1. A Quantitative Global Proteomics Approach Identifies Candidate Urinary Biomarkers That Correlate With Intraductal Papillary Mucinous Neoplasm Dysplasia.
- Author
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Flick KF, Yip-Schneider MT, Sublette CM, Simpson RE, Colgate CL, Wu H, Soufi M, Dewitt JM, Mosley AL, Ceppa EP, Zhang J, and Schmidt CM
- Subjects
- Adenocarcinoma, Mucinous surgery, Aged, Biomarkers, Tumor urine, Carcinoma, Pancreatic Ductal surgery, Carcinoma, Papillary surgery, Chromatography, Liquid methods, Cluster Analysis, Female, Humans, Hyperplasia, Male, Middle Aged, Pancreas metabolism, Pancreas pathology, Pancreas surgery, Pancreatic Neoplasms surgery, Tandem Mass Spectrometry methods, Adenocarcinoma, Mucinous metabolism, Biomarkers, Tumor metabolism, Carcinoma, Pancreatic Ductal metabolism, Carcinoma, Papillary metabolism, Pancreatic Neoplasms metabolism, Proteomics methods
- Abstract
Objectives: A proteomic discovery study was performed to determine if urine possesses a unique biosignature that could form the basis for a noninvasive test able to predict intraductal papillary mucinous neoplasm (IPMN) dysplasia., Methods: Urine was collected from patients undergoing surgery for IPMN (72 low/moderate, 27 high-grade/invasive). Quantitative mass spectrometry-based proteomics was performed. Proteins of interest were identified by differential expression analysis followed by principal component analysis., Results: Proteomics identified greater than 4800 urinary proteins. Low/moderate and high-grade/invasive IPMN were distinguished by 188 proteins (P < 0.05). Following principal component analysis and heatmap visualization, vitamin D binding protein (DBP), apolipoprotein A1 (APOA1), and alpha-1 antitrypsin (A1AT) were selected. The proteomic abundance of DBP (median [interquartile range]) was significantly higher for high-grade/invasive than for low/moderate IPMN (219,735 [128,882-269,943] vs. 112,295 [77,905-180,773] normalized reporter ion intensity units; P = 0.001). Similarly, APOA1 was more abundant in the high-grade/invasive than low/moderate groups (235,420 [144,933-371,247] vs 150,095 [103,419-236,591]; P = 0.0007) as was A1AT (567,514 [358,544-774,801] vs 358,393 [260,850-477,882]; P = 0.0006)., Conclusions: Urinary DBP, APOA1, and A1AT represent potential biomarker candidates that may provide a noninvasive means of predicting IPMN dysplastic grade.
- Published
- 2020
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