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The red gorgonian Paramuricea clavata is a fundamental ecosystem engineer of coralligenous biocenosis in the Mediterranean Sea, where it plays crucial ecological functions and enhances the habitat biodiversity. However, this species is strongly endangered due to climate change-related stressors such as mucilage events, which have increased in recent decades causing extensive damage and mortality, but whose impacts at the molecular and cellular levels are still unexplored. In this study, different cellular stress biomarkers were analyzed in mucilage-colonized P. clavata specimens living in the Portofino Marine Protected Area (Ligurian Sea, Italy), in order to elucidate the cellular pathways affected by mucilage and the cellular defense mechanisms adopted. Within these colonies, portions of healthy tissue located at different distances from mucilage-induced necrosis were considered. Our results showed that mucilage affected the cellular oxidative status and impaired lipid cell membranes of the whole P. clavata colony. Indeed, an increase in the superoxide dismutase (SOD) and glutathione reductase (GR) enzymatic activity and in the level of lipid peroxidation (LPO) was detected in colonies showing mucilage-induced necrotic tissues compared to healthy ones. In particular, fragments sampled just next to the necrotic tissue displayed the highest levels of SOD and LPO, indicating that harmful oxidative damage was in progress, especially in portions neighboring the mucilage colonization. In this context, the up-regulation of the antioxidant mechanisms might represent a defense and a barrier from hypoxic or anoxic conditions created by mucilage overgrowth or by the invasion of toxic organisms embedded in the mucilaginous aggregates. On the contrary, the cellular protein homeostasis, analyzed by the expression of the 60-kDa Heat shock protein (Hsp60), was not altered by the mucilage. This analysis contributes to provide new insights into the cellular and molecular response of gorgonians to a stress source whose effects are likely to worsen in a climate change scenario.

Shallow hydrothermal vents emit warm water, carbon dioxide, toxic chemicals, nutrients and reduced compounds that altogether mimic climate and human impacts, and are therefore considered as ‘natural laboratories’ at which can be investigated the effects of these stressors on marine ecosystems. One of the effects more thoroughly investigated is the impact of reduced pH on marine biodiversity. Calcifying organisms, such as corals, are expected to be more affected, but their response to reduced pH values in seawater has been tackled mostly by laboratory studies. Here, we assessed coral recruitment and juvenile survival, two fundamental processes for coral reef maintenance and resilience, in shallow reefs of North Sulawesi (Indonesia) close to hydrothermal vents. Differences in abundance of coral recruits (

Marine coastal ecosystems are facing structural and functional changes due to the increasing human footprint worldwide, and the assessment of their long-term changes becomes particularly challenging. Measures of change can be done by comparing the observed ecosystem status to a purposely defined reference condition. In this paper, a geospatial modelling approach based on 2D mapping and morphodynamic data was used to predict the natural position of the upper limit (i.e., the landward continuous front) of Posidonia oceanica seagrass meadows settled on soft bottom. This predictive model, formerly developed at the regional spatial scale, was here applied for the first time at the Mediterranean spatial scale in eight coastal areas of Spain, France, Italy, and Greece showing different coastal morphologies and hydrodynamic characteristics, and affected by a number of natural and/or human local disturbances. The model was effective in measuring the regression (i.e., seaward withdrawal) of the meadow upper limit. In all the meadows investigated the upper limit was regressed, laying deeper than the reference condition, with the proportion of regression ranging from 17.7% to 98.9%. The highest values of regression were found in Spain and in France, and were consistent with the highest levels of fragmentation detected with map analysis and of coastal pressures. This geospatial modelling approach represents an effective tool to define the reference conditions when proper pristine areas or historical data are not available, thus allowing the assessment of long-time changes experienced by seagrass ecosystems due to human impacts.

International audience; The dearth of long-time series hampers the measurement of the ecosystem change that followed the global marine climate shift of the 1980-90s. The sessile communities of Portofino Promontory reefs (Ligurian Sea, NW Mediterranean) have been discontinuously studied since the 1950s. Collating, information from various sources, three periods of investigations have been distinguished: 1) 1950-70s; 2) 1980-90s; 3) 2000-10s. A cooler phase in time I was followed by a rapid warming in time 2, to stabilize at about 0.5 degrees C higher in time 3. Human pressure grew impressively, especially after the establishment of a MPA in 1999. Multivariate analyses evidenced a major change of community composition in time 2. Some species disappeared or got rarer, many found refuge at depth, and among the newcomers there were recently introduced alien species. This study demonstrated the importance of descriptive historical data to understand magnitude and pattern of change in the long term evolution of marine ecosystems. (C) 2016 Elsevier Ltd. All rights reserved.

Coral reefs are threatened by multiple global and local disturbances. The Maldives, already heavily hit by the 1998 mass bleaching event, are currently affected also by growing tourism and coastal development that may add to global impacts. Most of the studies investigating effects of local disturbances on coral reefs assessed the response of communities along a horizontal distance from the impact source. This study investigated the status of a Maldivian coral reef around an island where an international touristic airport has been recently (2009–2011) built, at different depths along the reef profile (5–20 m depth) and considering the change in the percentage of cover of five different non-taxonomic descriptors assessed through underwater visual surveys: hard corals, soft corals, other invertebrates, macroalgae and abiotic attributes. Eight reefs in areas not affected by any coastal development were used as controls and showed a reduction of hard coral cover and an increase of abiotic attributes (i.e. sand, rock, coral rubble) at the impacted reef. However, hard coral cover, the most widely used descriptor of coral reef health, was not sufficient on its own to detect subtle indirect effects that occurred down the reef profile. Selecting an array of descriptors and considering different depths, where corals may find a refuge from climate impacts, could guide the efforts of minimising local human pressures on coral reefs.

A new index of ecological status, named Mesophotic Assemblages Ecological Status (MAES) index, was elaborated on the basis of ROV (Remotely Operated Vehicle) photography and video footage in order to assess the status of mesophotic megabenthic assemblages from hard bottom. The index was tested on seven sites located between 50 and 150 m depth in the Ligurian and Tyrrhenian seas (western Mediterranean Sea). The MAES index considers three main parameters: (i) the community structure (number of megabenthic taxa, percent biotic cover in the basal layer, density of erect species); (ii) the condition of the dominant erect species (average height, percent of colonies with epibiosis/necrosis); (iii) the visible human impact (density of marine litter, including lost fishing gears). Two versions of the index have been elaborated, the complete version (MAES) and the quick version ( q -MAES), which showed comparable results, therefore suggesting the possibility of fastening assessment times. The sensitivity of the MAES index was correlated with the putative human pressure acting upon the site (semi-quantitatively assessed considering fishing effort and coastal urbanization). A standard working protocol related to the evaluation of the MAES index is here proposed with the intent to create an effective monitoring tool for the assessment of the ecological status of mesophotic assemblages on a large scale, as required by the EU Marine Strategy Framework Directive. MAES index will enhance the comprehension of the dynamics of mesophotic Mediterranean megabenthic assemblages with respect to human pressures and will also provide marine scientists and managers with a valuable tool specifically designed for the conservation of such vulnerable marine ecosystems.

Seagrass meadows are complex ecosystems representing an important source of biodiversity for coastal marine systems, but are subjected to numerous threats from natural and human-based influences. Due to their susceptibility to changing environmental conditions, seagrasses are habitually used in monitoring programmes as biological indicators to assess the ecological status of coastal environments. In this paper we used a non-destructive photo mosaicing technology to quantify seagrass distribution and abundance, and explore benefits of micro-cartographic analysis. Furthermore, the use of photogrammetric tools enhanced the method, which proved to be efficient due to its use of low-cost instruments and its simplicity of implementation. This paper describes the steps required to use this method in meadows of Posidonia oceanica, including: i) camera calibration procedures, ii) programming of video survey, iii) criteria to perform sampling activities, iv) data processing and micro-georeferenced maps restitution, and v) possible study applications.

International audience; Coral reefs are degrading worldwide, but little information exists on their previous conditions for most regions of the world. Since 1989, we have been studying the Maldives, collecting data before, during and after the bleaching and mass mortality event of 1998. As early as 1999, many newly settled colonies were recorded. Recruits shifted from a dominance of massive and encrusting corals in the early stages of recolonisation towards a dominance of Acropora and Pocillopora by 2009. Coral cover, which dropped to less than 10% after the bleaching, returned to pre-bleaching values of around 50% by 2013. The 2004 tsunami had comparatively little effect. In 2014, the coral community was similar to that existing before the bleaching. According to descriptors and metrics adopted, recovery of Maldivian coral reefs took between 6 and 15 years, or may even be considered unachieved, as there are species that had not come back yet.

Making nature's value visible to humans is a key issue for the XXI century and it is crucial to identify and measure natural capital to incorporate benefits or costs of changes in ecosystem services into policy. Emergy analysis, a method able to analyze the overall functioning of a system, was applied to reckon the value of main ecosystem services provided by Posidonia oceanica, a fragile and precious Mediterranean seagrass ecosystem. Estimates, based on calculation of resources employed by nature, resulted in a value of 172 € m(-2)a(-1). Sediment retained by meadow is most relevant input, composing almost the whole P. oceanica value. Remarks about economic losses arising from meadow regression have been made through a time-comparison of meadow maps. Suggested procedure represents an operative tool to provide a synthetic monetary measure of ecosystem services to be employed when comparing natural capital to human and financial capitals in a substitutability perspective.

Side Scan Sonar (SSS) is a common method for mapping seagrass meadows that allows to define meadow extent and typology. Should sonogram interpretation be efficient, repeated mapping would allow evaluation of spatial meadow dynamics through time. Here, maps of Posidonia oceanica (L.) Delile meadows from western Liguria (NW Mediterranean Sea) produced in 1990, 1991 and 2006 through SSS surveys, were processed with GIS (Geographical Information System) and compared by means of diachronic analysis to establish concordances and discordances. While any difference between maps of 1990 and 2006 might provide information about change in seagrass cover with time, the availability of maps taken at only one year of distance (1991 vs 1990) offered the unique opportunity to evaluate the efficiency of SSS mapping, as the slow dynamics of P. oceanica makes significant change over such a short time scale unrealistic in absence of any large-scale environmental catastrophe. Results showed obvious differences in P. oceanica meadow distribution among the three periods in most of the areas. The largest differences were found between the maps of 1990 and 1991. This discrepancy was probably due to erroneous interpretation of small, fragmented shallow-water meadows on sonograms. Errors in sonogram interpretation combine with inefficient positioning in old cartographies to blur the evaluation of change over large time scales (i.e. between 1990 and 2006). Extensive sea-truthing based on a rigorous design is mandatory for efficient acoustic mapping of seagrass meadows.

a b s t r a c t Human use of ecosystem resources and services is increasing worldwide, generating pressures that alter ecosystem structure, functioning and provision of services. Unexpected ecosystem change is becoming frequent, and the complex ways through which multiple human pressures may interact leave con- servation practitioners and natural resource managers faced with high uncertainty. We developed a geospatial approach for modeling the complex relationships between multiple human pressures and coastal ecosystems status. This framework was then used to produce maps of the expected status of marine coastal ecosystems resulting from variation in the cumulative human pressure. The geospatial modeling approach we developed was tested on an emblematic study case requiring marine spatial plan- ning, i.e. a recently established marine protected area (MPA) that will have to coexist with the expansion of a close commercial harbor. In the study case presented, our modeling approach was used to predict the status of coastal ecosystems resulting from different management alternatives. Results showed that should Port Authority support MPA in reducing human pressures in the area, coastal ecosystems would not be expected to further deteriorate as a consequence of harbor expansion. Our approach proved effec- tive in modeling complex interaction among multiple pressures (e.g. synergisms) and predicting potential future scenarios. The implementation of this approach into geographical information systems (GIS) allows managers to represent the expected outcomes of their planned conservation efforts, thereby represent- ing an important decision-support tool for finding efficient management solutions in the face of complex interactions and high uncertainty.

Posidonia oceanica, the most important and abundant seagrass in the Mediterranean Sea, forms large meadows from the sea surface down to 40 m. The depth of the lower limit of the meadows marks the boundary between the infralittoral and the circalittoral zone, and is said to be normally set by light attenuation underwater, while the role of water movement has been little explored. In this paper, the position (i.e. distance from the shoreline and depth) of P. oceanica meadow lower limits along the whole Ligurian coastline (about 350 km) was related to the annual storm wave base. This depth represents the limit of interaction between waves and seafloor and corresponds to L0/2, where L0 is the annual offshore wave length. In all meadows, the lower limit has never been found deeper than the annual storm wave base, and its depth (Zc) showed related to L0 according to the equation Zc = 0.32∙L0 + 5.62. In the coastal tracts affected by the least intense waves, the reduction of water movement with depth represents the most important constraint to the seaward development of the meadow, whereas light availability plays a major role in meadows affected by the most intense waves. The present study represents the first attempt at understanding the role of hydrodynamic factors in setting the depth limit of seagrass meadows. If corroborated by future research at other sites, this will have important implications for both basic and applied science, as it would imply rethinking about the relative importance of water movement and light in seagrass depth distribution, and could allow for a better estimate of the extent of meadow regression in anthropized areas.

While coastal management activities have long been known to exert a strong influence on the health of marine ecosystems, neither scientists nor administrators have realized that small interventions may lead to disproportionately larger impacts. This study investigated the broad and long-lasting environmental consequences of the construction of an ill-planned, although small (only 12 m long) jetty for pleasure crafts on the hydrodynamic conditions and on the meadow of the seagrass Posidonia oceanica of an embayed cove in the Ligurian Sea (NW Mediterranean). There, P. oceanica used to develop on a high (>1.5 m) matte (a lignified terrace causing seafloor elevation) in which the leaves reach the surface and form a compact natural barrier to waves in front of the beach. Such a so-called ‘fringing reef’ of P. oceanica is today recognized of high ecological value and specific conservation efforts are required. The construction of the jetty implied the cutting of the matte, which directly destroyed part of the fringing reef. In addition, meadow mapping and sedimentological analyses coupled with morphodynamic modelling showed that the ecosystem of the whole cove had been greatly altered by the jetty. We used the geometric planform approach, a proper tool in the study of headland-controlled embayment, both to characterise the present situation of Prelo cove and to simulate the original one, before the jetty was built. In the long term, such a small jetty completely altered the configuration and the hydrodynamic conditions of the whole cove, splitting the original pocket beach into two smaller ones and creating strong rip-currents flowing seaward along the jetty. These rip-currents enhanced erosion of residual shallow portions of the meadow and further modified the sedimentary fluxes in shallow waters. A century after the construction of the jetty, an irreversible environmental damage has occurred, as the slow growing rate of P. oceanica implies that the high matte terrace and the fringing reef will hardly form again, even after the removal of the jetty. The lesson learnt from this study is that even such small, and therefore reputed intrinsically ‘innocent’, interventions on the coastal zone require accurate planning based on interdisciplinary studies to understand and respect the delicate interplay among morphological, hydrodynamic and ecological components.

article i nfo Quantification and comparisons of the structure of subtidal marine communities are essential for answering a suite of basic and applied ecological questions. However, time constraint associated with sampling underwater by scuba diving is a major obstacle to achieve adequate sampling effort. We tested a technique for rapid-assessment of hard substrate epibenthic communities, based on counts of the frequency of different taxa within sampling units (quadrats). This technique was compared to a broadly used technique, based on visual estimation of percent cover of taxa, to determine whether a significant amount of information is lost when using the rapid assessment technique. We applied both techniques in three case studies from the Ligurian Sea, in the NW Mediterranean. Field measurements showed that the same communities can be surveyed twice as fast with the frequency-count compared to the cover-estimation. Structural variables of communities as species richness and diversity yield almost identical values with the two techniques while dominance showed underestimated by frequency-count when compared to the cover-estimation. Multi- variate analyses indicated that the two techniques yield similar results, highlighting similar patterns of variation in all three case studies, particularly when data are transformed (square-root or fourth-root transformation). Our findings suggest that applying the frequency-count technique to the assessment of benthic communities is an effective strategy for increasing sampling effort when working underwater at depth.

The epiphyte community structure of the Posidonia oceanica leaves in three impacted meadows occurring in urbanised coastal areas was contrasted with that observed in three meadows located within Marine Protected Areas in the Ligurian Sea. Samplings were carried out in two distinct periods, at the beginning and at the end of the summer season, in order to individuate early changes in the epiphyte community structure. Differently from the descriptors commonly adopted for evaluating the health status of P. oceanica ecosystem, the epiphyte community structure was able to detect alterations in the water quality already after 4 months. The impacted meadows showed an immature epiphyte community characterised by large development of brown algae. Leaf P. oceanica epiphytes are, thus, proposed as appropriate biological quality elements (BQEs) able to show early responses to environmental alterations and they should be included in the monitoring programs for the conservation and the management of coastal areas.

Thermal anomalies up to 4 °C above the climatological mean caused dramatic mass mortalities in benthic ecosystems of the NW Mediterranean during the summer heat waves of 1999 and 2003. Information on the sessile communities of the submarine cave of Bergeggi (Ligurian Sea) was taken in 1986 and 2004, i.e. before and after the two thermal events, using wire-frame photography in four sectors of the cave ecosystem with different morphologies and environmental features. Percent cover data of growth forms (as descriptors of the structural aspects of cave ecosystem) and feeding guilds (functional aspects) were analysed by multivariate and univariate techniques. Differences in trophic organisation and total biotic cover in the four sectors were significant and consistent in the two years. Thus, food web constraints (such as water confinement and trophic depletion), that are mostly dependent on topography, underwent no major change following the thermal events. On the contrary, structural aspects changed across time, 3-dimensional growth forms being replaced by 2-dimensional ones, leading to a general homogenisation of the cave communities. Positive thermal anomalies are thought to have selectively killed erect and massive organisms, their replacement by encrusting organisms possibly representing a phase in cave recolonisation. Submarine caves are poorly resilient ecosystems, and understanding their capacity of recovery after major disturbances is mandatory for their management and conservation.

The endemic Mediterranean seagrass Posidonia oceanica is a key species in coastal waters and it is widely employed as an ideal biological indicator for assessing the quality of water bodies, in accordance to the Water Framework Directive (WFD), as well as for assessing the health status of coastal ecosystems. In this contribution the current situation of the P. oceanica monitoring programs in the Mediterranean Sea is reviewed focusing on those descriptors adopted commonly by researchers and local administrators. The application of recently introduced approaches based on a set of synthetic ecological indices, namely the Conservation Index (CI), the Substitution Index (SI) and the Phase Shift Index (PSI), is also reviewed discussing their effectiveness in the context of ecosystem health assessment and of the requirements of the WFD. The CI, the SI and the PSI go beyond the quality of the water and, thus, the WFD, as they provide additional indications on past events of disturbance that affected a meadow, on potentiality of a meadow to recover, on quality of sediments, on biological pollutants. An integrated approach based on the descriptors of the water quality together with the three ecological indices of the ecosystem health (CI, SI, and PSI) is thus recommended in order to discriminate the main components affecting the status of coastal ecosystems. Application of the CI, the SI and the PSI should be experienced in different areas of the Mediterranean Sea for selecting appropriate reference sites and for formulating more generalized classifications that shift the requirements of the WFD toward the perspective of the ecosystem health evaluation.

The performances of two commonly used non-destructive sampling procedures for rocky benthic assemblages (i.e. photography and visually assessed quadrats) were compared. A damaging human activity, date mussel (Lithophaga lithophaga) harvesting (DMH), was chosen. Directly impacted sites were compared with reference conditions (controls). Both visual quadrats and photography were equally able to detect differences between impacted situations and controls. However, visual quadrats showed high variability among replicates and estimated higher species richness for controls, while photography did so for impacts. Pooling photos in a ‘sum photo quadrat’ showed that differences between the two methods are due to sampling unit size rather than sampling procedure itself. As a small sampling unit is unavoidable with photography, visual quadrats should be preferred in investigating shallow rocky reefs for their larger size; however, longer working time underwater with quadrats does not allow for numerous replicates. Pooling many photos to reach sampling sizes comparable with those of quadrats may be a valid alternative to reconcile image resolution and areal coverage.

The key species Posidonia oceanica is the dominant endemic seagrass in the Mediterranean Sea and its meadows are considered as one of the most important and productive ecosystems in coastal waters. Covering the seabed from the surface down to about 40 m, meadows of P. oceanica are often affected by mechanical direct damages caused by boat anchoring and mooring activities. Negative effects of these activities have been shown to be recorded by P. oceanica at two different levels: the individual level (phenology of the plant) and the population level (structure of the meadow). We investigated the effect of an anchoring chain system on the P. oceanica meadow of Prelo cove (NW Mediterranean Sea) at two different depths (shallow, deep) and at three different situations of P. oceanica bottom cover (high, medium, low). Several standardized descriptors of the meadow health, working either at the individual or at the population level, were analysed in order to quantify the impact of the deployment of the chain system. A symmetrical BACI design was adopted to detect the impact, where multiple disturbed sites were contrasted with multiple controls in two distinct times, i.e. right few days after the chain settling (early) and 4 months later the disturbance (late). The anchoring chain system has been shown to strongly affect the meadow in terms of shoot density decline and rhizome baring, especially in the deep portions and where the cover of the meadow was low. All descriptors working at the population level proved effective in detecting the impact of the anchoring system. In contrast, descriptors working at the individual level did not show a consistent response to the impact. Our results pointed out the imperative necessity to proper regulate the boat anchoring and mooring activities on the P. oceanica meadows and the adoption of seagrass friendly mooring technology is thus recommended.

We investigated the conservation status and ecosystem substitution in six Posidonia oceanica (L.) Delile meadows in 2002 along 300 km of the Ligurian coast (NW Mediterranean Sea). We studied the meadows by scuba transects and we compared the meadows state of health through in situ shoot density counts and computing the Conservation Index (CI), the latter measuring the proportional amount of dead matte relative to live P. oceanica . Both measures evidenced a generalised state of regression for most of the six meadows. We also reported the occurrence, within the meadows, of the other common Mediterranean seagrass Cymodocea nodosa , the Mediterranean green alga Caulerpa prolifera , and the invasive green algae Caulerpa taxifolia and Caulerpa racemosa . We measured the replacement of P. oceanica by these species using the Substitution Index (SI), related to the proportional cover of each substitutes. These were ranked in order of their colonisation potential with respect to P. oceanica . We identified and measured a community “phase shift” occurring within the Mediterranean seagrass meadows using a combined index, the Phase-Shift Index (PSI). The analysis of the three environmental indices (CI, SI and PSI) at regional scale allowed to introduce three “regional” ordinal scales to classify the conservation status, the degree of substitution and the level of phase shift in P. oceanica meadows.