1. Genetic diversity of Cryptosporidium identified in clinical samples from cities in Brazil and Argentina
- Author
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Flavia de Souza Cunha, José Mauro Peralta, Fernando Campos Sodré, Silvana Carnevale, Regina Helena Saramago Peralta, María Laura Pantano, Jorge Néstor Velásquez, Sidnei da Silva, and Osvaldo Germán Astudillo
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Male ,0301 basic medicine ,lcsh:QR1-502 ,Ciencias de la Salud ,Cryptosporidiosis ,lcsh:Microbiology ,law.invention ,0302 clinical medicine ,law ,Genotype ,gp60 subtypes ,Parasitología ,Child ,Polymerase chain reaction ,Genetics ,biology ,virus diseases ,Cryptosporidium ,Articles ,Middle Aged ,PCR ,Cryptosporidium parvum ,Child, Preschool ,purl.org/becyt/ford/3 [https] ,Female ,Restriction fragment length polymorphism ,Cryptosporidium hominis ,Brazil ,Polymorphism, Restriction Fragment Length ,Adult ,Microbiology (medical) ,lcsh:Arctic medicine. Tropical medicine ,CIENCIAS MÉDICAS Y DE LA SALUD ,Adolescent ,lcsh:RC955-962 ,030106 microbiology ,030231 tropical medicine ,Argentina ,DNA, Ribosomal ,purl.org/becyt/ford/3.3 [https] ,Young Adult ,03 medical and health sciences ,genotypes ,parasitic diseases ,TaqMan ,Humans ,Aged ,Genetic diversity ,Genetic Variation ,Infant ,Sequence Analysis, DNA ,DNA, Protozoan ,biology.organism_classification ,Virology ,Gp60 - Abstract
The identification and characterisation of Cryptosporidiumgenotypes and subtypes are fundamental to the study of cryptosporidiosis epidemiology, aiding in prevention and control strategies. The objective was to determine the genetic diversity ofCryptosporidium in samples obtained from hospitals of Rio de Janeiro, Brazil, and Buenos Aires, Argentina. Samples were analysed by microscopy and TaqMan polymerase chain reaction (PCR) assays forCryptosporidium detection, genotyped by nested-PCR-restriction fragment length polymorphism (RFLP) analysis of the 18S rRNA gene and subtyped by DNA sequencing of the gp60 gene. Among the 89 samples from Rio de Janeiro, Cryptosporidium spp were detected in 26 by microscopy/TaqMan PCR. In samples from Buenos Aires,Cryptosporidium was diagnosed in 15 patients of the 132 studied. The TaqMan PCR and the nested-PCR-RFLP detected Cryptosporidium parvum, Cryptosporidium hominis, and co-infections of both species. In Brazilian samples, the subtypes IbA10G2 and IIcA5G3 were observed. The subtypes found in Argentinean samples were IbA10G2, IaA10G1R4, IaA11G1R4, and IeA11G3T3, and mixed subtypes of Ia and IIa families were detected in the co-infections. C. hominis was the species more frequently detected, and subtype family Ib was reported in both countries. Subtype diversity was higher in Buenos Aires than in Rio de Janeiro and two new subtypes were described for the first time. Fil: Peralta, Regina Helena Saramago. Universidade Federal Fluminense; Brasil Fil: Velásquez, Jorge Néstor. Gobierno de la Ciudad de Buenos Aires. Hospital de Infecciosas "Dr. Francisco Javier Muñiz"; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Cunha, Flavia de Souza. Universidade Federal Fluminense; Brasil Fil: Pantano, María Laura. Dirección Nacional de Institutos de Investigación. Administración Nacional de Laboratorios e Institutos de Salud. Instituto Nacional de Enfermedades Infecciosas; Argentina Fil: Sodré, Fernando Campos. Universidade Federal Fluminense; Brasil Fil: Silva, Sidnei da. Fundación Oswaldo Cruz; Brasil Fil: Astudillo, Osvaldo Germán. Dirección Nacional de Institutos de Investigación. Administración Nacional de Laboratorios e Institutos de Salud. Instituto Nacional de Enfermedades Infecciosas; Argentina Fil: Peralta, José Mauro. Universidade Federal do Rio de Janeiro; Brasil Fil: Carnevale, Silvana. Dirección Nacional de Institutos de Investigación. Administración Nacional de Laboratorios e Institutos de Salud. Instituto Nacional de Enfermedades Infecciosas; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
- Published
- 2016
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