1. Structures of three different neutral polysaccharides of Acinetobacter baumannii, NIPH190, NIPH201, and NIPH615, assigned to K30, K45, and K48 capsule types, respectively, based on capsule biosynthesis gene clusters
- Author
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Yuriy A. Knirel, Nikolay V. Volozhantsev, Johanna J. Kenyon, Konstantin A. Miroshnikov, Alexander S. Shashkov, Anastasiya V. Popova, Mikhail M. Shneider, and Nikolay P. Arbatsky
- Subjects
Acinetobacter baumannii ,060102 Bioinformatics ,Magnetic Resonance Spectroscopy ,Molecular Sequence Data ,Gene Expression ,Locus (genetics) ,Polysaccharide ,Biochemistry ,060199 Biochemistry and Cell Biology not elsewhere classified ,Analytical Chemistry ,060501 Bacteriology ,Bacterial Proteins ,Polysaccharide gene cluster ,Gene cluster ,Glycosyltransferase ,Humans ,Monosaccharide ,Gene ,Bacterial Capsules ,chemistry.chemical_classification ,Antigens, Bacterial ,biology ,060503 Microbial Genetics ,Polysaccharides, Bacterial ,K locus ,Organic Chemistry ,Glycosyltransferases ,060500 MICROBIOLOGY ,General Medicine ,Oligosaccharide ,biology.organism_classification ,Capsular polysaccharide structure ,Carbohydrate Sequence ,chemistry ,Genetic Loci ,Multigene Family ,biology.protein ,Acinetobacter Infections - Abstract
Neutral capsular polysaccharides (CPSs) were isolated from Acinetobacter baumannii NIPH190, NIPH201, and NIPH615. The CPSs were found to contain common monosaccharides only and to be branched with a side-chain 1→3-linked β-d-glucopyranose residue. Structures of the oligosaccharide repeat units (K units) of the CPSs were elucidated by 1D and 2D (1)H and (13)C NMR spectroscopy. Novel CPS biosynthesis gene clusters, designated KL30, KL45, and KL48, were found at the K locus in the genome sequences of NIPH190, NIPH201, and NIPH615, respectively. The genetic content of each gene cluster correlated with the structure of the CPS unit established, and therefore, the capsular types of the strains studied were designated as K30, K45, and K48, respectively. The initiating sugar of each K unit was predicted, and glycosyltransferases encoded by each gene cluster were assigned to the formation of the linkages between sugars in the corresponding K unit.
- Published
- 2015
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