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Cover crops (CCs) offer ecosystem benefits, yet their impact on subsequent crop yields varies with climate, soil, and management practices. Using the Decision Support System for Agrotechnology Transfer (DSSAT) at the University of Nebraska-Lincoln’s Eastern Nebraska Research, Education, and Extension Center (ENREEC), we identified optimal cereal rye management strategies focusing on planting, termination, and the intervals between CC termination and corn planting. Results showed minimal impact of CC management variations on corn yield, underscoring corn’s resilience to management changes. Delayed planting notably decreased CC biomass, nitrogen uptake, and biomass nitrogen content on average by 8.8%, 11%, and 9.2% for every five-day delay from 25 September. Every 5-day increase in the interval between CC termination and corn planting reduced biomass by 19.3%. Conversely, each 5-day delay in CC termination from 10 September to 10 October increased biomass by 30%, enhancing SOC accumulation. SOC changes over the 30-year simulation ranged from 5.8% to 7.7%, peaking with late May terminations. The earliest termination showed the highest nitrogen content in biomass (3.4%), with the lowest (0.69%) in mid-May. Our results demonstrate that strategic CC management supports soil health without negatively impacting corn yield in Eastern Nebraska, providing valuable insights for farmers and practitioners aiming to implement sustainable CC practices while preserving crop productivity.

Incorporating native perennial grasses adjacent to annual row crop systems managed on marginal lands can increase system resiliency by diversifying food and energy production. This study evaluated (1) soil organic C (SOC) and total N stocks (TN) under warm-season grass (WSG) monocultures and a low diversity mixture compared to an adjacent no-till continuous-corn system, and (2) WSG total above-ground biomass (AGB) in response to two levels of N fertilization from 2012 to 2017 in eastern Nebraska, USA. The WSG treatments consisted of (1) switchgrass (SWG), (2) big bluestem (BGB), and (3) low-diversity grass mixture (LDM; big bluestem, Indiangrass, and sideoat grama). Soils were sampled at fixed depth increments (0–120 cm) in the WSG plots and in the adjacent corn experiment in 2012 and 2017. Soil stocks (Mg ha−1) of SOC and TN were calculated on an equivalent soil mass (ESM) basis and compared within the three WSG treatments as well as between experiments (corn compared to the mean of all WSGs). Soil organic C and TN stocks within soil layers and cumulative stocks responded to the main effect of WSG (PWSG < 0.05) but were no different when comparing the WSGs to corn (Pexpt = NS). Both SOC/TN stocks and cumulative stocks were generally greater in the LDM compared to the BGB. Neither SOC nor TN changed over time under either the WSGs or corn. Warm-season grass AGB responded to a three-way interaction of year, N rate, and WSG (p = 0.0007). Decreases in AGB over time were significant across WSGs and N levels except for SWG at 56 kg N ha−1 and LDM at 112 kg N ha−1. Above-ground biomass was generally greater in the LDM after the first harvest year (2013). Results suggest that incorporating WSGs into marginal cropland can maintain SOC and TN stocks while providing a significant source of biomass to be used in energy production or in integrated livestock systems.

Diversifying agronomic production systems by combining crops and livestock (i.e., Integrated Crop Livestock systems; ICL) may help mitigate the environmental impacts of intensive single-commodity production. In addition, harvesting row-crop residues and/or perennial biomass could increase the multi-functionality of ICL systems as a potential source for second-generation bioenergy feedstock. Here, we evaluated non-CO2 soil greenhouse gas (GHG) emissions from both row-crop and perennial grass phases of a field-scale model ICL system established on marginally productive, poorly drained cropland in the western US Corn Belt. Soil emissions of nitrous oxide (N2O) and methane (CH4) were measured during the 2017–2019 growing seasons under continuous corn (Zea mays L.) and perennial grass treatments consisting of a common pasture species, ‘Newell’ smooth bromegrass (Bromus inermis L.), and two cultivars of switchgrass (Panicum virgatum L.), ‘Liberty’ and ‘Shawnee.’ In the continuous corn system, we evaluated the impact of stover removal by mechanical baling vs. livestock grazing for systems with and without winter cover crop, triticale (x Triticosecale neoblaringhemii A. Camus; hexaploid AABBRR). In perennial grasslands, we evaluated the effect of livestock grazing vs. no grazing. We found that (1) soil N2O emissions are generally higher in continuous corn systems than perennial grasslands due to synthetic N fertilizer use; (2) winter cover crop use had no effect on total soil GHG emissions regardless of stover management treatment; (3) stover baling decreased total soil GHG emissions, though grazing stover significantly increased emissions in one year; (4) grazing perennial grasslands tended to increase GHG emissions in pastures selected for forage quality, but were highly variable from year to year; (5) ICL systems that incorporate perennial grasses will provide the most effective GHG mitigation outcomes.

A major limitation to building credible soil carbon sequestration programs is the cost of measuring soil carbon change. Diffuse reflectance spectroscopy (DRS) is considered a viable low-cost alternative to traditional laboratory analysis of soil organic carbon (SOC). While numerous studies have shown that DRS can produce accurate and precise estimates of SOC across landscapes, whether DRS can detect subtle management induced changes in SOC at a given site has not been resolved. Here, we leverage archived soil samples from seven long-term research trials in the U.S. to test this question using mid infrared (MIR) spectroscopy coupled with the USDA-NRCS Kellogg Soil Survey Laboratory MIR spectral library. Overall, MIR-based estimates of SOC%, with samples scanned on a secondary instrument, were excellent with the root mean square error ranging from 0.10 to 0.33% across the seven sites. In all but two instances, the same statistically significant (p < 0.10) management effect was found using both the lab-based SOC% and MIR estimated SOC% data. Despite some additional uncertainty, primarily in the form of bias, these results suggest that large existing MIR spectral libraries can be operationalized in other laboratories for successful carbon monitoring.