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Background The Glutathione S-transferases ( GST s) genes deletion polymorphisms have been associated with the progression of several cancers. The association studies between the 2 GST s ( GSTM1 and GSTT1 ) null polymorphisms with the susceptibility to renal cell carcinoma (RCC) have been inconclusive. Therefore, with the inclusion of our own data, we performed a comprehensive meta-analysis to assess the association between these 2 polymorphisms and the risk of RCC. Methods A systematic literature search was carried out for studies published in the PubMed, EMBASE, Cochrane library, and Google Scholar from 1997 to December 2014. Results were stated as pooled odds ratios (ORs) for nonparametric data after heterogeneity analysis with 95% CI using fixed effect or random effect model. Results We systematically selected 13 relevant studies after thorough searches from the databases. Data showed no association between the GSTM1 and the GSTT1 null genotypes and the risk of RCC (OR = 1.01; CI: 0.92–1.11; P = 0.89 for GSTM1 and OR = 1.14; CI: 0.91–1.42; P = 0.25 for GSTT1 ). No association was found when the data were stratified according to the geographical/ethnic basis, source of control, and the risk factor evaluation. Subgroup analysis of occupational exposure to pesticides showed an inverse association of the active genotypes of both GSTM1 and GSTT1 polymorphisms with the exposed group of RCC ( P P GSTM1/GSTT1 significantly increased the susceptibility to RCC by 1.4-fold ( P = 0.001). This association remained significant for the Asian populations in subgroup analysis (OR = 1.8; CI: 1.30–2.49; P = 0.0004). Conclusion In conclusion, this meta-analysis suggests that the 2 GST s deletion polymorphisms independently have no association with the risk of RCC. However, combination of both deletions increases the risk of developing the RCC.