1. AlGaN/GaN high electron mobility transistors for protein–peptide binding affinity study
- Author
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Yu-Fen Huang, Jen-Inn Chyi, Yu-Lin Wang, Fan Ren, Chih-Cheng Huang, Chen Pin Hsu, You Ren Hsu, Da-Jeng Yao, Chihchen Chen, Sheng-Shian Li, Geng Yen Lee, Hui-Teng Cheng, Chia-Hsien Hsu, J. Andrew Yeh, and Yuh-Chang Sun
- Subjects
Conductometry ,Transistors, Electronic ,Biomedical Engineering ,Biophysics ,Analytical chemistry ,Peptide ,Peptide binding ,Gallium ,Biosensing Techniques ,Sensitivity and Specificity ,Article ,Antibodies ,GaN ,Electron Transport ,High electron mobility transistors ,Protein Interaction Mapping ,Electrochemistry ,Binding site ,Aluminum Compounds ,chemistry.chemical_classification ,Detection limit ,Immunoassay ,Binding Sites ,Sensors ,Reproducibility of Results ,General Medicine ,Equipment Design ,Ligand (biochemistry) ,Electron transport chain ,Dissociation constant ,Equipment Failure Analysis ,Binding affinity ,chemistry ,Dissociation constants ,Peptides ,Biosensor ,Biotechnology ,Protein Binding - Abstract
Antibody-immobilized AlGaN/GaN high electron mobility transistors (HEMTs) were used to detect a short peptide consisting of 20 amino acids. One-binding-site model and two-binding-site model were used for the analysis of the electrical signals, revealing the number of binding sites on an antibody and the dissociation constants between the antibody and the short peptide. In the binding-site models, the surface coverage ratio of the short peptide on the sensor surface is relevant to the electrical signals resulted from the peptide–antibody binding on the HEMTs. Two binding sites on an antibody were observed and two dissociation constants, 4.404×10−11 M and 1.596×10−9 M, were extracted from the binding-site model through the analysis of the surface coverage ratio of the short peptide on the sensor surface. We have also shown that the conventional method to extract the dissociation constant from the linear regression of curve-fitting with Langmuir isotherm equation may lead to an incorrect information if the receptor has more than one binding site for the ligand. The limit of detection (LOD) of the sensor observed in the experimental result (∼10 pM of the short peptide) is very close to the LOD (around 2.7–3.4 pM) predicted from the value of the smallest dissociation constants. The sensitivity of the sensor is not only dependent on the transistors, but also highly relies on the affinity of the ligand-receptor pair. The results demonstrate that the AlGaN/GaN HEMTs cannot only be used for biosensors, but also for the biological affinity study., Highlights ► AlGaN/GaN high electron mobility transistors detected a short peptide. ► Antibody immobilized on transistors bind the peptide to form a complex. ► Binding affinity of the complex was studied using binding-site models. ► Dissociation constants and the number of binding sites were revealed.
- Published
- 2012