1. Identification of suitable mRNAs and microRNAs as reference genes for expression analyses in skin cells under sex hormone exposure
- Author
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Elisa Orlandi, Stefania Fochi, Maria Grazia Romanelli, Monica Rodolfo, Macarena Gomez-Lira, Elisabetta Vergani, Alberto Turco, and L. Ceccuzzi
- Subjects
keratinocytes ,0301 basic medicine ,reference genes ,Biology ,sex hormones ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,fibroblasts ,Reference genes ,microRNA ,Gene expression ,Genetics ,Humans ,RNA, Messenger ,Gonadal Steroid Hormones ,Gene ,Testosterone ,Skin ,miRNA ,Messenger RNA ,Gene Expression Profiling ,General Medicine ,Cell biology ,MicroRNAs ,HaCaT ,030104 developmental biology ,030220 oncology & carcinogenesis ,melanoma cells ,Hormone - Abstract
Quantitative RT-PCR is the most accurate technique for the study of gene expression profiles, however, to ensure the accuracy of qPCR results, suitable reference genes are necessary for data normalization. Hormones influence the development and function of skin cells, regulating the expression of genes and miRNAs. Nevertheless, the stability of reference genes after sex hormone treatment has not been thoroughly investigated. In this study, we evaluated the expression of a set of candidate mRNAs and microRNsA (miRNA) as reference genes in keratinocytes (HaCaT cells), primary human fibroblasts and a melanoma cell line (LM-36 cells) under testosterone or 17β-estradiol treatment. Two algorithms, namely geNorm, Best-Keeper, and the comparative ΔCt method were used to evaluate the expression stability of the candidate reference genes. The comprehensive ranking showed that TBP and miR-191-5p are the most stable expressed genes across all cultured cells under hormone treatment. Furthermore, we observed that GAPDH, HPRT1 and U6 snRNA expression may be altered by hormone exposure, thus, these genes are not recommended as reference genes. In conclusion, the present study provides, to the best of our knowledge, the first evaluation of expressed mRNA(s) and miRNA(s) as reference genes in three different types of skin cells under the stimulation of sex hormones.
- Published
- 2021
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