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Additional file 2: Figure S1. Gene duplication and collinearity analysis among Flower time genes from including B.rapa and A.thaliana. Lines connecting genes depict ortholog pairs diverged from the same ancestor. A1-A10 indicated B.rapa chromosomes, and Ath01-Ath05 displayed A.thaliana chromosomes. Figure S2. RNA-seq results of key genes in the flowering time pathway.

Additional file 2: Figure S1. Gene duplication and collinearity analysis among Flower time genes from including B.rapa and A.thaliana. Lines connecting genes depict ortholog pairs diverged from the same ancestor. A1-A10 indicated B.rapa chromosomes, and Ath01-Ath05 displayed A.thaliana chromosomes. Figure S2. RNA-seq results of key genes in the flowering time pathway.

Additional file 2: Fig. S1. Statistics of abnormal meiotic course in autotetraploid B. rapa. Fig. S2. Immunolocalization of ÎłH2AX in diploid and autotetraploid B. rapa. Fig. S3. Characterization of proteomics data. Fig. S4. Reproducibility analysis of three biological replicates by Pearson correlation coefficient. Fig. S5. Gene ontology classification and subcellular localization of identified proteins. Fig. S6. Expression patterns of 12 DEPs associated with phosphorylation in diploid and autotetraploid B. rapa. Fig. S7. KOG function classification of identified proteins. Fig. S8. Predicted proteinâ protein interaction network of meiosis-related DEPs in autotetraploid B. rapa. Fig. S9. Correlation analysis for the identified 305 DEPs and their transcriptome.