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Optical density measurement has been used for decades to determine the microorganism concentration and more rarely for mammalian cells. Although this measurement can be carried out at any wavelength, studies report a limited number of measurement wavelengths, mainly around 600 nm, and no consensus seems to be emerging to propose an objective method for determining the optimum measurement wavelength for each microorganism. In this article, we propose a method for analyzing the absorbance spectra of ESKAPEE bacteria and determining the optimum measurement wavelength for each of them. The method is based on the analysis of the signal-to-noise ratio of the relationships between concentrations and optical densities when the measurement wavelength varies over the entire spectral range of the absorbance spectra measured for each bacterium. These optimum wavelengths range from 612 nm for Enterococcus faecium to 705 nm for Acinetobacter baumannii. The method can be directly applied to any bacteria, any culture method, and also to any biochemical substance with an absorbance spectrum without any particular feature such as an identified maximum.

The textural characteristics of rocks influence their petrophysical and mechanical properties. Such parameters largely control rock mass stability. The ability to evaluate both immediate and long-term rock behaviors based on the interaction between various parameters of rock texture, petrophysical and mechanical properties is therefore crucial to many geoengineering facilities. However, due to the common lack of high-quality core samples for geomechanics and rock texture laboratory tests, single and multivariable regression analyses are conducted between mechanical properties and textural characteristics based on experimental test data. This study presents a review of how rock texture characteristics influence the geomechanical properties of a rock, and summarizes the regression equations between two aspects. More specifically, a review of the available literature on the effects of mineralogy, grain size, grain shape, packing density, foliation index, porosity, degree of weathering, and other rock physical characteristics on geomechanics is presented. Similarly, a review of the literature discussing the failure criteria of anisotropic rocks, both continuous and discontinuous, is also presented. These reviews are accompanied by a comparison of the fundamentals of these methods, describing their equations and discussing their advantages and disadvantages. This exercise has the objective of providing better guidelines on how to use these criteria, allowing for safer underground excavations via an improved understanding of how rock texture parameters affects the mechanical behavior of rocks.

Despite numerous innovations, measuring bacteria concentrations on a routine basis is still time consuming and ensuring accurate measurements requires careful handling. Furthermore, it often requires sampling small volumes of bacteria suspensions which might be poorly representative of the real bacteria concentration. In this paper, we propose a spectroscopy measurement method based on a description of the absorption/attenuation spectra of ESKAPEE bacteria. Concentrations were measured with accuracies less than 2%. In addition, mixing the mathematical description of the absorption/attenuation spectra of mammalian T-cells and bacteria allows for the simultaneous measurements of both species’ concentrations. This method allows real-time, sampling-free and seeder-free measurement and can be easily integrated into a closed-system environment.

Advanced Therapy Medicinal Products are promising drugs for patients in therapeutic impasses. Their complex fabrication process implies regular quality controls to monitor cell concentration. Among the different methods available, optical techniques offer several advantages. Our study aims to measure cell concentration in real time in a potential closed-loop environment using white light spectroscopy and to test the possibility of simultaneously measuring concentrations of several species. By analyzing the shapes of the absorption spectra, this system allowed the quantification of T-cells with an accuracy of about 3% during 30 h of cultivation monitoring and 26 h of doubling time, coherent with what is expected for normal cell culture. Moreover, our system permitted concentration measurements for two species in reconstructed co-cultures of T-cells and Candida albicans yeasts. This method can now be applied to any single or co-culture, it allows real-time monitoring, and can be easily integrated into a closed system.

Due to inherent variability arising from unpredictable geological depositional and post-depositional processes, the geotechnical parameters of Laflamme sea clay deposits remain highly uncertain. This study aims to develop and apply a methodology to assess the uncertainties of geotechnical parameters using statistical distributions for a landslide-prone Saguenay Lac-Saint-Jean (SLSJ) region. We used the measured physical and mechanical parameters of Laflamme Sea clays of various locations in the SLSJ region to characterize the geotechnical parameters in a representative manner. Goodness-of-fit tests assign each physical and mechanical parameter a distribution function for their descriptive analysis. We found that the quality of these tests is significantly influenced by outliers. The detected outliers in the dataset considerably impact the distribution type and the uncertainties of the specific geotechnical parameter. Subsequently, appropriate distribution functions for each parameter were assigned after treating the outliers. The derived coefficient of variability values for the SLSJ region were significantly high in comparison to the literature with cone penetration test data being only the exception. Finally, the results indicated that the uncertainties of geotechnical parameters of the Saguenay-Lac-Saint-Jean region marine clays are high as compared to Scandinavian clays and are relatively comparable to other eastern Canadian clays.

The specific length of a tunnel (STL) and a new analytical model for calculating the block surface area of the rock mass are introduced. First, a method for determining the appropriate length of a tunnel for a numerical simulation is described. The length is then used to examine the correlation between the inflow rate to the tunnel and the block volume, the block surface area, and the fracture intensity (P32) through analytical and numerical modeling. The results indicate that the length of the tunnel should at least be equal to the least common multiple (LCM) of the apparent spacings of the joint sets at the wall of the tunnel to obtain the more reliable and immediate results for the inflow rate to a tunnel that is excavated in a fractured rock mass. A new analytical model was developed to calculate the block surface area and determine the essential joint set parameters, which include the dip, dip direction, and spacing. The determination of the rock block characteristics through numerical modeling requires considering the intact block for calculations. The results indicated that the inflow rate to the tunnel increased with an increase in fracture intensity and a decrease in block volume and surface area. The STL and the analytical model used for calculating the block surface area are validated through numerical simulations with 3DEC software version 7.0.

Knowledge of the stratigraphic architecture and geotechnical properties of surficial soil sediments is essential for geotechnical risk assessment. In the Saguenay study area, the Quaternary deposits consist of a basal till layer and heterogeneous post-glacial deposits. Considering the stratigraphic setting and soil type heterogeneity, a multistep stochastic methodology is developed for 3D geological modelling and quantification of the associated uncertainties. This methodology is adopted for regional studies and involves geostatistical interpolation and simulation methods. Empirical Bayesian kriging (EBK) is applied to generate the bedrock topography map and determine the thickness of the till sediments and their uncertainties. The locally varying mean and variance of the EBK method enable accounting for data complexity and moderate nonstationarity. Sequential indicator simulation is then performed to determine the occurrence probability of the discontinuous post-glacial sediments (clay, sand and gravel) on top of the basal till layer. The individual thickness maps of the discontinuous soil layers and uncertainties are generated in a probabilistic manner. The proposed stochastic framework is suitable for heterogeneous soil deposits characterised with complex surface and subsurface datasets.

Sensitive clays are known for producing retrogressive landslides, also called spread or flowslides. The key characteristics associated with the occurrence of these landslides on a sensitive clay slope must be assessed, and the potential retrogressive distance must be evaluated. Common risk analysis methods include empirical methods for estimating the distance of potential retrogression, analytical limit equilibrium methods, numerical modelling methods using the strength reduction technique, and the integration of a progressive failure mechanism into numerical methods. Methods developed for zoning purposes in Norway and Quebec provide conservative results in most cases, even if they don’t cover the worst cases scenario. A flowslide can be partially analysed using analytical limit equilibrium methods and numerical methods having strength reduction factor tools. Numerical modelling of progressive failure mechanisms using numerical methods can define the critical parameters of spread-type landslides, such as critical unloading and the retrogression distance of the failure. Continuous improvements to the large-deformation numerical modeling approach allow its application to all types of sensitive clay landslides.

Immuno-SPR-MS is the combination of immuno-sensors in biochip format with mass spectrometry. This association of instrumentation allows the detection and the quantification of proteins of interest by SPR and their molecular characterization by additional MS analysis. However, two major bottlenecks must be overcome for a wide diffusion of the SPR-MS analytical platform: (i) To warrant all the potentialities of MS, an enzymatic digestion step must be developed taking into account the spot formats on the biochip and (ii) the biological relevancy of such an analytical solution requires that biosensing must be performed in complex media. In this study, we developed a procedure for the detection and the characterization at ~1 µg/mL of the LAG3 protein spiked in human plasma. The analytical performances of this new method was established, particularly its specificity (S/N > 9) and sensitivity (100% of LAG3 identification with high significant mascot score >68 at the femtomole level). The collective and automated on-chip MALDI-MS imaging and analysis based on peptidic fragments opens numerous applications in the fields of proteomics and diagnosis.

The contribution focuses on the development of microresonant sensor solution integrated in microfluidic platform for the haemostasis assessment at realistic rheological flow conditions similar to the one in blood vessels. A multi-parameter sensor performs real time analysis of interactions between immobilized collagen and platelets. The detection and characterization of such interactions at controlled flow rates provide information to evaluate the dynamic of each step of primary haemostasis. The microresonant sensor concept was developed and is described in the contribution.