1. Proteomic profiling of canine fibrosarcoma and adjacent peritumoral tissue
- Author
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Erin Beebe, Amiskwia Pöschel, Laura Kunz, Witold Wolski, Zahra Motamed, Daniela Meier, Franco Guscetti, Mirja C. Nolff, Enni Markkanen, and University of Zurich
- Subjects
Proteomics ,Cancer Research ,10253 Department of Small Animals ,Comparative oncology ,Human fibrosarcoma ,Soft-tissue sarcoma ,Laser-capture microdissection ,Fibrosarcoma characterization ,dog fibrosarcoma ,rare cancers ,adult-type fibrosarcoma not otherwise specified ,Fibrosarcoma ,10184 Institute of Veterinary Pathology ,10079 Institute of Veterinary Pharmacology and Toxicology ,Dogs ,Tandem Mass Spectrometry ,570 Life sciences ,biology ,Humans ,Animals ,Neoplasm Recurrence, Local ,Chromatography, Liquid - Abstract
Fibrosarcoma (FSA) are rare soft tissue tumors that display aggressive local behavior and invasive growth leading to high rates of tumor recurrence. While the low incidence in humans hampers detailed understanding of the disease, FSA are frequent in dogs and present potential models for the human condition. However, a lack of in-depth molecular characterization of FSA and unaffected peritumoral tissue (PTT) in both species impedes the translational potential of dogs. To address this shortcoming, we characterized canine FSA and matched skeletal muscle, adipose and connective tissue using laser-capture microdissection (LCM) and LC-MS/MS in 30 formalin-fixed paraffin embedded (FFPE) specimens. Principal component analysis of 3’530 different proteins detected across all samples clearly separates the four tissues, with several targets strongly differentiating tumor from all three PTTs. 25 proteins were exclusively found in tumor tissue in ≥80% of cases. Among these, CD68 (a macrophage marker), Optineurin (OPTN), Nuclear receptor coactivator 5 (NCOA5), RAP1GDS1 (Rap1 GTPase-GDP dissociation stimulator 1) and Stromal cell derived factor 2 like 1 (SDF2L1) were present in ≥90% of FSA. Protein expression across all FSA was highly homogeneous and characterized by MYC and TP53 signaling, hyperactive EIF2 and immune-related changes as well as strongly decreased oxidative phosphorylation and oxidative lipid metabolism. Finally, we demonstrate significant molecular homology between canine FSA and human soft-tissue sarcomas, emphasizing the relevance of studying canine FSA as a model for human FSA. In conclusion, we provide the first detailed overview of proteomic changes in FSA and surrounding PTT with relevance for the human disease., Neoplasia, 35, ISSN:1522-8002, ISSN:1476-5586
- Published
- 2023