1. The chaos in calibrating crop models
- Author
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Daniel Wallach, Taru Palosuo, Peter Thorburn, Zvi Hochman, Emmanuelle Gourdain, Fety Andrianasolo, Senthold Asseng, Bruno Basso, Samuel Buis, Neil Crout, Camilla Dibari, Benjamin Dumont, Roberto Ferrise, Thomas Gaiser, Cecile Garcia, Sebastian Gayler, Afshin Ghahramani, Santosh Hiremath, Steven Hoek, Heidi Horan, Gerrit Hoogenboom, Mingxia Huang, Mohamed Jabloun, Per-Erik Jansson, Qi Jing, Eric Justes, Kurt Christian Kersebaum, Anne Klosterhalfen, Marie Launay, Elisabet Lewan, Qunying Luo, Bernardo Maestrini, Henrike Mielenz, Marco Moriondo, Hasti Nariman Zadeh, Gloria Padovan, Jørgen Eivind Olesen, Arne Poyda, Eckart Priesack, Johannes Wilhelmus Maria Pullens, Budong Qian, Niels Schütze, Vakhtang Shelia, Amir Souissi, Xenia Specka, Amit Kumar Srivastava, Tommaso Stella, Thilo Streck, Giacomo Trombi, Evelyn Wallor, Jing Wang, Tobias K.D. Weber, Lutz Weihermüller, Allard de Wit, Thomas Wöhling, Liujun Xiao, Chuang Zhao, Yan Zhu, Sabine J. Seidel, INRAE, Luke Natural Resources Institute Finland, CSIRO, Arvalis Institut du Végétal, Technical University of Munich, Michigan State University, University of Nottingham, University of Florence, University of Liege, University of Bonn, University of Hohenheim, University of Southern Queensland, Department of Computer Science, Wageningen University and Research Centre, University of Florida, China Agricultural University, KTH Royal Institute of Technology, Ottawa Research and Development Centre, Centre de coopération internationale en recherche agronomique pour le développement, Leibniz Centre for Agricultural Landscape Research, Jülich Research Centre, Swedish University of Agricultural Sciences, Hillridge Technology Pty Ltd, Institute for Crop and Soil Science, CNR-ENEA-EURATOM Association, Aarhus University, Kiel University, Helmholtz Zentrum München - German Research Center for Environmental Health, Technische Universität Dresden, University of Carthage, Nanjing Agricultural University, Aalto-yliopisto, and Aalto University
- Subjects
Structure (mathematical logic) ,Estimation ,Mathematical optimization ,Process modeling ,Estimation theory ,Computer science ,Calibration recommendations ,Experimental data ,Process-based models ,CHAOS (operating system) ,Phenology ,Calibration ,Range (statistics) ,Parameter estimation - Abstract
Funding Information: This work was in part supported by the Collaborative Research Center 1253 CAMPOS (Project 7: Stochastic Modeling Framework), funded by the German Research Foundation ( DFG , Grant Agreement SFB 1253/1 2017 ), the Academy of Finland through projects AICropPro ( 316172 ) and DivCSA ( 316215 ) and Natural Resources Institute Finland (Luke) through a strategic project BoostIA, the BonaRes project ''Soil3'' ( BOMA 03037514 ) of the Federal Ministry of Education and Research ( BMBF ), Germany, the Deutsche Forschungsgemeinschaft ( DFG , German Research Foundation ) under Germany's Excellence Strategy - EXC 2070–390732324 EXC (PhenoRob), the project BiomassWeb of the GlobeE programme (Grant number: FKZ031A258B ) funded by the Federal Ministry of Education and Research ( BMBF , Germany), the INRA ACCAF meta-programme, the German Federal Ministry of Education and Research ( BMBF ) in the framework of the funding measure “Soil as a Sustainable Resource for the Bioeconomy – BonaRes”, project “BonaRes (Module B): BonaRes Centre for Soil Research , subproject B” (grant 031B0511B ), the National Key Research and Development Program of China ( 2017YFD0300205 ), the National Science Foundation for Distinguished Young Scholars ( 31725020 ), the Priority Academic Program Development of Jiangsu Higher Education Institutions ( PAPD ), the 111 Project ( B16026 ), and China Scholarship Council , the Agriculture and Agri-Food Canada's Project 1387 under he Canadian Agricultural Partnership, the DFG Research Unit FOR 1695 ‘Agricultural Landscapes under Global Climate Change – Processes and Feedbacks on a Regional Scale, the U.S. Department of Agriculture National Institute of Food and Agriculture (award no. 2015-68007-23133 ) and USDA / NIFA HATCH grant N. MCL02368 , the National Key Research and Development Program of China ( 2016YFD0300105 ), The Broadacre Agriculture Initiative, a research partnership between University of Southern Queensland and the Queensland Department of Agriculture and Fisheries , the Academy of Finland through project AI-CropPro ( 315896 ), the JPI FACCE MACSUR2 project, funded by the Italian Ministry for Agricultural, Food, and Forestry Policies ( D.M. 24064/7303/15 of 6/Nov/2015), the Ministry of Education, Youth and Sports of Czech Republic through SustES - Adaption strategies for sustainable ecosystem services and food security under adverse environmental conditions (project no. CZ.02.1.01/0.0/0.0/16_019/000797 ). The order in which the donors are listed is arbitrary. Funding Information: This work was in part supported by the Collaborative Research Center 1253 CAMPOS (Project 7: Stochastic Modeling Framework), funded by the German Research Foundation (DFG, Grant Agreement SFB 1253/1 2017), the Academy of Finland through projects AICropPro (316172) and DivCSA (316215) and Natural Resources Institute Finland (Luke) through a strategic project BoostIA, the BonaRes project ''Soil3'' (BOMA 03037514) of the Federal Ministry of Education and Research (BMBF), Germany, the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy - EXC 2070?390732324 EXC (PhenoRob), the project BiomassWeb of the GlobeE programme (Grant number: FKZ031A258B) funded by the Federal Ministry of Education and Research (BMBF, Germany), the INRA ACCAF meta-programme, the German Federal Ministry of Education and Research (BMBF) in the framework of the funding measure ?Soil as a Sustainable Resource for the Bioeconomy ? BonaRes?, project ?BonaRes (Module B): BonaRes Centre for Soil Research, subproject B? (grant 031B0511B), the National Key Research and Development Program of China (2017YFD0300205), the National Science Foundation for Distinguished Young Scholars (31725020), the Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD), the 111 Project (B16026), and China Scholarship Council, the Agriculture and Agri-Food Canada's Project 1387 under he Canadian Agricultural Partnership, the DFG Research Unit FOR 1695 ?Agricultural Landscapes under Global Climate Change ? Processes and Feedbacks on a Regional Scale, the U.S. Department of Agriculture National Institute of Food and Agriculture (award no. 2015-68007-23133) and USDA/NIFA HATCH grant N. MCL02368, the National Key Research and Development Program of China (2016YFD0300105), The Broadacre Agriculture Initiative, a research partnership between University of Southern Queensland and the Queensland Department of Agriculture and Fisheries, the Academy of Finland through project AI-CropPro (315896), the JPI FACCE MACSUR2 project, funded by the Italian Ministry for Agricultural, Food, and Forestry Policies (D.M. 24064/7303/15 of 6/Nov/2015), the Ministry of Education, Youth and Sports of Czech Republic through SustES - Adaption strategies for sustainable ecosystem services and food security under adverse environmental conditions (project no. CZ.02.1.01/0.0/0.0/16_019/000797). The order in which the donors are listed is arbitrary. Publisher Copyright: © 2021 Elsevier Ltd Calibration, the estimation of model parameters based on fitting the model to experimental data, is among the first steps in many applications of process-based models and has an important impact on simulated values. We propose a novel method of developing guidelines for calibration of process-based models, based on development of recommendations for calibration of the phenology component of crop models. The approach was based on a multi-model study, where all teams were provided with the same data and asked to return simulations for the same conditions. All teams were asked to document in detail their calibration approach, including choices with respect to criteria for best parameters, choice of parameters to estimate and software. Based on an analysis of the advantages and disadvantages of the various choices, we propose calibration recommendations that cover a comprehensive list of decisions and that are based on actual practices.
- Published
- 2021