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International audience; The sustainable exploitation of sea resources is based on the understanding of population distribution, structure and functioning. The mismatch between stock units and fish populations can dramatically bias the assessment and lead to irrelevant or even detrimental management measures. The common sole of the Eastern English Channel (EEC; ICES division VIId) is a flatfish species of high interest that has been overexploited over the last decades. Low connectivity induced by early life stages across the stock was previously known, but gaps remained regarding the role of adults in population connectivity and spatial structure. In this study we have filled these gaps by (1) gathering all the information on stock identity through five population- and individual-based approaches, and (2) combining this information in a semi-quantitative framework, i.e. the Stock Differentiation Index (SDI). Regarding the population-based approaches, growth and abundance-at-age analyses highlighted a lasting signal of population structure, with three population subunits. Regarding the individual-based approaches, genetic analysis highlighted low but significant genetic differentiation between the three subunits over an evolutionary time scale. Besides, a mark-recapture study demonstrated a low level of exchange between these subunits. Finally, an analysis of otolith shape pinpointed spatial variation between the three subunits. Overall, the SDI = 0.93 suggested evidence of spatial structure. The misalignment of the current stock definition with the underlying biological metapopulation now requires the improvement of the assessment-management to ensure its sustainable exploitation.

Estuarine fish assemblages are subject to a great environmental variability that largely depends on both upstream fluvial and downstream marine influences. From this ecohydrological view, our study introduces a macroecological approach aiming to identify the main environmental factors that structure fish assemblages among European tidal estuaries. The present paper focuses on the influence of large scale environmental gradients on estuarine fish species richness. The environment of 135 North-eastern Atlantic estuaries from Portugal to Scotland was characterized by various descriptors especially related to hydromorphology. Major environmental trends among estuaries were underlined using multivariate techniques and cluster analyses applied to abiotic data. In particular, an integrative system size covariate was derived from a principal component analysis. Factors explaining patterns of species richness at different scales from local habitat to regional features were highlighted. Based on generalised linear models, the estuarine system size, and more particularly the entrance width, and also the continental shelf width were identified as the best explanatory variables of estuarine fish species richness at a large scale. Our approach provides a standardized method to estimate the relationship between fish assemblages and environmental factors. This constitutes a first step in assessing estuarine ecological status and studying the effects of additional factors such as anthropogenic disturbances.

This study describes the spatial distribution of young-of-the-year common sole based on beam trawl surveys conducted in late summer in the coastal and estuarine parts of the Bay of Biscay (France). Previous studies showed that habitat suitability for juvenile common sole varies according to physical factors and notably bathymetry and sediment structure. Nevertheless, the use of these descriptors alone to model habitat suitability led to considerable unexplained variability in juvenile common sole distribution. Hence, the epibenthic macro- and megafauna collected during beam trawl surveys was taken into account to improve models of habitat suitability for these juvenile flatfish. Ecotrophic guilds based on life traits (behaviour, mobility and feeding) were used to develop generic indicators of trawled benthic fauna. These synthetic descriptors were used in generalized linear models of habitat suitability in order to characterize the distribution of juvenile common sole. This approach significantly improved the description based on physical descriptors and allowed demonstrating that young common sole distribution is related to the density of trawled deposit and suspension feeders and also of carnivorous organisms. These models provide a reliable method to develop indicators of nursery habitat suitability from trawl survey data with the aim of assessing and surveying their quality. (c) 2006 Elsevier B.V. All rights reserved.

This study describes the spatial distribution of young-of-the-year sole based on autumnal beam trawl surveys conducted in the Bay of Biscay (France) during a 15-y period. Previous studies showed that habitat suitability for juvenile sole varies according to physical factors such as bathymetry, sediment structure and river plume influence. These factors, which are known exhaustively for the entire Bay of Biscay from static maps (bathymetry and granulometry) or temporal maps based on a hydrodynamic model (the river plume), were used as descriptors in a generalised linear model of habitat suitability in order to characterise the distribution of juvenile 0-group sole according to delta distribution. This model was used to identify the habitats in which juvenile 0-group sole are concentrated. The respective areas of these habitats were determined from a Geographic Information System (GIS), and their respective contribution to the sole population in the Bay of Biscay was calculated in terms of the estimated number of young fish (GIS area×density derived from the model). Despite the great variability of survey data, this quantitative approach emphasises the highly important role of restricted shallow, muddy estuarine areas as nursery grounds of sole in the Bay of Biscay and demonstrates the relation between interannual variations of nursery habitat capacity (with respect to estuarine extent) and sole recruitment.

The Eastern Channel (ICES division 7d) is considered a unit for stock management of the common sole Solea solea and the plaice Pleuronectes platessa. At this scale, the aim of this work is to model the juvenile distribution of these flatfish. The database used, based on different surveys undertaken during the two last decades, includes 4500 coastal beam trawl hauls throughout the Eastern Channel coasts. Multivariate analyses are used to study the interannual fluctuations in flatfish recruitment of the region. This approach allows us to separate the Eastern Channel into homogeneous sectors with regard to these fluctuations. The physical parameters that contribute to the observed juvenile sole and plaice distributions are identified and their distributions are modelled using generalized linear models. The results of these models, and the areas of the different populations derived from a geographic information system, are used to identify the main nursery grounds and to compare their respective importance. This quantitative approach identifies the lack of estuarine dependence of the nursery grounds, and highlights those areas where anthropogenic disturbance could influence these populations. © 2001 Ifremer/CNRS/Inra/IRD/Cemagref/Editions scientifiques et medicales Elsevier SAS statistical models / geographical information system / nursery grounds / Pleuronectes platessa / Solea solea / Eastern Channel

The Bay of Brest is a semi-enclosed coastal ecosystem where primary production is nutrient-limited, even if huge nutrients loading from tributaries are present. The most striking feature of the bay is the semi-diurnal tidal influence, resulting in large water exchange with the continental shelf. A historical study of the available data has shown the steadiness of this ecosystem during the two last decades in spite of increasing eutrophic conditions. This study has focused on hydrodynamic exchange which is one of the factors supposed to explain the resistance of this ecosystem to eutrophication: this stirring hinders the formation of a persistent upper mixed layer where phytoplankton would be in contact with nutrient-rich brackish waters and available light. Moreover, horizontal tidal currents lead to huge exchanges with the Iroise Sea and, then, to big losses of nutrients and living matter. To study this hydrodynamic influence thoroughly, a physical/biological model of this bay has been developed. This box model, based on the horizontal tidal circulation, has been developed thanks to “ELISE”, an ecological modelling software and, then, tuned and validated on two data sets corresponding with the years 1977 and 1993. The model has allowed us to quantify the influence of hydrodynamics, climatic conditions and biological factors on biogeochemical processes in this ecosystem. It contributes to explain the good resistance of the Bay of Brest ecosystem to eutrophic conditions; both the hydrodynamic properties of this bay and the grazing pressure have prevented it from disturbances caused by high nitrogen loading from the watersheds and explain the steadiness of phytoplankton stocks in spite of increased loading. So, these results allow us to say that, even if nitrogen inputs increase continues, phytoplankton stocks will not increase in significant proportions. Nevertheless, changes in the phytoplanktonic populations may occur if such an enrichment continues.

The Bay of Brest is a semi-enclosed coastal ecosystem receiving high nutrients loading from freshwater inputs. In order to analyse the response of phytoplankton stocks to increasing eutrophic conditions, a survey of the annual cycle of hydrographic properties, nutrients and chlorophyll a concentrations, and carbon uptake rates was performed at four stations in 1993. This database has been compared to earlier measurements performed during several comparable surveys within the last 20 years. As compared to the seventies, a doubled nitrate loading is now entering this ecosystem, which is related to increased agricultural activities on the drainage basins, while the geographical origin of the nitrate input has been modified. As a result of these anthropogenic modifications, summer averaged Si/N stoichiometric balance has decreased during the two last decades but, contrary to what has been observed in other coastal ecosystems, phytoplankton stocks have not increased. Several ecological factors have hindered eutrophication: the high hydrodynamic mixing with adjacent marine waters, caused by the macrotidal regime, induces important nutrients losses, temperature and mostly light limit primary production while Si and P high recycling maintain nitrogen limitation in this ecosystem. Conjunction of these non-anthropogenic factors explains the global stability of phytoplankton stocks.