5 results on '"Erika Silva"'
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2. Effect of gamma irradiation doses in the structural and functional properties of mice splenic cells
- Author
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Alexel Burgara-Estrella, Jose Andre-i Sarabia-Sainz, Aracely Angulo-Molina, Martín Pedroza-Montero, Erika Silva-Campa, Mónica Acosta-Elías, Yanik Deana, Maricela Montalvo-Corral, and Iracema del C. Rodríguez-Hernández
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Male ,γ irradiation ,030218 nuclear medicine & medical imaging ,Ionizing radiation ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Phagocytosis ,medicine ,Animals ,Humans ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Radiological and Ultrasound Technology ,Chemistry ,Cancer ,Dose-Response Relationship, Radiation ,medicine.disease ,Interleukin-10 ,Gene Expression Regulation ,Gamma Rays ,030220 oncology & carcinogenesis ,Cancer research ,Interleukin-2 ,Spleen ,HeLa Cells ,Gamma irradiation - Abstract
Ionizing radiation is nowadays effectively used in cancer treatments. However, the effect of irradiation in immune-system cells is poorly understood and remains controversial. The aim of this work was to determine the effect of γ-irradiation in the structural and functional properties of mice splenic cells.Structural traits of irradiated splenic cells were evaluated by Atomic Force Microscopy and Raman spectroscopy. Functional properties were measured by gene and protein expression by RT-qPCR and ELISA, respectively. The induced cytotoxic effect was evaluated by MTT assay and the phagocytic capability by flow cytometry.Membrane roughness and molecular composition of splenic adherent cells are not changed by irradiation doses exposure. An increase in transcription of pro-inflammatory cytokines was observed. While protein expression decreased in IL-2 dose-dependent, relevant differences were identified in the anti-inflammatory marker IL-10 at 27 Gy. An increase of cytotoxicity in irradiated cells at 7 Gy and 27 Gy doses was observed, while phagocytosis was slight increased at 7 Gy dose but not statistically significant.We have demonstrated that γ-irradiation affects the splenic cells and changes the cytokines profile toward a pro-inflammatory phenotype and a tendency to increase the cytotoxicity was found, which implies a stimulation of immune response induced by γ-irradiation.
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- 2019
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3. Nano alterations of membrane structure on both γ-irradiated and stored human erythrocytes
- Author
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Ana Irene Ledesma-Osuna, Rodrigo Meléndrez-Amavizca, Mónica Acosta-Elías, Aracely Angulo-Molina, Alexel Burgara-Estrella, Diego Soto-Puebla, Erika Silva-Campa, J. Andre-i Sarabia-Sainz, Martín Pedroza-Montero, Karla Santacruz-Gómez, and B. Castañeda
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Adult ,02 engineering and technology ,Blood irradiation therapy ,Ionizing radiation ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Nanotechnology ,Radiology, Nuclear Medicine and imaging ,Irradiation ,Whole blood ,Radiological and Ultrasound Technology ,Chemistry ,Erythrocyte Membrane ,Membrane structure ,Erythrocyte fragility ,hemic and immune systems ,021001 nanoscience & nanotechnology ,Osmotic Fragility ,Membrane ,Biochemistry ,Gamma Rays ,030220 oncology & carcinogenesis ,Biophysics ,Hemoglobin ,0210 nano-technology - Abstract
Storage and ionizing radiation of human red blood cells (RBC) produce alterations on RBC membranes and modify their normal shape and functionality. We investigated early morphological and biochemical changes in RBC due to those stressing agents at the nanoscale level and their impact on blood quality.Whole blood samples from healthy donors were γ-irradiated with 15, 25, 35, and 50 Gy. Non-irradiated and non-stored RBC were used as control samples. Irradiated blood samples were stored separately at 4 °C and analyzed immediately and after 5 and 13 d. Atomic force microscopy (AFM), osmotic fragility and Raman spectroscopy were used to detect morphological and biochemical changes.RBC function is challenged by both irradiation and storage. The storage procedure caused nanometric variations over the surface of RBC membrane for both irradiated and non-irradiated cells. The membrane of RBC became more fragile, while the biochemical fingerprint of hemoglobin (Hb) remained unaltered.Our work shows that the irradiation procedure leads to an increase in the number and size of nanovesicles along with the dose. The functionality of RBC can be affected from changes in the roughness, becoming more fragile and susceptible to breakage.
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- 2017
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4. Anatomical characterization of elephant grass under different defoliation frequencies and levels of insertion on the tiller
- Author
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Sanchês, Sâmara Stainy Cardoso, primary, Rodrigues, Rosane Cláudia, additional, de Araújo, Ricardo Alves, additional, Santos, Francisco Naysson de Sousa, additional, da Silva, Ivone Rodrigues, additional, Figueredo, Erika Silva, additional, Cabral, Luciano da Silva, additional, Araújo, Jocélio dos Santos, additional, and Santos Costa, Clésio dos, additional
- Published
- 2019
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5. Trypanosome Capping Enzymes Display a Novel Two-Domain Structure
- Author
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Erika Silva, Elisabetta Ullu, Christian Tschudi, and Ryuji Kobayashi
- Subjects
Guanylyltransferase ,Five-prime cap ,RNA capping ,Recombinant Fusion Proteins ,Molecular Sequence Data ,Trypanosoma brucei brucei ,Guanosine Monophosphate ,Gene Expression ,RNA-dependent RNA polymerase ,RNA polymerase II ,Crithidia fasciculata ,Mice ,Capping enzyme ,parasitic diseases ,RNA triphosphatase ,Animals ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Conserved Sequence ,Binding Sites ,Base Sequence ,Sequence Homology, Amino Acid ,biology ,RNA ,RNA Nucleotidyltransferases ,Cell Biology ,DNA, Protozoan ,Biochemistry ,biology.protein - Abstract
Capping of RNA molecules with m7G is an essential modification which plays several roles in RNA metabolism and processing. In the nucleus it directs pre-mRNAs to the processing pathway and mRNAs and U small nuclear RNAs (U snRNAs) to the export pathway. In the cytoplasm, it regulates both mRNA translation initiation and mRNA turnover. In most eukaryotic organisms m7G capping is restricted to nascent RNA polymerase II (PolII) transcripts, namely, pre- mRNAs and precursors to U snRNAs. In contrast, in trypanosomatid protozoa mRNA capping occurs by a fundamentally different mechanism. It is well established that the m7G cap of mature mRNA is acquired posttranscriptionally by an RNA processing reaction, namely, trans splicing. In this process, the capped spliced leader (SL) sequence is transferred from the SL RNA to the 5′ ends of all trypanosome mRNAs (14, 23, 36). Thus, trans splicing can also be considered a trans-capping reaction. The cap structure of the Trypanosoma brucei and Crithidia fasciculata SL RNA is quite elaborate in that the m7G moiety is linked via a 5′-5′ triphosphate bridge to four methylated nucleotides, resulting in an unusual cap 4 structure (2) which is essential for utilization of the SL RNA in trans splicing (18, 43). At present the identity of the RNA polymerase transcribing the SL RNA genes is not defined, because the standard classification based on transcription inhibitors gave conflicting results as to whether PolII or PolIII is the responsible polymerase (8, 25, 26, 42). In addition to the SL RNA, a subset of trypanosome PolIII transcripts, namely, the U2, U3, and U4 snRNAs, is also initially m7G capped (7, 22, 24, 39). Despite the uncertainty about the polymerase transcribing the SL RNA genes, the fact that some PolIII transcripts are capped suggests that the mechanism of transcript selection by the capping enzyme is different in trypanosomes from that in other eukaryotes. m7G capping is mediated by the stepwise action of three enzymatic activities (for a review, see reference 33). First, the γ-phosphate of a primary transcript is removed by RNA 5′-triphosphatase followed by GTP:RNA guanylyltransferase, or capping enzyme, which caps the RNA by the addition of GMP. Finally, the newly attached guanine residue is methylated at the N-7 position by the action of RNA (guanine-7-)methyltransferase. So far, only the reaction mechanism of guanylyltransferase has been examined in some detail. This enzyme catalyzes two sequential nucleotidyl transfer reactions, with a covalent enzyme-guanylate intermediate (19, 30). In this reaction, nucleophilic attack on the α-phosphate of GTP by guanylyltransferase results in the release of pyrophosphate and the formation of a covalent adduct in which GMP is linked to the guanylyltransferase through a phosphoamide bond to the ɛ-amino group of the catalytic lysine residue (30, 34, 38). To complete the reaction, GMP is transferred to the 5′ end of substrate RNA to yield an inverted 5′-5′ triphosphate bond. The vaccinia virus capping enzyme is a multifunctional protein that carries out all three steps of the capping reaction (21, 40, 44). The protein is organized as a heterodimer, with subunits of 95 and 33 kDa (4, 10, 16, 29, 32). The RNA 5′-triphosphatase and guanylyltransferase have been mapped to the amino-terminal 60-kDa domain of the large subunit, while full (guanine-7-)methyltransferase activity requires both subunits. The subunit structure of the vaccinia virus capping enzyme is only partially maintained in cellular counterparts. In particular, cellular capping enzymes are distinct from their viral counterparts in that there is so far no example of a physical association between the capping and methyltransferase functions. In Saccharomyces cerevisiae, the purified capping enzyme consists of two monofunctional polypeptides: a 52-kDa guanylyltransferase and an 80-kDa triphosphatase (12, 13, 28). The guanylyltransferase is the product of the CEG1 gene, which is essential for cell viability (28). As in higher eukaryotes, the yeast (guanine-7-)methyltransferase is purified as a separate entity and is encoded by the ABD1 gene (15). The monofunctional domain structure of the guanylyltransferase is also present in other fungi, such as Schizosaccharomyces pombe (31) and Candida albicans (49), and in Chlorella virus PBCV-1 (11). In higher eukaryotes, biochemical fractionation has shown that the guanylyltransferase from rat liver copurifies with an RNA triphosphatase activity but that the (guanine-7-)methyltransferase readily separates in early chromatography steps and purifies as an unassociated enzyme (48). Recent cloning of the Caenorhabditis elegans (37, 46) and mammalian (17, 50) capping enzymes showed that these enzymes consist of a single bifunctional polypeptide with two domains: a carboxy-terminal guanylyltransferase domain and an amino-terminal domain with RNA triphosphatase activity. Even though the guanylyltransferase domain is strictly conserved with respect to amino acids that are essential for in vivo function, the RNA triphosphatase domain does not resemble the vaccinia virus triphosphatase domain but rather has significant sequence and mechanistic similarities to the family of protein tyrosine phosphatases. Thus, it would appear from the above examples that unicellular and multicellular organisms differ with respect to the physical organization of enzymatic activities of the capping machinery; whereas unicellular organisms have a monofunctional guanylyltransferase, multicellular organisms have a bifunctional triphosphatase-guanylyltransferase. As a first step toward understanding the process of RNA capping in trypanosomes, we have purified the capping enzyme from C. fasciculata and cloned the corresponding genes from C. fasciculata and T. brucei. Comparison of the predicted amino acid sequences of the trypanosome proteins with those of the available eukaryotic and viral capping enzymes revealed several unique structural features. In particular, the trypanosome capping enzymes are remarkable in that they include a novel amino-terminal domain that displays no resemblance to any other domain associated with capping enzymes.
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- 1998
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