1. Evaluation of FGF 20 variants for susceptibility to Parkinson’s disease in Eastern Indians
- Author
-
Jharna Ray, Soumitra Ghosh, Shyamal Kumar Das, Gautami Das, Kunal Ray, Dipanwita Sadhukhan, and Arindam Biswas
- Subjects
Adult ,Male ,0301 basic medicine ,medicine.medical_specialty ,Parkinson's disease ,FGF20 ,India ,Single-nucleotide polymorphism ,Biology ,Fibroblast growth factor ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,Gene Frequency ,Risk Factors ,Internal medicine ,Genotype ,medicine ,Humans ,Genetic Predisposition to Disease ,Allele ,3' Untranslated Regions ,General Neuroscience ,Haplotype ,Dopaminergic ,Genetic Variation ,Parkinson Disease ,Middle Aged ,medicine.disease ,Fibroblast Growth Factors ,030104 developmental biology ,Endocrinology ,Haplotypes ,Female ,030217 neurology & neurosurgery - Abstract
Background Parkinson’s disease (PD) is the second most common neurodegenerative disease and has a complex etiology. Single nucleotide polymorphisms in the 3′-untranslated region of Fibroblast growth factor 20 (FGF 20) have been reported to be associated with PD; however, the results are controversial. Although FGF20 enhances the survival of dopaminergic neurons, it may also result in PD susceptibility by altering alpha-synuclein expression. Materials and methods To identify and characterize genetic risk variants in FGF 20 in Eastern Indian PD patients, 2 SNPs of FGF 20 (rs1721100 and rs2720208) were genotyped in 336 PD cases and 313 ethnically matched controls by PCR-RFLP. Results We observed statistically significant differences in genotypic and allelic frequencies of rs1721100 between PD cases and controls but not for rs12720208. Haplotype G-C showed a significant protective effect against PD. A functional assay revealed that the risk allele C at rs1721100 has little or no effect on relative luciferase activity from a reporter construct in the presence of miR-3189-3p, whereas allele G results in significant dose-dependent reduction. Conclusion Our results suggest that FGF 20 is a susceptibility gene for PD in Eastern Indians.
- Published
- 2018
- Full Text
- View/download PDF