1. Fragment-based discovery of sulfur-containing diarylbenzopyrimidines as novel nonnucleoside reverse transcriptase inhibitors
- Author
-
Yuan Lei, Erik De Clercq, Sheng Han, Chunlin Zhuang, Christophe Pannecouque, and Fen-Er Chen
- Subjects
STRUCTURAL BASIS ,Stereochemistry ,Chemistry, Multidisciplinary ,02 engineering and technology ,HIV-1 RT ,010402 general chemistry ,01 natural sciences ,chemistry.chemical_compound ,DESIGN ,NNRTIS ,Cytotoxicity ,Sulfur-containing DABPs ,Sulfonyl ,chemistry.chemical_classification ,Science & Technology ,POTENT ,Drug discovery ,General Chemistry ,EFAVIRENZ DMP-266 ,021001 nanoscience & nanotechnology ,Reverse transcriptase ,0104 chemical sciences ,Partition coefficient ,Chemistry ,chemistry ,Physical Sciences ,HIV-1 ,FBDD ,Thioacetamide ,0210 nano-technology ,Selectivity ,Lead compound ,DAPY - Abstract
Two series of sulfur-containing diarylbenzopyrimidines are designed by the fragment combination of a thioacetamide with our previous disclosed DABP 3 and further oxidation. The best compound 6e with a sulfonyl scaffold displayed EC50 values of 0.0356 μmol/L against WT and 0.0228 μmol/L against HIV K103N mutant strain. More pronounced, it had a lower cytotoxicity (CC50 = 99.6 μmol/L), higher selectivity index (SIWT = 2799, SIK103N = 4375) and better calculated logarithm of the octanol-water partition coefficient (cLogP) than the lead compound 3. Molecular docking and dynamics provided the binding modes of these compounds with reverse transcriptase, explaining their activity. Collectively, the new compounds could be candidates for anti-HIV drug discovery.
- Published
- 2020