18 results on '"Samei E"'
Search Results
2. Multivariate signal-to-noise ratio as a metric for characterizing spectral computed tomography.
- Author
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Rajagopal JR, Farhadi F, Saboury B, Sahbaee P, Negussie AH, Pritchard WF, Jones EC, and Samei E
- Subjects
- Multivariate Analysis, Phantoms, Imaging, Image Processing, Computer-Assisted methods, Signal-To-Noise Ratio, Tomography, X-Ray Computed methods
- Abstract
Objective. With the introduction of spectral CT techniques into the clinic, the imaging capacities of CT were expanded to multiple energy levels. Due to a variety of factors, the acquired signal in spectral CT datasets is shared between these images. Conventional image quality metrics assume independence between images which is not preserved within spectral CT datasets, limiting their utility for characterizing energy selective images. The purpose of this work was to develop a metrology to characterize energy selective images by incorporating the shared information between images within a spectral CT dataset. Approach. The signal-to-noise ratio (SNR) was extended into a multivariate space where each image within a spectral CT dataset was treated as a separate information channel. The general definition was applied to the specific case of contrast to define a multivariate contrast-to-noise ratio (CNR). The matrix contained two types of terms: a conventional CNR term which characterized image quality within each image in the spectral CT dataset and covariance weighted CNR (Covar-CNR) which characterized the contrast in each image relative to the covariance between images. Experimental data from an investigational photon-counting CT scanner was used to demonstrate the insight of this metrology. A cylindrical water phantom containing vials of iodine and gadolinium (2, 4, and 8 mg ml
-1 ) was imaged under conditions of variable tube current, tube voltage, and energy threshold. Two image series (threshold and bin images) containing two images each were defined based upon the contribution of photons to reconstructed images. Analysis of variance (ANOVA) was calculated between CNR terms and image acquisition variables. A multivariate regression was then fitted to experimental data. Main Results. Image type had a major difference on how Covar-CNR values were distributed. Bin images had a slightly higher mean and wider standard deviation (Covar-CNRlo : 3.38 ±17.25, Covar-CNRhi : 5.77 ± 30.64) compared to threshold images (Covar-CNRlo : 2.08 ±1.89, Covar-CNRhi : 3.45 ± 2.49) across all conditions. ANOVA found that each acquisition variable had a significant relationship with both Covar-CNR terms. The multivariate regression model suggested that material concentration had the largest impact on all CNR terms. Signficance. In this work, we described a theoretical framework to extend the SNR to a multivariate form that is able to characterize images independently and also provide insight regarding the relationship between images. Experimental data was used to demonstrate the insight that this metrology provides about image formation factors in spectral CT., (© 2024 Institute of Physics and Engineering in Medicine.)- Published
- 2024
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3. Surface-based anthropomorphic bone structures for use in high-resolution simulated medical imaging.
- Author
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Sauer TJ, McCabe C, Abadi E, Samei E, and Segars WP
- Subjects
- Adult, Humans, Male, Computer Simulation, Phantoms, Imaging, Bone and Bones diagnostic imaging, Tomography, X-Ray Computed methods, Algorithms
- Abstract
Objective. Virtual imaging trials enable efficient assessment and optimization of medical image devices and techniques via simulation rather than physical studies. These studies require realistic, detailed ground-truth models or phantoms of the relevant anatomy or physiology. Anatomical structures within computational phantoms are typically based on medical imaging data; however, for small and intricate structures (e.g. trabecular bone), it is not reasonable to use existing clinical data as the spatial resolution of the scans is insufficient. In this study, we develop a mathematical method to generate arbitrary-resolution bone structures within virtual patient models (XCAT phantoms) to model the appearance of CT-imaged trabecular bone. Approach . Given surface definitions of a bone, an algorithm was implemented to generate stochastic bicontinuous microstructures to form a network to define the trabecular bone structure with geometric and topological properties indicative of the bone. For an example adult male XCAT phantom (50th percentile in height and weight), the method was used to generate the trabecular structure of 46 chest bones. The produced models were validated in comparison with published properties of bones. The utility of the method was demonstrated with pilot CT and photon-counting CT simulations performed using the accurate DukeSim CT simulator on the XCAT phantom containing the detailed bone models. Main results . The method successfully generated the inner trabecular structure for the different bones of the chest, having quantiative measures similar to published values. The pilot simulations showed the ability of photon-counting CT to better resolve the trabecular detail emphasizing the necessity for high-resolution bone models. Significance. As demonstrated, the developed tools have great potential to provide ground truth simulations to access the ability of existing and emerging CT imaging technology to provide quantitative information about bone structures., (© 2023 Institute of Physics and Engineering in Medicine.)
- Published
- 2023
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4. Patient-specific Cardio-respiratory Motion Prediction in X-ray Angiography using LSTM Networks.
- Author
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Azizmohammadi F, Navarro Castellanos I, Miró J, Segars P, Samei E, and Duong L
- Subjects
- Humans, Child, X-Rays, Motion, Heart diagnostic imaging, Angiography
- Abstract
Objective. To develop a novel patient-specific cardio-respiratory motion prediction approach for X-ray angiography time series based on a simple long short-term memory (LSTM) model. Approach. The cardio-respiratory motion behavior in an X-ray image sequence was represented as a sequence of 2D affine transformation matrices, which provide the displacement information of contrasted moving objects (arteries and medical devices) in a sequence. The displacement information includes translation, rotation, shearing, and scaling in 2D. A many-to-many LSTM model was developed to predict 2D transformation parameters in matrix form for future frames based on previously generated images. The method was developed with 64 simulated phantom datasets (pediatric and adult patients) using a realistic cardio-respiratory motion simulator (XCAT) and was validated using 10 different patient X-ray angiography sequences. Main results. Using this method we achieved less than 1 mm prediction error for complex cardio-respiratory motion prediction. The following mean prediction error values were recorded over all the simulated sequences: 0.39 mm (for both motions), 0.33 mm (for only cardiac motion), and 0.47 mm (for only respiratory motion). The mean prediction error for the patient dataset was 0.58 mm. Significance. This study paves the road for a patient-specific cardio-respiratory motion prediction model, which might improve navigation guidance during cardiac interventions., (Creative Commons Attribution license.)
- Published
- 2023
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5. A scanner-specific framework for simulating CT images with tube current modulation.
- Author
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Jadick G, Abadi E, Harrawood B, Sharma S, Segars WP, and Samei E
- Subjects
- Computer Simulation, Humans, Phantoms, Imaging, Radiation Dosage, X-Rays, Tomography, X-Ray Computed
- Abstract
Although tube current modulation (TCM) is routinely implemented in modern computed tomography (CT) scans, no existing CT simulator is capable of generating realistic images with TCM. The goal of this study was to develop such a framework to (1) facilitate patient-specific optimization of TCM parameters and (2) enable future virtual imaging trials (VITs) with more clinically realistic image quality and x-ray flux distributions. The framework was created by developing a TCM module and integrating it with an existing CT simulator (DukeSim). The developed module utilizes scanner-calibrated TCM parameters and two localizer radiographs to compute the mAs for each simulated CT projection. This simulation pipeline was validated in two parts. First, DukeSim was validated in the context of a commercial scanner with TCM (SOMATOM Force, Siemens Healthineers) by imaging a physical CT phantom (Mercury, Sun Nuclear) and its computational analogue. Second, the TCM module was validated by imaging a computational anthropomorphic phantom (ATOM, CIRS) using DukeSim with real and module-generated TCM profiles. The validation demonstrated DukeSim's realism in terms of noise magnitude, noise texture, spatial resolution, and image contrast (with average differences of 0.38%, 6.31%, 0.43%, and -9 HU, respectively). It also demonstrated the TCM module's realism in terms of projection-level mAs and resulting noise magnitude (2.86% and -2.60%, respectively). Finally, the framework was applied to a pilot VIT simulating images of three computational anthropomorphic phantoms (XCAT, with body mass indices (BMIs) of 24.3, 28.2, and 33.0) under five different TCM settings. The optimal TCM for each phantom was characterized based on various criteria, such as minimizing mAs or maximizing image quality. 'Very Weak' TCM minimized noise for the 24.3 BMI phantom, while 'Very Strong' TCM minimized noise for the 33.0 BMI phantom. This illustrates the utility of the developed framework for future optimization studies of TCM parameters and, more broadly, large-scale VITs with scanner-specific TCM., (© 2021 Institute of Physics and Engineering in Medicine.)
- Published
- 2021
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6. A GPU-accelerated framework for rapid estimation of scanner-specific scatter in CT for virtual imaging trials.
- Author
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Sharma S, Abadi E, Kapadia A, Segars WP, and Samei E
- Subjects
- Computer Simulation, Humans, Monte Carlo Method, Phantoms, Imaging, Scattering, Radiation, Cone-Beam Computed Tomography
- Abstract
Virtual imaging trials (VITs), defined as the process of conducting clinical imaging trials using computer simulations, offer a time- and cost-effective alternative to traditional imaging trials for CT. The clinical potential of VITs hinges on the realism of simulations modeling the image acquisition process, where the accurate scanner-specific simulation of scatter in a time-feasible manner poses a particular challenge. To meet this need, this study proposes, develops, and validates a rapid scatter estimation framework, based on GPU-accelerated Monte Carlo (MC) simulations and denoising methods, for estimating scatter in single source, dual-source, and photon-counting CT. A CT simulator was developed to incorporate parametric models for an anti-scatter grid and a curved energy integrating detector with an energy-dependent response. The scatter estimates from the simulator were validated using physical measurements acquired on a clinical CT system using the standard single-blocker method. The MC simulator was further extended to incorporate a pre-validated model for a PCD and an additional source-detector pair to model cross scatter in dual-source configurations. To estimate scatter with desirable levels of statistical noise using a manageable computational load, two denoising methods using a (1) convolutional neural network and an (2) optimized Gaussian filter were further deployed. The viability of this framework for clinical VITs was assessed by integrating it with a scanner-specific ray-tracer program to simulate images for an image quality (Mercury) and an anthropomorphic phantom (XCAT). The simulated scatter-to-primary ratios agreed with physical measurements within 4.4% ± 10.8% across all projection angles and kVs. The differences of ∼121 HU between images with and without scatter, signifying the importance of scatter for simulating clinical images. The denoising methods preserved the magnitudes and trends observed in the reference scatter distributions, with an averaged rRMSE value of 0.91 and 0.97 for the two methods, respectively. The execution time of ∼30 s for simulating scatter in a single projection with a desirable level of statistical noise indicates a major improvement in performance, making our tool an eligible candidate for conducting extensive VITs spanning multiple patients and scan protocols., (© 2021 Institute of Physics and Engineering in Medicine.)
- Published
- 2021
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7. A real-time Monte Carlo tool for individualized dose estimations in clinical CT.
- Author
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Sharma S, Kapadia A, Fu W, Abadi E, Segars WP, and Samei E
- Subjects
- Adult, Child, Humans, Male, Phantoms, Imaging, Radiation Exposure, Time Factors, Monte Carlo Method, Radiation Dosage, Radiometry methods, Tomography, X-Ray Computed
- Abstract
The increasing awareness of the adverse effects associated with radiation exposure in computed tomography (CT) has necessesitated the quantification of dose delivered to patients for better risk assessment in the clinic. The current methods for dose quantification used in the clinic are approximations, lacking realistic models for the irradiation conditions utilized in the scan and the anatomy of the patient being imaged, which limits their relevance for a particular patient. The established gold-standard technique for individualized dose quantification uses Monte Carlo (MC) simulations to obtain patient-specific estimates of organ dose in anatomically realistic computational phantoms to provide patient-specific estimates of organ dose. Although accurate, MC simulations are computationally expensive, which limits their utility for time-constrained applications in the clinic. To overcome these shortcomings, a real-time GPU-based MC tool based on FDA's MC-GPU framework was developed for patient and scanner-specific dosimetry in the clinic. The tool was validated against (1) AAPM's TG-195 reference datasets and (2) physical measurements of dose acquired using TLD chips in adult and pediatric anthropomorphic phantoms. To demonstrate its utility towards providing individualized dose estimates, it was integrated with an automatic segmentation method for generating patient-specific models, which were then used to estimate patient- and scanner-specific organ doses for a select population of 50 adult patients using a clinically relevant CT protocol. The organ dose estimates were compared to corresponding dose estimates from a previously validated MC method based on Penelope. The dose estimates from our MC tool agreed within 5% for all organs (except thyroid) tabulated by TG-195 and within 10% for all TLD locations in the adult and pediactric phantoms, across all validation cases. Compared against Penelope, the organ dose estimates agreed within 3% on average for all organs in the patient population study. The average run duration for each patient was estimated at 23.79 s, representing a significant speedup (~700×) over existing non-parallelized MC methods. The accuracy of dose estimates combined with a significant improvement in execution times suggests a feasible solution utilizing the proposed MC tool for real-time individualized dosimetry in the clinic.
- Published
- 2019
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8. Techniques for virtual lung nodule insertion: volumetric and morphometric comparison of projection-based and image-based methods for quantitative CT.
- Author
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Robins M, Solomon J, Sahbaee P, Sedlmair M, Roy Choudhury K, Pezeshk A, Sahiner B, and Samei E
- Subjects
- Humans, Linear Models, Lung Neoplasms diagnostic imaging, Phantoms, Imaging, Radiographic Image Interpretation, Computer-Assisted methods, Solitary Pulmonary Nodule diagnostic imaging, Tomography Scanners, X-Ray Computed, Tomography, X-Ray Computed methods
- Abstract
Virtual nodule insertion paves the way towards the development of standardized databases of hybrid CT images with known lesions. The purpose of this study was to assess three methods (an established and two newly developed techniques) for inserting virtual lung nodules into CT images. Assessment was done by comparing virtual nodule volume and shape to the CT-derived volume and shape of synthetic nodules. 24 synthetic nodules (three sizes, four morphologies, two repeats) were physically inserted into the lung cavity of an anthropomorphic chest phantom (KYOTO KAGAKU). The phantom was imaged with and without nodules on a commercial CT scanner (SOMATOM Definition Flash, Siemens) using a standard thoracic CT protocol at two dose levels (1.4 and 22 mGy CTDI
vol ). Raw projection data were saved and reconstructed with filtered back-projection and sinogram affirmed iterative reconstruction (SAFIRE, strength 5) at 0.6 mm slice thickness. Corresponding 3D idealized, virtual nodule models were co-registered with the CT images to determine each nodule's location and orientation. Virtual nodules were voxelized, partial volume corrected, and inserted into nodule-free CT data (accounting for system imaging physics) using two methods: projection-based Technique A, and image-based Technique B. Also a third Technique C based on cropping a region of interest from the acquired image of the real nodule and blending it into the nodule-free image was tested. Nodule volumes were measured using a commercial segmentation tool (iNtuition, TeraRecon, Inc.) and deformation was assessed using the Hausdorff distance. Nodule volumes and deformations were compared between the idealized, CT-derived and virtual nodules using a linear mixed effects regression model which utilized the mean, standard deviation, and coefficient of variation ([Formula: see text], [Formula: see text] and [Formula: see text] of the regional Hausdorff distance. Overall, there was a close concordance between the volumes of the CT-derived and virtual nodules. Percent differences between them were less than 3% for all insertion techniques and were not statistically significant in most cases. Correlation coefficient values were greater than 0.97. The deformation according to the Hausdorff distance was also similar between the CT-derived and virtual nodules with minimal statistical significance in the ([Formula: see text]) for Techniques A, B, and C. This study shows that both projection-based and image-based nodule insertion techniques yield realistic nodule renderings with statistical similarity to the synthetic nodules with respect to nodule volume and deformation. These techniques could be used to create a database of hybrid CT images containing nodules of known size, location and morphology.- Published
- 2017
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9. Convolution-based estimation of organ dose in tube current modulated CT.
- Author
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Tian X, Segars WP, Dixon RL, and Samei E
- Subjects
- Adolescent, Adult, Aged, Body Size, Female, Humans, Male, Middle Aged, Phantoms, Imaging, Radiation Monitoring standards, Radiotherapy Planning, Computer-Assisted methods, Tomography, X-Ray Computed standards, Body Weight, Radiation Dosage, Radiation Monitoring methods, Tomography, X-Ray Computed methods
- Abstract
Estimating organ dose for clinical patients requires accurate modeling of the patient anatomy and the dose field of the CT exam. The modeling of patient anatomy can be achieved using a library of representative computational phantoms (Samei et al 2014 Pediatr. Radiol. 44 460-7). The modeling of the dose field can be challenging for CT exams performed with a tube current modulation (TCM) technique. The purpose of this work was to effectively model the dose field for TCM exams using a convolution-based method. A framework was further proposed for prospective and retrospective organ dose estimation in clinical practice. The study included 60 adult patients (age range: 18-70 years, weight range: 60-180 kg). Patient-specific computational phantoms were generated based on patient CT image datasets. A previously validated Monte Carlo simulation program was used to model a clinical CT scanner (SOMATOM Definition Flash, Siemens Healthcare, Forchheim, Germany). A practical strategy was developed to achieve real-time organ dose estimation for a given clinical patient. CTDIvol-normalized organ dose coefficients ([Formula: see text]) under constant tube current were estimated and modeled as a function of patient size. Each clinical patient in the library was optimally matched to another computational phantom to obtain a representation of organ location/distribution. The patient organ distribution was convolved with a dose distribution profile to generate [Formula: see text] values that quantified the regional dose field for each organ. The organ dose was estimated by multiplying [Formula: see text] with the organ dose coefficients ([Formula: see text]). To validate the accuracy of this dose estimation technique, the organ dose of the original clinical patient was estimated using Monte Carlo program with TCM profiles explicitly modeled. The discrepancy between the estimated organ dose and dose simulated using TCM Monte Carlo program was quantified. We further compared the convolution-based organ dose estimation method with two other strategies with different approaches of quantifying the irradiation field. The proposed convolution-based estimation method showed good accuracy with the organ dose simulated using the TCM Monte Carlo simulation. The average percentage error (normalized by CTDIvol) was generally within 10% across all organs and modulation profiles, except for organs located in the pelvic and shoulder regions. This study developed an improved method that accurately quantifies the irradiation field under TCM scans. The results suggested that organ dose could be estimated in real-time both prospectively (with the localizer information only) and retrospectively (with acquired CT data).
- Published
- 2016
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10. Volumetric x-ray coherent scatter imaging of cancer in resected breast tissue: a Monte Carlo study using virtual anthropomorphic phantoms.
- Author
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Lakshmanan MN, Harrawood BP, Samei E, and Kapadia AJ
- Subjects
- Breast Neoplasms surgery, Female, Humans, Monte Carlo Method, Phantoms, Imaging, Breast Neoplasms diagnostic imaging, Models, Theoretical, Tomography, X-Ray Computed
- Abstract
Breast cancer patients undergoing surgery often choose to have a breast conserving surgery (BCS) instead of mastectomy for removal of only the breast tumor. If post-surgical analysis such as histological assessment of the resected tumor reveals insufficient healthy tissue margins around the cancerous tumor, the patient must undergo another surgery to remove the missed tumor tissue. Such re-excisions are reported to occur in 20%-70% of BCS patients. A real-time surgical margin assessment technique that is fast and consistently accurate could greatly reduce the number of re-excisions performed in BCS. We describe here a tumor margin assessment method based on x-ray coherent scatter computed tomography (CSCT) imaging and demonstrate its utility in surgical margin assessment using Monte Carlo simulations. A CSCT system was simulated in GEANT4 and used to simulate two virtual anthropomorphic CSCT scans of phantoms resembling surgically resected tissue. The resulting images were volume-rendered and found to distinguish cancerous tumors embedded in complex distributions of adipose and fibroglandular breast tissue (as is expected in the breast). The images exhibited sufficient spatial and spectral (i.e. momentum transfer) resolution to classify the tissue in any given voxel as healthy or cancerous. ROC analysis of the classification accuracy revealed an area under the curve of up to 0.97. These results indicate that coherent scatter imaging is promising as a possible fast and accurate surgical margin assessment technique.
- Published
- 2015
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11. A generic framework to simulate realistic lung, liver and renal pathologies in CT imaging.
- Author
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Solomon J and Samei E
- Subjects
- Humans, Kidney Calculi diagnostic imaging, Liver Neoplasms diagnostic imaging, Multiple Pulmonary Nodules diagnostic imaging, ROC Curve, Computer Simulation, Image Processing, Computer-Assisted methods, Kidney Calculi pathology, Liver Neoplasms pathology, Multiple Pulmonary Nodules pathology, Observer Variation, Tomography, X-Ray Computed methods
- Abstract
Realistic three-dimensional (3D) mathematical models of subtle lesions are essential for many computed tomography (CT) studies focused on performance evaluation and optimization. In this paper, we develop a generic mathematical framework that describes the 3D size, shape, contrast, and contrast-profile characteristics of a lesion, as well as a method to create lesion models based on CT data of real lesions. Further, we implemented a technique to insert the lesion models into CT images in order to create hybrid CT datasets. This framework was used to create a library of realistic lesion models and corresponding hybrid CT images. The goodness of fit of the models was assessed using the coefficient of determination (R(2)) and the visual appearance of the hybrid images was assessed with an observer study using images of both real and simulated lesions and receiver operator characteristic (ROC) analysis. The average R(2) of the lesion models was 0.80, implying that the models provide a good fit to real lesion data. The area under the ROC curve was 0.55, implying that the observers could not readily distinguish between real and simulated lesions. Therefore, we conclude that the lesion-modeling framework presented in this paper can be used to create realistic lesion models and hybrid CT images. These models could be instrumental in performance evaluation and optimization of novel CT systems.
- Published
- 2014
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12. The impact on CT dose of the variability in tube current modulation technology: a theoretical investigation.
- Author
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Li X, Segars WP, and Samei E
- Subjects
- Adult, Female, Humans, Radiography, Abdominal, Radiography, Thoracic, Phantoms, Imaging, Radiation Dosage, Tomography, X-Ray Computed instrumentation
- Abstract
Body CT scans are routinely performed using tube-current-modulation (TCM) technology. There is notable variability across CT manufacturers in terms of how TCM technology is implemented. Some manufacturers aim to provide uniform image noise across body regions and patient sizes, whereas others aim to provide lower noise for smaller patients. The purpose of this study was to conduct a theoretical investigation to understand how manufacturer-dependent TCM scheme affects organ dose, and to develop a generic approach for assessing organ dose across TCM schemes. The adult reference female extended cardiac-torso (XCAT) phantom was used for this study. A ray-tracing method was developed to calculate the attenuation of the phantom for a given projection angle based on phantom anatomy, CT system geometry, x-ray energy spectrum, and bowtie filter filtration. The tube current (mA) for a given projection angle was then calculated as a log-linear function of the attenuation along that projection. The slope of this function, termed modulation control strength, α, was varied from 0 to 1 to emulate the variability in TCM technology. Using a validated Monte Carlo program, organ dose was simulated for five α values (α = 0, 0.25, 0.5, 0.75, and 1) in the absence and presence of a realistic system mA limit. Organ dose was further normalized by volume-weighted CT dose index (CTDIvol) to obtain conversion factors (h factors) that are relatively independent of system specifics and scan parameters. For both chest and abdomen-pelvis scans and for 24 radiosensitive organs, organ dose conversion factors varied with α, following second-order polynomial equations. This result suggested the need for α-specific organ dose conversion factors (i.e., conversion factors specific to the modulation scheme used). On the other hand, across the full range of α values, organ dose in a TCM scan could be derived from the conversion factors established for a fixed-mA scan (hFIXED). This was possible by multiplying hFIXED by a revised definition of CTDIvol that accounts for two factors: (a) the tube currents at the location of an organ and (b) the variation in organ volume along the longitudinal direction. This α-generic approach represents an approximation. The error associated with this approximation was evaluated using the α-specific organ dose (i.e., the organ dose obtained by using α-specific mA profiles as inputs into the Monte Carlo simulation) as the reference standard. When the mA profiles were constrained by a realistic system limit, this α-generic approach had errors of less than ~20% for the full range of α values. This was the case for 24 radiosensitive organs in both chest and abdomen-pelvis CT scans with the exception of thyroid in the chest scan and bladder in the abdomen-pelvis scan. For these two organs, the errors were less than ~40%. The results of this theoretical study suggested that knowing the mA modulation profile and the fixed-mA conversion factors, organ dose may be estimated for a TCM scan independent of the specific modulation scheme applied.
- Published
- 2014
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13. A fast poly-energetic iterative FBP algorithm.
- Author
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Lin Y and Samei E
- Subjects
- Artifacts, Phantoms, Imaging, Radiography, Thoracic, Reproducibility of Results, Time Factors, Tomography, X-Ray Computed, Algorithms, Image Processing, Computer-Assisted methods
- Abstract
The beam hardening (BH) effect can influence medical interpretations in two notable ways. First, high attenuation materials, such as bones, can induce strong artifacts, which severely deteriorate the image quality. Second, voxel values can significantly deviate from the real values, which can lead to unreliable quantitative evaluation results. Some iterative methods have been proposed to eliminate the BH effect, but they cannot be widely applied for clinical practice because of the slow computational speed. The purpose of this study was to develop a new fast and practical poly-energetic iterative filtered backward projection algorithm (piFBP). The piFBP is composed of a novel poly-energetic forward projection process and a robust FBP-type backward updating process. In the forward projection process, an adaptive base material decomposition method is presented, based on which diverse body tissues (e.g., lung, fat, breast, soft tissue, and bone) and metal implants can be incorporated to accurately evaluate poly-energetic forward projections. In the backward updating process, one robust and fast FBP-type backward updating equation with a smoothing kernel is introduced to avoid the noise accumulation in the iteration process and to improve the convergence properties. Two phantoms were designed to quantitatively validate our piFBP algorithm in terms of the beam hardening index (BIdx) and the noise index (NIdx). The simulation results showed that piFBP possessed fast convergence speed, as the images could be reconstructed within four iterations. The variation range of the BIdx's of various tissues across phantom size and spectrum were reduced from [-7.5, 17.5] for FBP to [-0.1, 0.1] for piFBP while the NIdx's were maintained in the same low level (about [0.3, 1.7]). When a metal implant presented in a complex phantom, piFBP still had excellent reconstruction performance, as the variation range of the BIdx's of body tissues were reduced from [-2.9, 15.9] for FBP to [-0.3, 0.3] for piFBP and the magnitude of the BIdx of the metal implant was reduced from 23.3 to 1.3. The proposed algorithm piFBP can effectively eliminate beam hardening artifacts caused by bones, greatly reduce metal artifacts caused by metal implants, and quantitatively reconstruct accurate images with poly-energetic spectrum. Its fast reconstruction speed and excellent performance make it ready for clinical applications on the current single spectrum CT scanners.
- Published
- 2014
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14. Dose coefficients in pediatric and adult abdominopelvic CT based on 100 patient models.
- Author
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Tian X, Li X, Segars WP, Frush DP, Paulson EK, and Samei E
- Subjects
- Adolescent, Adult, Aged, Body Mass Index, Child, Child, Preschool, Feasibility Studies, Female, Humans, Infant, Infant, Newborn, Male, Middle Aged, Young Adult, Abdomen anatomy & histology, Models, Anatomic, Pelvis anatomy & histology, Pelvis diagnostic imaging, Radiation Dosage, Radiography, Abdominal, Tomography, X-Ray Computed
- Abstract
Recent studies have shown the feasibility of estimating patient dose from a CT exam using CTDI(vol)-normalized-organ dose (denoted as h), DLP-normalized-effective dose (denoted as k), and DLP-normalized-risk index (denoted as q). However, previous studies were limited to a small number of phantom models. The purpose of this work was to provide dose coefficients (h, k, and q) across a large number of computational models covering a broad range of patient anatomy, age, size percentile, and gender. The study consisted of 100 patient computer models (age range, 0 to 78 y.o.; weight range, 2-180 kg) including 42 pediatric models (age range, 0 to 16 y.o.; weight range, 2-80 kg) and 58 adult models (age range, 18 to 78 y.o.; weight range, 57-180 kg). Multi-detector array CT scanners from two commercial manufacturers (LightSpeed VCT, GE Healthcare; SOMATOM Definition Flash, Siemens Healthcare) were included. A previously-validated Monte Carlo program was used to simulate organ dose for each patient model and each scanner, from which h, k, and q were derived. The relationships between h, k, and q and patient characteristics (size, age, and gender) were ascertained. The differences in conversion coefficients across the scanners were further characterized. CTDI(vol)-normalized-organ dose (h) showed an exponential decrease with increasing patient size. For organs within the image coverage, the average differences of h across scanners were less than 15%. That value increased to 29% for organs on the periphery or outside the image coverage, and to 8% for distributed organs, respectively. The DLP-normalized-effective dose (k) decreased exponentially with increasing patient size. For a given gender, the DLP-normalized-risk index (q) showed an exponential decrease with both increasing patient size and patient age. The average differences in k and q across scanners were 8% and 10%, respectively. This study demonstrated that the knowledge of patient information and CTDIvol/DLP values may be used to estimate organ dose, effective dose, and risk index in abdominopelvic CT based on the coefficients derived from a large population of pediatric and adult patients.
- Published
- 2013
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15. Quantitative CT: technique dependence of volume estimation on pulmonary nodules.
- Author
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Chen B, Barnhart H, Richard S, Colsher J, Amurao M, and Samei E
- Subjects
- Anthropometry, Equipment Design, Humans, Imaging, Three-Dimensional, Lung diagnostic imaging, Lung Neoplasms diagnosis, Lung Neoplasms diagnostic imaging, Models, Statistical, Phantoms, Imaging, Polypropylenes chemistry, Reproducibility of Results, Software, Solitary Pulmonary Nodule diagnosis, Thorax pathology, Solitary Pulmonary Nodule diagnostic imaging, Tomography, X-Ray Computed methods
- Abstract
Current estimation of lung nodule size typically relies on uni- or bi-dimensional techniques. While new three-dimensional volume estimation techniques using MDCT have improved size estimation of nodules with irregular shapes, the effect of acquisition and reconstruction parameters on accuracy (bias) and precision (variance) of the new techniques has not been fully investigated. To characterize the volume estimation performance dependence on these parameters, an anthropomorphic chest phantom containing synthetic nodules was scanned and reconstructed with protocols across various acquisition and reconstruction parameters. Nodule volumes were estimated by a clinical lung analysis software package, LungVCAR. Precision and accuracy of the volume assessment were calculated across the nodules and compared between protocols via a generalized estimating equation analysis. Results showed that the precision and accuracy of nodule volume quantifications were dependent on slice thickness, with different dependences for different nodule characteristics. Other parameters including kVp, pitch, and reconstruction kernel had lower impact. Determining these technique dependences enables better volume quantification via protocol optimization and highlights the importance of consistent imaging parameters in sequential examinations.
- Published
- 2012
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16. Dual-energy contrast-enhanced breast tomosynthesis: optimization of beam quality for dose and image quality.
- Author
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Samei E and Saunders RS
- Subjects
- Computer Simulation, Female, Humans, Image Processing, Computer-Assisted standards, Models, Biological, Monte Carlo Method, Phantoms, Imaging, Photons, Quality Control, Radiography, Dual-Energy Scanned Projection standards, Breast pathology, Breast Neoplasms pathology, Contrast Media, Image Processing, Computer-Assisted methods, Radiography, Dual-Energy Scanned Projection methods
- Abstract
Dual-energy contrast-enhanced breast tomosynthesis is a promising technique to obtain three-dimensional functional information from the breast with high resolution and speed. To optimize this new method, this study searched for the beam quality that maximized image quality in terms of mass detection performance. A digital tomosynthesis system was modeled using a fast ray-tracing algorithm, which created simulated projection images by tracking photons through a voxelized anatomical breast phantom containing iodinated lesions. The single-energy images were combined into dual-energy images through a weighted log subtraction process. The weighting factor was optimized to minimize anatomical noise, while the dose distribution was chosen to minimize quantum noise. The dual-energy images were analyzed for the signal difference to noise ratio (SdNR) of iodinated masses. The fast ray-tracing explored 523 776 dual-energy combinations to identify which yields optimum mass SdNR. The ray-tracing results were verified using a Monte Carlo model for a breast tomosynthesis system with a selenium-based flat-panel detector. The projection images from our voxelized breast phantom were obtained at a constant total glandular dose. The projections were combined using weighted log subtraction and reconstructed using commercial reconstruction software. The lesion SdNR was measured in the central reconstructed slice. The SdNR performance varied markedly across the kVp and filtration space. Ray-tracing results indicated that the mass SdNR was maximized with a high-energy tungsten beam at 49 kVp with 92.5 µm of copper filtration and a low-energy tungsten beam at 49 kVp with 95 µm of tin filtration. This result was consistent with Monte Carlo findings. This mammographic technique led to a mass SdNR of 0.92 ± 0.03 in the projections and 3.68 ± 0.19 in the reconstructed slices. These values were markedly higher than those for non-optimized techniques. Our findings indicate that dual-energy breast tomosynthesis can be performed optimally at 49 kVp with alternative copper and tin filters, with reconstruction following weighted subtraction. The optimum technique provides best visibility of iodine against structured breast background in dual-energy contrast-enhanced breast tomosynthesis.
- Published
- 2011
- Full Text
- View/download PDF
17. Effective dose efficiency: an application-specific metric of quality and dose for digital radiography.
- Author
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Samei E, Ranger NT, Dobbins JT, and Ravin CE
- Subjects
- Adult, Humans, Infant, Male, Phantoms, Imaging, Quality Control, Radiography, Thoracic, Radiation Dosage, Radiographic Image Enhancement methods, Radiographic Image Enhancement standards
- Abstract
The detective quantum efficiency (DQE) and the effective DQE (eDQE) are relevant metrics of image quality for digital radiography detectors and systems, respectively. The current study further extends the eDQE methodology to technique optimization using a new metric of the effective dose efficiency (eDE), reflecting both the image quality as well as the effective dose (ED) attributes of the imaging system. Using phantoms representing pediatric, adult and large adult body habitus, image quality measurements were made at 80, 100, 120 and 140 kVp using the standard eDQE protocol and exposures. ED was computed using Monte Carlo methods. The eDE was then computed as a ratio of image quality to ED for each of the phantom/spectral conditions. The eDQE and eDE results showed the same trends across tube potential with 80 kVp yielding the highest values and 120 kVp yielding the lowest. The eDE results for the pediatric phantom were markedly lower than the results for the adult phantom at spatial frequencies lower than 1.2-1.7 mm(-1), primarily due to a correspondingly higher value of ED per entrance exposure. The relative performance for the adult and large adult phantoms was generally comparable but affected by kVps. The eDE results for the large adult configuration were lower than the eDE results for the adult phantom, across all spatial frequencies (120 and 140 kVp) and at spatial frequencies greater than 1.0 mm(-1) (80 and 100 kVp). Demonstrated for chest radiography, the eDE shows promise as an application-specific metric of imaging performance, reflective of body habitus and radiographic technique, with utility for radiography protocol assessment and optimization.
- Published
- 2011
- Full Text
- View/download PDF
18. Comparison of edge analysis techniques for the determination of the MTF of digital radiographic systems.
- Author
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Samei E, Buhr E, Granfors P, Vandenbroucke D, and Wang X
- Subjects
- Equipment Failure Analysis instrumentation, Pattern Recognition, Automated standards, Phantoms, Imaging, Quality Assurance, Health Care standards, Radiographic Image Enhancement standards, Radiographic Image Interpretation, Computer-Assisted instrumentation, Radiographic Image Interpretation, Computer-Assisted standards, Reproducibility of Results, Sensitivity and Specificity, Algorithms, Equipment Failure Analysis methods, Pattern Recognition, Automated methods, Quality Assurance, Health Care methods, Radiographic Image Enhancement instrumentation, Radiographic Image Enhancement methods, Radiographic Image Interpretation, Computer-Assisted methods
- Abstract
The modulation transfer function (MTF) is well established as a metric to characterize the resolution performance of a digital radiographic system. Implemented by various laboratories, the edge technique is currently the most widespread approach to measure the MTF. However, there can be differences in the results attributed to differences in the analysis technique employed. The objective of this study was to determine whether comparable results can be obtained from different algorithms processing identical images representative of those of current digital radiographic systems. Five laboratories participated in a round-robin evaluation of six different algorithms including one prescribed in the International Electrotechnical Commission (IEC) 62220-1 standard. The algorithms were applied to two synthetic and 12 real edge images from different digital radiographic systems including CR, and direct- and indirect-conversion detector systems. The results were analysed in terms of variability as well as accuracy of the resulting presampled MTFs. The results indicated that differences between the individual MTFs and the mean MTF were largely below 0.02. In the case of the two simulated edge images, all algorithms yielded similar results within 0.01 of the expected true MTF. The findings indicated that all algorithms tested in this round-robin evaluation, including the IEC-prescribed algorithm, were suitable for accurate MTF determination from edge images, provided the images are not excessively noisy. The agreement of the MTF results was judged sufficient for the measurement of the MTF necessary for the determination of the DQE.
- Published
- 2005
- Full Text
- View/download PDF
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