1. Minimizing Ethanol Carry-Over in Centrifugal Microfluidic Nucleic Acid Extraction by Advanced Bead Handling and Management of Diffusive Mass Transfer
- Author
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Jan Lueddecke, Sebastian Hin, Markus Rombach, Roland Zengerle, Konstantinos Mitsakakis, Mara Specht, and Nils Paust
- Subjects
Ethanol ,Chromatography ,Diffusion ,030231 tropical medicine ,010401 analytical chemistry ,Extraction (chemistry) ,Microfluidics ,Centrifugal microfluidics ,01 natural sciences ,0104 chemical sciences ,Bead (woodworking) ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,Mass transfer ,Nucleic acid - Abstract
We present three concepts for centrifugal microfluidics reducing ethanol carry-over in magnetic bead-based nucleic acid (NA) extraction. Ethanol carry-over is critical regarding inhibition of downstream NA amplification. We identified two possible carry-over pathways: Liquid co-transport within bead-clusters and vapor diffusion. For the first time, we integrated magnetic bead handling in centrifugal microfluidics at continuous rotation aiming to avoid liquid co-transport within bead-clusters. Consequently, no significant contribution to ethanol carry-over could be assigned anymore to liquid co-transport. Major carry-over was attributed to diffusive transport of ethanol vapor. Countermeasures reduced this from 9.7 % (v/v) to 0.4 % (v/v), below the critical level for inhibition of downstream amplification reactions. more...
- Published
- 2019
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