived from pine needle (PN) and wheat straw (WS) were prepared at two pyrolysis temperatures (350 °C and 550 °C). The immobilization behaviors and mechanisms of Zn(2+) on these biochars were systematically investigated. The results show that compared with biochars produced at low temperature, biochars produced at high temperature contained higher amounts of ash and exhibited much higher sorption capacities of Zn(2+). By using Zn K-edge EXAFS spectroscopy, we find that the formation of various Zn precipitates/minerals, which was caused by the release of OH(-), CO3(2-), and Si species from biochar, was the immobilization mechanism of Zn(2+) on PN and WS biochars. Hydrozincite and Zn(OH)2 were the main species formed on PN350, PN550, and WS350; while on WS550, besides hydrozincite, a large fraction of hemimorphite was formed. The occurrence of hydrozincite and hemimorphite on biochar during Zn(2+) immobilization is firstly reported in our study, which provides a new insight into the immobilization mechanism of Zn(2+) on biochar.
- Published
- 2016
- Full Text
- View/download PDF
30. Pore structure modified diatomite-supported PEG composites for thermal energy storage.
- Author
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Qian T, Li J, and Deng Y
- Abstract
A series of novel composite phase change materials (PCMs) were tailored by blending PEG and five kinds of diatomite via a vacuum impregnation method. To enlarge its pore size and specific surface area, different modification approaches including calcination, acid treatment, alkali leaching and nano-silica decoration on the microstructure of diatomite were outlined. Among them, 8 min of 5 wt% NaOH dissolution at 70 °C has been proven to be the most effective and facile. While PEG melted during phase transformation, the maximum load of PEG could reach 70 wt.%, which was 46% higher than that of the raw diatomite. The apparent activation energy of PEG in the composite was 1031.85 kJ·mol(-1), which was twice higher than that of the pristine PEG. Moreover, using the nano-silica decorated diatomite as carrier, the maximum PEG load was 66 wt%. The composite PCM was stable in terms of thermal and chemical manners even after 200 cycles of melting and freezing. All results indicated that the obtained composite PCMs were promising candidate materials for building applications due to its large latent heat, suitable phase change temperature, excellent chemical compatibility, improved supercooling extent, high thermal stability and long-term reliability.
- Published
- 2016
- Full Text
- View/download PDF
31. Parcellating cortical functional networks in individuals.
- Author
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Wang D, Buckner RL, Fox MD, Holt DJ, Holmes AJ, Stoecklein S, Langs G, Pan R, Qian T, Li K, Baker JT, Stufflebeam SM, Wang K, Wang X, Hong B, and Liu H
- Subjects
- Adolescent, Adult, Brain Mapping methods, Female, Humans, Male, Middle Aged, Young Adult, Cerebral Cortex physiology, Magnetic Resonance Imaging methods, Nerve Net physiology
- Abstract
The capacity to identify the unique functional architecture of an individual's brain is a crucial step toward personalized medicine and understanding the neural basis of variation in human cognition and behavior. Here we developed a cortical parcellation approach to accurately map functional organization at the individual level using resting-state functional magnetic resonance imaging (fMRI). A population-based functional atlas and a map of inter-individual variability were employed to guide the iterative search for functional networks in individual subjects. Functional networks mapped by this approach were highly reproducible within subjects and effectively captured the variability across subjects, including individual differences in brain lateralization. The algorithm performed well across different subject populations and data types, including task fMRI data. The approach was then validated by invasive cortical stimulation mapping in surgical patients, suggesting potential for use in clinical applications.
- Published
- 2015
- Full Text
- View/download PDF
32. Enhanced thermal properties of novel shape-stabilized PEG composite phase change materials with radial mesoporous silica sphere for thermal energy storage.
- Author
-
Min X, Fang M, Huang Z, Liu Y, Huang Y, Wen R, Qian T, and Wu X
- Abstract
Radial mesoporous silica (RMS) sphere was tailor-made for further applications in producing shape-stabilized composite phase change materials (ss-CPCMs) through a facile self-assembly process using CTAB as the main template and TEOS as SiO2 precursor. Novel ss-CPCMs composed of polyethylene glycol (PEG) and RMS were prepared through vacuum impregnating method. Various techniques were employed to characterize the structural and thermal properties of the ss-CPCMs. The DSC results indicated that the PEG/RMS ss-CPCM was a promising candidate for building thermal energy storage applications due to its large latent heat, suitable phase change temperature, good thermal reliability, as well as the excellent chemical compatibility and thermal stability. Importantly, the possible formation mechanisms of both RMS sphere and PEG/RMS composite have also been proposed. The results also indicated that the properties of the PEG/RMS ss-CPCMs are influenced by the adsorption limitation of the PEG molecule from RMS sphere with mesoporous structure and the effect of RMS, as the impurities, on the perfect crystallization of PEG.
- Published
- 2015
- Full Text
- View/download PDF
33. Subcellular and Dynamic Coordination between Src Activity and Cell Protrusion in Microenvironment.
- Author
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Zhuo Y, Qian T, Wu Y, Seong J, Gong Y, Ma H, Wang Y, and Lu S
- Subjects
- Cell Movement genetics, Cell Polarity genetics, Cell Surface Extensions genetics, Endothelial Cells metabolism, Fluorescence Resonance Energy Transfer, Humans, Neovascularization, Physiologic genetics, src-Family Kinases genetics, Cellular Microenvironment genetics, Endothelial Cells cytology, Wound Healing genetics, src-Family Kinases metabolism
- Abstract
Migration of endothelial cells is essential for wound healing and angiogenesis. Src kinase activity plays important roles at the protrusions of migrating endothelial cells. However, the spatiotemporal coordination between Src kinase activity and the protrusion of cell edge remains unclear. Therefore, we investigate these coordinated molecular events at the initiation of cell migration, by integrating microfabrication, fluorescence resonance energy transfer (FRET)-based biosensors, and automated computational image analysis. We demonstrate that the physical release of restrictive micropattern triggered a significant decrease of Src activity at the protrusive edge of endothelial cells. Computational cross-correlation analysis reveals that the decrease of Src activity occurred earlier in time, and was well-coordinated with the protrusion of cell edge in polarized cells, but not in non-polarized cells. These results suggest that the spatiotemporal control of Src kinase activity is well-coordinated with cell polarization and protrusion in endothelial cells upon the release of physical constraint, as that experienced by endothelial cells sprouting from stiff tumor micro-environment during angiogenesis. Therefore, our integrative approach enabled the discovery of a new model where Src is de-activated in coordination with membrane protrusion, providing important insights into the regulation of endothelial migration and angiogenesis.
- Published
- 2015
- Full Text
- View/download PDF
34. Id1 enhances RING1b E3 ubiquitin ligase activity through the Mel-18/Bmi-1 polycomb group complex.
- Author
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Qian T, Lee JY, Park JH, Kim HJ, and Kong G
- Subjects
- Blotting, Western, Cell Line, Tumor, DNA-Binding Proteins genetics, Epigenesis, Genetic genetics, Gene Expression, Histones metabolism, Humans, Inhibitor of Differentiation Protein 1 genetics, Nuclear Proteins genetics, Polycomb Repressive Complex 1, Polycomb-Group Proteins, Proto-Oncogene Proteins genetics, Repressor Proteins genetics, Reverse Transcriptase Polymerase Chain Reaction, Signal Transduction genetics, Transfection, Ubiquitin-Protein Ligases genetics, Ubiquitination, DNA-Binding Proteins metabolism, Gene Expression Regulation, Neoplastic genetics, Inhibitor of Differentiation Protein 1 metabolism, Nuclear Proteins metabolism, Proto-Oncogene Proteins metabolism, Repressor Proteins metabolism, Ubiquitin-Protein Ligases metabolism
- Abstract
The helix-loop-helix inhibitor of differentiation and DNA binding (Id1) is well known as an oncogene in various tumors. Although it has been reported that Id1 promotes several oncogenic processes, it is still unclear whether Id1 functions through epigenetic transcriptional regulation. In this study, we examined the effect of Id1 on polycomb group (PcG) proteins, which are crucial epigenetic gene silencers, and found that Id1 regulated the expression of Mel-18 and Bmi-1, both of which belong to polycomb repressive complex 1. We also confirmed that Id1 induced Mel-18 downregulation, which was mediated by the Akt pathway, and consequently upregulated the transcription of its target gene, c-Myc. Using a promoter-reporter, we demonstrated that Id1 regulated Bmi-1 transcription through c-Myc binding to its E-box in the promoter. Finally, we examined the activity of E3 ligase RING1b, whose catalytic activity is increased by binding with the RING finger protein Bmi-1, and found that Id1 overexpression enhanced RING1b E3 ligase activity leading to accumulation of H2A ubiquitination and ubiquitin/proteasome-mediated degradation of geminin. Taken together, our study provided a novel link between Id1 and PcG proteins and suggested that Id1 may contribute to tumor development through PcG-mediated epigenetic regulation.
- Published
- 2010
- Full Text
- View/download PDF
35. Id-1 activates Akt-mediated Wnt signaling and p27(Kip1) phosphorylation through PTEN inhibition.
- Author
-
Lee JY, Kang MB, Jang SH, Qian T, Kim HJ, Kim CH, Kim Y, and Kong G
- Subjects
- Breast Neoplasms metabolism, Breast Neoplasms pathology, Cell Line, Tumor, Enzyme Inhibitors pharmacology, Humans, Models, Biological, Phosphorylation, Promoter Regions, Genetic, Subcellular Fractions, TCF Transcription Factors metabolism, Cyclin-Dependent Kinase Inhibitor p27 metabolism, Gene Expression Regulation, Neoplastic, Inhibitor of Differentiation Protein 1 metabolism, PTEN Phosphohydrolase antagonists & inhibitors, PTEN Phosphohydrolase metabolism, Proto-Oncogene Proteins c-akt metabolism, Wnt Proteins metabolism
- Abstract
Inhibitor of differentiation-1 (Id-1) has been accepted as a putative oncogene to promote oncogenic processes through inactivation of tumor suppressors and activation of growth promoting pathways. Here, we show that Id-1 activates the Akt pathway by inhibition of phosphatase and tensin homologue deleted on chromosome 10 (PTEN) transcription through downregulation of p53. Id-1 negatively regulated both p53 and PTEN at the transcriptional level. In promoter assay with serial deletion and chromatin immunoprecipitation assay, the binding of p53 to the PTEN promoter was reduced by Id-1, suggesting that Id-1 regulates PTEN transcription through its p53 modulation. This led to Akt phosphorylation at Ser473 and the activation of the Akt-mediated canonical Wnt signaling pathway. The glycogen synthase kinase-3beta phosphorylation at Ser9, stabilization and nuclear localization of beta-catenin, T-cell factor (TCF)/lymphoid enhancer factor transactivation activity and cyclin D1 expression were enhanced by Id-1. On the other hand, Akt-mediated p27(Kip1) phosphorylation at Thr157 and its cytosolic localization were also increased in Id-1 overexpressing MCF7 cells. In conclusion, our results disclose Id-1 as a novel PTEN inhibitor that could activate the Akt pathway and its downstream effectors, the Wnt/TCF pathway and p27(Kip1) phosphorylation and suggest that the oncogenic function of Id-1 may be partly attributed to its PTEN inhibition in human breast carcinogenesis.
- Published
- 2009
- Full Text
- View/download PDF
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