1. Development of novel affinity reagents for detecting protein tyrosine phosphorylation based on superbinder SH2 domain in tumor cells
- Author
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Andong Liu, Yue-Qi Yu, Dan-ni Luo, Jia-Ying Liu, Hui Xu, Xuan Cao, Ya-nan Gao, Zhao-feng Li, and Ai-Qing Ke
- Subjects
0301 basic medicine ,Green Fluorescent Proteins ,Immunoblotting ,Fluorescent Antibody Technique ,Arginine ,SH2 domain ,Biochemistry ,Analytical Chemistry ,src Homology Domains ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Affinity Reagent ,Cell Line, Tumor ,Neoplasms ,Humans ,Environmental Chemistry ,Protein phosphorylation ,Phosphorylation ,Spectroscopy ,Chemistry ,Optical Imaging ,Phosphoproteomics ,Tyrosine phosphorylation ,src-Family Kinases ,030104 developmental biology ,Microscopy, Fluorescence ,030220 oncology & carcinogenesis ,Cancer cell ,Tyrosine ,Cancer biomarkers ,Proto-oncogene tyrosine-protein kinase Src - Abstract
Tyrosine phosphorylation, as a hallmark in cellular signal transduction, is important for a diverse array of cellular processes, such as proliferation, metabolism, motility, and survival. Aberrant tyrosine phosphorylation plays a causal role in many diseases, especially the cancer. Detecting protein phosphorylation status in the cancer cells or tissues is vital for assessing the pathological phase, discovering the cancer biomarkers, and identifying the drug targets. However, the common biochemical detection methods remain through anti-pTyr antibodies, which are known to have limited sensitivity, poor reproducibility and high cost. Recent studies have proved that superbinder SH2 domain is a good replacement of anti-pTyr antibodies for the specific enrichment of pTyr peptides in phosphoproteomics analysis. In this work, we exploited a series of affinity reagents based on superbinder SH2 derived from Src protein for detecting the pTyr-containing proteins to replace anti-pY antibodies in immunoblotting and immunofluorescence techniques. The excellent performance of HRP-sSH2 and EGFP-sSH2 was verified by the analysis of several different tumor cell samples and was compared with most commonly used commercial antibodies. EGFP-sSH2-(Arg)9 might be applied as the probe for direct fluorescence imaging in live cells via efficiently penetrating cell membranes and specifically binding with pTyr proteins. In summary, we have developed three novel, convenient, sensitive, and cost-effective affinity reagents that would have wide applications in protein tyrosine phosphorylation analysis for the tumor research and clinical diagnosis.
- Published
- 2018
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