1. Mutation spectrum of 260 dystrophinopathy patients from Turkey and important highlights for genetic counseling
- Author
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Hülya Kayserili, Haluk Topaloglu, Ayaz Aghayev, Zehra Oya Uyguner, Sahin Avci, Hacer Durmus, Zuhal Yapici, Pinar Tekturk, Seher Başaran, Yesim Parman, Umut Altunoglu, Piraye Oflazer-Serdaroglu, B Sevinc Rustemoglu, Gulendam Bagirova, Feza Deymeer, Güven Toksoy, and Birsen Karaman
- Subjects
Adult ,Male ,0301 basic medicine ,Turkey ,Duchenne muscular dystrophy ,Genetic counseling ,In silico ,Genetic Counseling ,Chromosomal translocation ,Biology ,Carrier testing ,medicine.disease_cause ,Cohort Studies ,Dystrophin ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Multiplex ligation-dependent probe amplification ,Child ,Genetics (clinical) ,Genetics ,Mutation ,High-Throughput Nucleotide Sequencing ,Infant ,Karyotype ,Sequence Analysis, DNA ,medicine.disease ,Muscular Dystrophy, Duchenne ,Phenotype ,030104 developmental biology ,Neurology ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Female ,Neurology (clinical) ,030217 neurology & neurosurgery - Abstract
We genetically evaluated 260 dystrophinopathy patients from Turkey. Karyotyping as an initial test in female patients, followed stepwise by multiplex ligation-dependent probe amplification and by targeted next-generation sequencing of DMD revealed definitive genetic diagnoses in 214 patients (82%), with gross deletions/duplications in 153 (59%), pathogenic sequence variants in 60 (23%), and X-autosome translocation in one. Seven of the gross and 27 of the sequence variants found novel. In silico prediction, co-segregation and transcript assays supported the pathogenic nature of the novel silent (p.Lys534=) and the splice site (c.4345-12C>G) alterations. From a total of 189 singleton cases, 154 (82%) had pathogenic alterations. From 138 of those who had maternal carrier testing, 68 out of 103 (66%) showed gross and 11 out of 35 (31%) showed small pathogenic variants. This suggests that the de novo occurrences in DMD appear approximately 2.1 times more frequently in meiotic unequal crossing-over than in uncorrected replication errors. Our study also disclosed three mothers as obligate gonadal mosaic carriers. Family-based investigation of dystrophinopathy patients is crucial for the ascertainment of novel or rare variants and also for counseling and follow-up care of the families.
- Published
- 2019
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