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• Novel impedimetric sensor was developed for detection of loop mediated isothermal amplification amplicons of pathogens. • A microfluidic system combined with magnetic separation was applied to construct an impedimetric sensor. • The impedimetric sensor possesses excellent sensing performance, which achieves a low detection limit of 10 copies. A novel impedimetric sensor was developed for the detection of loop mediated isothermal amplification (LAMP) amplicons of various foodborne pathogens through combining with a microfluidic system and magnetic separation procedure. The amplified nucleic acid products (amplicons) of the LAMP reaction can adsorb on magnetic beads surface via electrostatic adsorption process. The obtained nucleic acid-magnetic bead composites were re-dispersed in deionized water and the impedance response was measured by injecting the nucleic acid-magnetic bead composites into the microfluidic system. On account of the quite low conductivity (1˜2 μS cm―1) of deionized water, the weak change of charge can be detected by impedance. Thus the abundant negative charges of nucleic acids in the composites can produce an obviously reduction of impedance signal. Based on the principle, the developed impedimetric sensing method was used for sensing various foodborne pathogens including Escherichia coli O157:H7 (E. coli O157:H7), Vibrio parahaemolyticus (V. parahaemolyticus), Staphylococcus aureus (S. aureus), and Listeria monocytogenes (L. monocytogenes), which achieved a low detection limit (10 copies). Compared with the conventional gel electrophoresis method, our method is more sensitive and faster, which has a potential for fast and sensitive detection of the LAMP products of various targets. [ABSTRACT FROM AUTHOR]