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4D cone-beam computed tomography (CBCT) is an important imaging modality in image-guided radiation therapy to address the motion-induced artifacts caused by organ movements during the respiratory process. However, due to the extremely sparse projection data for each temporal phase, 4D CBCT reconstructions will suffer from severe streaking artifacts. Therefore, to tackle the streak artifacts and provide high-quality images, we proposed a framework termed Prior-Regularized Iterative Optimization Reconstruction (PRIOR) for 4D CBCT. The PRIOR framework combines the physics-based model and data-driven method simultaneously, with powerful feature extracting capacity, significantly promoting the image quality compared to single model-based or deep learning-based methods. Besides, we designed a specialized deep learning model named PRIOR-Net, which can effectively excavate the static information in the prior image reconstructed from the fully-sampled projections at the encoding stage to improve the reconstruction performance for individual phase-resolved images. Both the simulated and clinical 4D CBCT datasets were performed to evaluate the performance of the PRIOR-Net and the PRIOR framework. Compared with the advanced 4D CBCT reconstruction methods, the proposed methods achieve promising results quantitatively and qualitatively in streak artifact suppression, soft tissue restoration, and tiny detail preservation. [ABSTRACT FROM AUTHOR]

The deep learning-based automatic recognition of the scanning or exposing region in medical imaging automation is a promising new technique, which can decrease the heavy workload of the radiographers, optimize imaging workflow and improve image quality. However, there is little related research and practice in X-ray imaging. In this paper, we focus on two key problems in X-ray imaging automation: automatic recognition of the exposure moment and the exposure region. Consequently, we propose an automatic video analysis framework based on the hybrid model, approaching real-time performance. The framework consists of three interdependent components: Body Structure Detection, Motion State Tracing, and Body Modeling. Body Structure Detection disassembles the patient to obtain the corresponding body keypoints and body Bboxes. Combining and analyzing the two different types of body structure representations is to obtain rich spatial location information about the patient body structure. Motion State Tracing focuses on the motion state analysis of the exposure region to recognize the appropriate exposure moment. The exposure region is calculated by Body Modeling when the exposure moment appears. A large-scale dataset for X-ray examination scene is built to validate the performance of the proposed method. Extensive experiments demonstrate the superiority of the proposed method in automatically recognizing the exposure moment and exposure region. This paradigm provides the first method that can enable automatically and accurately recognize the exposure region in X-ray imaging without the help of the radiographer. [ABSTRACT FROM AUTHOR]

Accurate and robust cephalometric image analysis plays an essential role in orthodontic diagnosis, treatment assessment and surgical planning. This paper proposes a novel landmark localization method for cephalometric analysis using multiscale image patch-based graph convolutional networks. In detail, image patches with the same size are hierarchically sampled from the Gaussian pyramid to well preserve multiscale context information. We combine local appearance and shape information into spatialized features with an attention module to enrich node representations in graph. The spatial relationships of landmarks are built with the incorporation of three-layer graph convolutional networks, and multiple landmarks are simultaneously updated and moved toward the targets in a cascaded coarse-to-fine process. Quantitative results obtained on publicly available cephalometric X-ray images have exhibited superior performance compared with other state-of-the-art methods in terms of mean radial error and successful detection rate within various precision ranges. Our approach performs significantly better especially in the clinically accepted range of 2 mm and this makes it suitable in cephalometric analysis and orthognathic surgery. [ABSTRACT FROM AUTHOR]

Accurate segmentation of uterus, uterine fibroids, and spine from MR images is crucial for high intensity focused ultrasound (HIFU) therapy but remains still difficult to achieve because of 1) the large shape and size variations among individuals, 2) the low contrast between adjacent organs and tissues, and 3) the unknown number of uterine fibroids. To tackle this problem, in this paper, we propose a large kernel Encoder-Decoder Network based on a 2D segmentation model. The use of this large kernel can capture multi-scale contexts by enlarging the valid receptive field. In addition, a deep multiple atrous convolution block is also employed to enlarge the receptive field and extract denser feature maps. Our approach is compared to both conventional and other deep learning methods and the experimental results conducted on a large dataset show its effectiveness. [ABSTRACT FROM AUTHOR]

The wide applications of X-ray computed tomography (CT) bring low-dose CT (LDCT) into a clinical prerequisite, but reducing the radiation exposure in CT often leads to significantly increased noise and artifacts, which might lower the judgment accuracy of radiologists. In this paper, we put forward a domain progressive 3D residual convolution network (DP-ResNet) for the LDCT imaging procedure that contains three stages: sinogram domain network (SD-net), filtered back projection (FBP), and image domain network (ID-net). Though both are based on the residual network structure, the SD-net and ID-net provide complementary effect on improving the final LDCT quality. The experimental results with both simulated and real projection data show that this domain progressive deep-learning network achieves significantly improved performance by combing the network processing in the two domains. [ABSTRACT FROM AUTHOR]

Noise detection accuracy is crucial in suppressing random-valued impulse noise. Both false and miss detections determine the final estimation performance. Deterministic detection methods, which distinctly classify pixels into noisy or uncorrupted pixels, tend to increase the estimation error because some uncorrupted edge points are hard to discriminate from the random-valued impulse noise points. This paper proposes an iterative structure-adaptive fuzzy estimation (SAFE) for random-valued impulse noise suppression. This SAFE method is developed in the framework of Gaussian maximum likelihood estimation. The structure-adaptive fuzziness is reflected by two structure-adaptive metrics based on pixel reliability and patch similarity, respectively. The reliability metric for each pixel (as noise free) is estimated via a novel-minimal-path-based structure propagation to give full consideration of the spatially varying image structures. A robust iteration stopping strategy is also proposed by evaluating the reestimation error of the uncorrupted intensity information. The comparative experimental results show that the proposed structure-adaptive fuzziness can lead to effective restoration. An efficient implementation of this SAFE method is also realized via graphics-processing-unit-based parallelization. [ABSTRACT FROM AUTHOR]

Computational load remains a major concern when processing signals by means of sliding transforms. In this paper, we present an efficient algorithm for the fast computation of one-dimensional and two-dimensional sliding discrete Tchebichef moments. To do so, we first establish the relationships that exist between the Tchebichef moments of two neighboring windows taking advantage of Tchebichef polynomials’ properties. We then propose an original way to fast compute the moments of one window by utilizing the moment values of its previous window. We further theoretically establish the complexity of our fast algorithm and illustrate its interest within the framework of digital forensics and more precisely the detection of duplicated regions in an audio signal or an image. Our algorithm is used to extract local features of such a signal tampering. Experimental results show that its complexity is independent of the window size, validating the theory. They also exhibit that our algorithm is suitable to digital forensics and beyond to any applications based on sliding Tchebichef moments. [ABSTRACT FROM PUBLISHER]

Low-dose computed tomography (LDCT) images are often severely degraded by amplified mottle noise and streak artifacts. These artifacts are often hard to suppress without introducing tissue blurring effects. In this paper, we propose to process LDCT images using a novel image-domain algorithm called “artifact suppressed dictionary learning (ASDL).” In this ASDL method, orientation and scale information on artifacts is exploited to train artifact atoms, which are then combined with tissue feature atoms to build three discriminative dictionaries. The streak artifacts are cancelled via a discriminative sparse representation operation based on these dictionaries. Then, a general dictionary learning processing is applied to further reduce the noise and residual artifacts. Qualitative and quantitative evaluations on a large set of abdominal and mediastinum CT images are carried out and the results show that the proposed method can be efficiently applied in most current CT systems. [ABSTRACT FROM AUTHOR]

An introduction is presented in which the editor discusses various papers within the issue on topics including biomedical engineering, computational biology and the role of ontologies in biology.

Prostate segmentation in 3-D transrectal ultrasound images is an important step in the definition of the intra-operative planning of high intensity focused ultrasound (HIFU) therapy. This paper presents two main approaches for the semi-automatic methods based on discrete dynamic contour and optimal surface detection. They operate in 3-D and require a minimal user interaction. They are considered both alone or sequentially combined, with and without postregularization, and applied on anisotropic and isotropic volumes. Their performance, using different metrics, has been evaluated on a set of 28 3-D images by comparison with two expert delineations. For the most efficient algorithm, the symmetric average surface distance was found to be 0.77 mm. [ABSTRACT FROM AUTHOR]

The derivation of moment invariants has been extensively investigated in the past decades. In this paper, we construct a set of invariants derived from Zernike moments which is simultaneously invariant to similarity transformation and to convolution with circularly symmetric point spread function (PSF). Two main contributions are provided: the theoretical framework for deriving the Zernike moments of a blurred image and the way to construct the combined geometric-blur invariants. The performance of the proposed descriptors is evaluated with various PSFs and similarity transformations. The comparison of the proposed method with the existing ones is also provided in terms of pattern recognition accuracy, template matching and robustness to noise. Experimental results show that the proposed descriptors perform on the overall better. [ABSTRACT FROM AUTHOR]

Processing blurred images is a key problem in many image applications. Existing methods to obtain blur invariants which are invariant with respect to centrally symmetric blur are based on geometric moments or complex moments. In this paper, we propose a new method to construct a set of blur invariants using the orthogonal Legendre moments. Some important properties of Legendre moments for the blurred image are presented and proved. The performance of the proposed descriptors is evaluated with various point-spread functions and different image noises. The comparison of the present approach with previous methods in terms of pattern recognition accuracy is also provided. The experimental results show that the proposed descriptors are more robust to noise and have better discriminative power than the methods based on geometric or complex moments. [ABSTRACT FROM AUTHOR]

The article discusses the evolution of computer-assisted and image-guided therapy. It explores the breakthrough and impact of therapeutic methods including temperature-based therapies, conventional radiotherapy, and laser-based therapy as well as multimodal therapy which minimizes impact to the surrounding tissues and organs. It also outlines the innovations of the physically enhanced and image-guided drug therapy where drug delivery is activated by heat, ultrasound, and light.

The present work describes a Bayesian maximum a posteriori (MAP) method using a statistical multiscale wavelet prior model. Rather than using the orthogonal discrete wavelet transform (DWT), this prior is built on the translation invariant wavelet transform (TIWT). The statistical modeling of wavelet coefficients relies on the generalized Gaussian distribution. Image reconstruction is performed in spatial domain with a fast block sequential iteration algorithm. We study theoretically the TIWT MAP method by analyzing the Hessian of the prior function to provide some insights on noise and resolution properties of image reconstruction. We adapt the key concept of local shift invariance and explore how the TIWT MAP algorithm behaves with different scales. It is also shown that larger support wavelet filters do not offer better performance in contrast recovery studies. These theoretical developments are confirmed through simulation studies. The results show that the proposed method is more attractive than other MAP methods using either the conventional Gibbs prior or the DWT-based wavelet prior. [ABSTRACT FROM AUTHOR]

The article describes initiatives to promote collaborative research between academics, clinicians and industrials in key areas of medical technology. Research and development spending in the medical technology industry is generally acknowledged to be between five and ten percent of sales. The European Commission and industry invest heavily in regular user training in medical technology. The five priority areas of medical informatics and telemedicine, medical imaging, biomedical instrumentation, biomaterials and techniques for disabled people have been identified and examined.

The article provides the basic formulations of moments. The authors review recently studied orthogonal moments including Tchebichef, Krawtchouk, Racah, dual Hahn moments, which all posses the property important in image processing, specifically in medical imaging. They discuss the different classification of moments: nonorthogonal moments, geometric moments, rotational moments, orthogonal moments, continuous orthogonal moments and discrete orthogonal moments, then sketch their different expressions, instead of presenting their theoretical details.

The article reports on the results of a bibliometric analysis to determine how the scientific contents are evolving over time, and what relations might exist between journals and conferences. It focuses on biomedical engineering production (BME). The article describes how BME and the journals evolved with time. It shows that the most frequent words are common to the journals.

This paper reports on a method for left ventricle three-dimensional (3-D) reconstruction from two orthogonal ventriculograms. The proposed algorithm is voxel-based and takes into account the conical projection geometry associated with the biplane image acquisition equipment. The reconstruction process starts with an initial ellipsoidal approximation derived from the input ventriculograms. This model is subsequently deformed in such a way as to match the input projections. To this end, the object is modeled as a 3-D Markov-Gibbs random field, and an energy function is defined so that it includes one term that models the projections compatibility and another one that includes the space-time regularity constraints. The performance of this reconstruction method is evaluated by considering the reconstruction of mathematically synthesized phantoms and two 3-D binary databases from two orthogonal synthesized projections. The method is also tested using real biplane ventriculograms. In this case, the performance of the reconstruction is expressed in terms of the projection error, which attains values between 9.50% and 11.78% for two biplane sequences including a total of 55 images. [ABSTRACT FROM AUTHOR]

The section introduces a series of papers which deal with integrative physiology, centered on the organismal level of systems biology.

The article studies IEEE publications using correspondence analysis. The IEEE subset consists of 354, 356 documents published between 1967 and 2003. The documents include papers in journals, conference papers and conference proceedings. The findings show the evolution over time of the contents of IEEE publications. The results also reveal that the engineering field is more attracted to computer science and less rooted to electronics and electrotechnical engineering.

The article discusses the macroimaging aspect of medical imaging. A classification is proposed that identifies motion from imaging and vice versa and involves correction of motion as well as evoked motion. A method wherein the objects of interest are made visible due to some internal motion was performed through the use of magnetic resonance angiography. It is noted that imaging of motion which is not corrected or compensated may lead to blurring of image quality. Reconstruction from motion and evoked motion are further discussed.

Comments on the rationale for the research on computer vision and graphics. Reason for the search for more windows in science; Acquisition of scientific autonomy; Expression of concerns on biomedical issues.

Clinical interventional hemodynamic studies quantify the ventricular function from two-dimensional (2-D) X-ray projection images without having enough information of the actual three-dimensional (3-D) shape of this cardiac cavity. This paper reports a left ventricle 3-D reconstruction method from two orthogonal angiographic projections. This investigation is motivated by the lack of information about the actual 3-D shape of the cardiac cavity. The proposed algorithm works in 3-D space and considers the oblique projection geometry associated with the biplane image acquisition equipment. The reconstruction process starts by performing an approximate reconstruction based on the Cylindrical Closure Operation and the Dempster--Shafer theory. This approximate reconstruction is appropriately deformed in order to match the given projections. The deformation procedure is carried out by an iterative process that, by means of the Dempster--Shafer and the fuzzy integral theory, combines the information provided by the projection error and the connectivity between voxels. The performance of the proposed reconstruction method is evaluated by considering first the reconstruction of two 3-D binary databases from two orthogonal synthetized projections, obtaining errors as low as 6.48%. The method is then tested on real data, where two orthogonal preprocessed angiographic images are used for reconstruction. The performance of the technique, in this case, is assessed by means of the projection error, whose average for both views is 7.5%. The reconstruction method is also tested by performing the 3-D reconstruction of a ventriculographic sequence throughout an entire cardiac cycle. [ABSTRACT FROM AUTHOR]

Discusses biomedical signal processing schemes. Time-series processing methods; Time and frequency transforms; Blind signal processing; Empirical mode decomposition; Kernel methods; Data mining.

Computational modeling and imaging in biology and medicine are gaining more and more interest with the discovery of in-depth structural and functional knowledge at all space and time scales (molecule to proteins, cells to organs and organizms). The recursion between description levels for highly dynamical, interacting and complex systems, i.e the integrative approach, is a very challenging topic where formal models, observational tools and experimental investigations have to be closely designed, coupled and confronted together. Imaging techniques play a major role in this interdisciplinary attempt to elucidate this biocomplexity: they convey relevant information about the underlying mechanisms, depict the conformations and anatomical topologies and draw the biophysical laws they may follow. Furthermore, the basic image analysis tools (from calibration to segmentation, motion estimation and registration up to pattern recognition) are generic enough to be of value whatever the objects under consideration. The same comments apply when Computer Graphics or Virtual Reality techniques are concerned. This paper will survey the recent contributions dealing with both models, imaging data and processing frames. Examples ranging over different scales, from macro to nano, will be given in order to enhance the mutual benefits and perspectives that can be expected from this coupling. [ABSTRACT FROM AUTHOR]

In this paper, a model-based approach to medical image analysis is presented. It is aimed at understanding the influence of the physiological (related to tissue) and physical (related to image modality) processes underlying the image content. This methodology is exemplified by modeling first, the liver and its vascular network, and second, the standard computed tomography (CT) scan acquisition. After a brief survey on vascular modeling literature, a new method, aimed at the generation of growing three-dimensional vascular structures perfusing the tissue, is described. A solution is proposed in order to avoid intersections among vessels belonging to arterial and/or venous trees, which are physiologically connected. Then it is shown how the propagation of contrast material leads to simulate time-dependent sequences of enhanced liver CT slices. [ABSTRACT FROM AUTHOR]

Focuses on creation of animated models to improve the understanding of the complex changes that occur during normal heart development. Development of a three-dimensional model capable of rendering the dynamics of the various stages of normal heart development; Availability of a videotape of a full-length animation. INSET: Development of Cardiac Outflow Tracts..

Editorial. Introduces a series of articles on the information technology applications and the infrastructure innovations that would harness biomedical and health care programs in the 21st century. Development and applications of information technology; Overview of the concept of a national information infrastructure; High-performance computing and communication; Next-generation Internet.

Presents information on the development of a time-frequency scaling method, based on the matching pursuit (MP) method, for use in phonocardiography. Examination of the MP method; Assessment of three types of transformations; Analysis of statistical data compiled in this research; Details on the time-scaling of phonocardiograms.