21 results on '"Babu, Phanithi Prakash"'
Search Results
2. pDok2, caspase 3 dependent glioma cell growth arrest by nitidine chloride
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Deshpande, Ravindra Pramod and Babu, Phanithi Prakash
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- 2018
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3. Brainstem glioma: Clinical significance and prognostic evaluation
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Deshpande, Ravindra Pramod, Chandrasekhar, Y.B.V.K., Babu, Deepak, Satish Rao, I., Panigrahi, Manas, and Babu, Phanithi Prakash
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- 2019
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4. c-Jun N terminal kinases (JNK) are activated in the brain during the pathology of experimental cerebral malaria
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Anand, Sripada Santosh and Babu, Phanithi Prakash
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CEREBRAL malaria , *JNK mitogen-activated protein kinases , *NEURODEGENERATION , *PLASMODIUM , *CELL death , *CELLULAR mechanics , *PHOSPHORYLATION , *NEURAL stem cells , *PATIENTS - Abstract
Abstract: Experimental cerebral malaria (ECM) resulting from Plasmodium berghei ANKA (PbA) infection in C57BL/6J mice manifests cell death in the brain. However, the precise molecular and biochemical mechanisms regulating cell death during ECM remains unknown. In this study we have examined, the role of a stress activated protein kinase called c-Jun N terminal kinase during the pathology of ECM. We report in this study, for the first time the activation of all key elements in the JNK pathway like p-MKK4, p-JNK and p-c-Jun in mouse brain during ECM. Concomitant with such activation was the up regulation of p-JNK and its translocation into the nucleus leading to the phosphorylation of its major substrate c-Jun. These observations show the neuronal induction of p-JNK and its critical role as a mediator in neuronal cell death during ECM. [ABSTRACT FROM AUTHOR]
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- 2011
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5. Multiple apoptogenic proteins are involved in the nuclear translocation of Apoptosis Inducing Factor during transient focal cerebral ischemia in rat
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Chaitanya, Ganta Vijay and Babu, Phanithi Prakash
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APOPTOSIS , *PROTEINS , *CEREBRAL ischemia , *LABORATORY rats , *CALPAIN , *RNA polymerases - Abstract
Abstract: Apoptosis Inducing Factor is a mitochondrial protein which upon translocation to nucleus causes large scale DNA fragmentation. The stimulus for the cytosolic release and nuclear translocation for this protein still remains to be understood. The role of calpains, cathepsin-b, Poly ADP (ribose) Polymerase and granzyme-b in the nuclear translocation of AIF has been investigated in the pathology of cerebral ischemia. Calpains, cathepsin-b and PARP-1 which were mostly confined to cytosol, lysosomes and nucleus respectively were found to be elevated in the mitochondrial fraction interacting with AIF in the western blot analysis and double immunofluorescence analysis. Western blot and immunohistochemical analysis revealed elevated levels of granzyme-b secreted by cytotoxic T lymphocytes and natural killer cells in the infarct of ischemic mouse brain. Co-immunoprecipitation revealed and western blot analysis the interaction and break down of Heat Shock Protein-70 an endogenous inhibitor of AIF into signature fragments by granzyme-b facilitating the nuclear translocation of AIF. Break down of HSP-70 correlated with the nuclear translocation of AIF observed in western and immunohistochemical analysis. These results indicate that multiple proteases were involved in the nuclear translocation of AIF during the pathology of cerebral ischemia. [Copyright &y& Elsevier]
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- 2008
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6. Ethanol-induced alteration in N-methyl-d-aspartate receptor 2A C-terminus and protein kinase C activity in rat brain
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Sultana, Rukhsana and Babu, Phanithi Prakash
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ALCOHOL , *METHANOL , *PHOSPHORYLATION , *CEREBRAL cortex - Abstract
Ethanol is a potent inhibitor of the N-methyl-d-aspartate (NMDA) subtype of glutamate receptor. In the present study, expression of NR2A and its phosphorylation status were investigated in adult rat cerebral cortex and cerebellum, using an experimental paradigm of in vivo chronic ethanol exposure. In addition, PKC activity was measured in both cytosol and membrane fraction of cerebral cortex and cerebellum using Histone III S as substrate. Western blot analysis using NR2A antibody showed an increased immunoreactivity in cerebral cortex and no immunoreactivity in cerebellum of alcohol-treated rats. Furthermore, PKC activity was increased in both membrane and cytosolic fraction of alcohol-treated rat cerebellum, whereas PKC activity in cerebral cortex was found to be decreased in membrane fraction with no appreciable change in cytosolic fraction. In vitro phosphorylation study showed hypophosphorylation in ethanol-treated cerebral cortex and cerebellum. Our current findings imply that the truncation of NR2A subunit upon alcohol administration in cerebellum probably contributes to altered NMDA receptor function and cerebellar atrophy and motor incoordination in alcoholic rats. [Copyright &y& Elsevier]
- Published
- 2003
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7. CaM kinase II-alpha activity, levels and Ca/calmodulin dependent phosphorylation of substrate proteins in mice brain during fatal murine cerebral malaria
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Kumar, Kota Arun and Babu, Phanithi Prakash
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CEREBRAL malaria , *TUMOR necrosis factors , *CALPAIN , *APOPTOSIS - Abstract
The activity and levels of CaM kinase II-alpha was investigated in the cytosolic and membrane fraction of mice cerebral cortex and cerebellum using an experimental model of fatal murine cerebral malaria (FMCM). In parallel, Ca2+/Calmodulin dependent phosphorylation of target substrate proteins was studied using syntide-2 as substrate. Pathology of FMCM resulted in decreased CaM kinase-II activity in both cortex and cerebellum though western analysis revealed no appreciable changes in the levels of CaM kinase-II alpha in cytosol and membrane fractions from control and cerebral malaria infected brain. Given the abundant expression of Cam kinase-II in neuronal tissue, its significance in neurotransmitter release and synthesis and signal transduction during apoptosis, decreased levels of enzyme activity and altered phosphorylation of substrate proteins by CaM kinase II may serve as important cues in understanding the CaM kinase signal transduction events central to neurological disorders during FMCM. [Copyright &y& Elsevier]
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- 2003
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8. Mitochondrial anomalies are associated with the induction of intrinsic cell death proteins-Bcl2, Bax, cytochrome-c and p53 in mice brain during experimental fatal murine cerebral malaria
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Kumar, Kota Arun and Babu, Phanithi Prakash
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APOPTOSIS , *CEREBRAL cortex , *CEREBELLUM , *MICE - Abstract
The levels of apoptosis associated proteins Bcl2, Bax, cytochrome-c and p53 was investigated in mice cerebral cortex and cerebellum, using an experimental model of fatal murine cerebral malaria (FMCM). Owing to the activation of events central to mitochondrial dysfunctions, we monitored the structural integrity of mitochondria in cerebral malaria (CM) infected brain tissue by transmission EM (TEM) studies. Western blot analysis revealed the induction of Bcl2, Bax, cytochrome-c and p53 in both cortex and cerebellum. The TEM studies revealed extensive vacuolation and swelling of mitochondria in infected brain suggestive of a late stage of degeneration. Our results underscore the activation of an intrinsic cell death pathway as evinced by the induction of mitochondria associated apoptotic proteins Bcl2, Bax and cytochrome-c and further envisages the induction of p53 as a possible continuation of the post receptor signaling events associated with tumor necrosis factor induction following inflammatory responses during CM. These findings may be crucial to mitochondrial dysfunctions underlying the pathology of FMCM. [Copyright &y& Elsevier]
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- 2002
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9. AMP-activated protein kinase (AMPK) is decreased in the mouse brain during experimental cerebral malaria.
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Apoorv, Thittayil Suresh, Karthik, Chintanuri, and Babu, Phanithi Prakash
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PLASMODIUM berghei , *CEREBRAL malaria , *PLASMODIUM falciparum , *ERYTHROCYTES , *GLYCOGEN - Abstract
Cerebral malaria (CM) is a severe form of malaria caused by Plasmodium falciparum and P.vivax. CM affects the brain leading to coma and is the leading cause of death in malaria patients. The enzyme, adenosine 5′-monophosphate-activated protein kinase (AMPK), is an important metabolic sensor that helps in maintaining energy homeostasis during normal physiological as well as pathological conditions. In the present study, we studied the status of AMPK in the mouse model of CM. The C57BL/6 mice infected by rodent-specific P.berghei ANKA were used for the study. We found a statistically significant reduction in the gene expressions of Prkaa1 (α1 subunit) and Prkaa2 (α2 subunit) in the brains of CM mice compared to uninfected control. Also, there was a statistically significant reduction in the ratio of phospho-AMPK/AMPK protein levels in CM compared to uninfected control. There was no statistically significant decrease in phospho-ACC/ACC ratio in the brain compared to control. As AMPK is downregulated in CM, there is a possible involvement in neuronal cell death during CM pathogenesis, and therefore we feel that novel AMPK activating drugs might be helpful as an adjunctive therapy for conferring neuroprotection. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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10. Proteolytic breakdown of cytoskeleton induces neurodegeneration during pathology of murine cerebral malaria
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Eeka, Prabhakar, Chaitanya, Ganta Vijay, and Babu, Phanithi Prakash
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CEREBRAL malaria , *CYTOPLASMIC filaments , *PROTEOLYTIC enzymes , *CYTOSKELETON , *NEURODEGENERATION , *CYTOSKELETAL proteins , *CELL death - Abstract
Abstract: Fatal murine cerebral malaria is known to induce cellular degeneration by altering cellular morphology and integrity of cell. The morphology and integrity of the cell mainly depends on the cytoskeletal network of the cell. Increased proteolysis of cytoskeletal proteins accompanied by aggravated suicidal proteases activation leads to cellular degeneration. In the present study, we investigated the roles of apoptotic and necrotic cell death proteases, caspase-3, calpain-1 and cathepsin-b in the proteolysis of neuronal cytoskeletal proteins in mouse model of fatal cerebral malaria. We found increased levels of calpain-1, cathepsin-b and caspase-3, with extensive cross talks between these suicidal proteases. Increased levels of these proteases correlated with the enhanced proteolysis of several cytoskeletal proteins including neuronal cytoskeleton proteolytic signature fragments. Further, we also observed that increased levels of these proteases correlated with the appearance of neuronal death that exhibited apo-necrotic continuum. Our results confirm that activation of multiple suicidal proteases, their cross talks and breakdown of the cytoskeletal proteins increase neuronal degeneration and lead to exacerbation of cerebral malaria pathology. [Copyright &y& Elsevier]
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- 2011
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11. Activation of calpains, calpastatin and spectrin cleavage in the brain during the pathology of fatal murine cerebral malaria
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Shukla, Meena, Rajgopal, Yadavalli, and Babu, Phanithi Prakash
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MALARIA , *MEMBRANE proteins , *CEREBRAL cortex , *NEURODEGENERATION - Abstract
Abstract: Neuronal calpains appear to be activated uncontrollably by sustained elevation of cytosolic calcium levels under pathological conditions as well as neurodegenerative diseases. In the present study, we have characterized calpain activation in cytosolic extract of mice cerebral cortex and cerebellum using an experimental model of fatal murine cerebral malaria (FMCM). Pathology of FMCM resulted in the increase in activity of calpains in both cerebral cortex and cerebellum. Western blot analysis revealed an increase in the levels of μ-calpain (calpain-1) in the cytosolic fraction of infected cerebral cortex and cerebellum although a decrease in the level of m-calpain was observed in the cytosolic fraction of infected cerebellum and cerebral cortex. Calpain activation was further confirmed by monitoring the formation of calpain-specific spectrin breakdown products (SBDP). Protease-specific SBDP revealed the formation of calpain-generated 150kDa product in the infected cerebral cortex and cerebellum. The specific signature fragment of calpain activation and spectrin breakdown after Plasmodium berghei ANKA infection provide a strong evidence of the role of calpains during the cell death in cerebral cortex and cerebellum. Given the role of calpains in neurodegeneration and cell death, our results strongly suggest that calpains are important mediators of cell injury and neurological sequelae associated with FMCM. [Copyright &y& Elsevier]
- Published
- 2006
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12. Molecular targets in cerebral malaria for developing novel therapeutic strategies.
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Vanka, Ravisankar, Nakka, Venkata Prasuja, Kumar, Simhadri Praveen, Baruah, Uday Krishna, and Babu, Phanithi Prakash
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CEREBRAL malaria , *PATHOLOGY , *BLOOD parasites , *COGNITION disorders , *CELL death - Abstract
• Elevated levels of pro-inflammatory cytokines and oxidative free radicals contribute to neuropathology in cerebral malaria. • Adjunctive anti-malarial therapy is essential for reducing the cognitive deficits for cerebral malaria. • Adjunctives targeting early pathological events must be studied in the animal models of cerebral malaria. Cerebral malaria (CM) is the severe neurological complication associated with Plasmodium falciparum infection. In clinical settings CM is predominantly characterized by fever, epileptic seizures, and asexual forms of parasite on blood smears, coma and even death. Cognitive impairment in the children and adults even after survival is one of the striking consequences of CM. Poor diagnosis often leads to inappropriate malaria therapy which in turn progress into a severe form of disease. Activation of multiple cell death pathways such as Inflammation, oxidative stress, apoptosis and disruption of blood brain barrier (BBB) plays critical role in the pathogenesis of CM and secondary brain damage. Thus, understanding such mechanisms of neuronal cell death might help to identify potential molecular targets for CM. Mitigation strategies for mortality rate and long-term cognitive deficits caused by existing anti-malarial drugs still remains a valid research question to ask. In this review, we discuss in detail about critical neuronal cell death mechanisms and the overall significance of adjunctive therapy with recent trends, which provides better insight towards establishing newer therapeutic strategies for CM. [ABSTRACT FROM AUTHOR]
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- 2020
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13. Synthesis of pyrazolo[3,4-d]pyrimidin-4(5H)-ones tethered to 1,2,3-triazoles and their evaluation as potential anticancer agents.
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Allam, Muralidhar, Bhavani, A.K.D., Mudiraj, Anwita, Ranjan, Nikhil, Thippana, Mallikarjuna, and Babu, Phanithi Prakash
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ANTINEOPLASTIC agents , *TRIAZOLES , *CELL cycle , *DRUGS , *AZOLES - Abstract
A series of hybrid aza heterocycles containing pyrazolo[3,4-d]pyrimidin-4(5 H )-ones tethered to 1,2,3-triazole scaffold were synthesized from 1,3-dipolar cycloaddition reaction of pyrazolopyrimidinone based alkyne with azides using Cu(II) catalyst in presence of sodium ascorbate and evaluated for their anticancer efficacy in vitro against C6 rat and U87 human glioma cell lines. These compounds induced a concentration dependent inhibition of C6 rat and U87 human glioma cell proliferation. Compound 5f arrested the cells at S -phase of the cell cycle and induced apoptosis in U87 GBM cell lines. Further, apoptosis was evidenced by the cleavage of Caspase-3, PARP and up regulation of p53. In silico docking studies reveal that the compounds 5a, 5f and 5l were more effective in binding with TGFBR2 than other compounds. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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14. ERK1/2 activated PHLPP1 induces skeletal muscle ER stress through the inhibition of a novel substrate AMPK.
- Author
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Behera, Soma, Kapadia, Bandish, Kain, Vasundhara, Alamuru-Yellapragada, Neeraja P., Murunikkara, Vachana, Kumar, Sireesh T., Babu, Phanithi Prakash, Seshadri, Sriram, Shivarudraiah, Prasad, Hiriyan, Jagadheshan, Gangula, Narmadha Reddy, Maddika, Subbareddy, Misra, Parimal, and Parsa, Kishore V.l.
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SKELETAL muscle , *INFLAMMATION , *DYSLIPIDEMIA , *ENDOPLASMIC reticulum , *INSULIN - Abstract
Nutritional abundance associated with chronic inflammation and dyslipidemia impairs the functioning of endoplasmic reticulum (ER) thereby hampering cellular responses to insulin. PHLPP1 was identified as a phosphatase which inactivates Akt, the master regulator of insulin mediated glucose homeostasis. Given the suggestive role of PHLPP1 phosphatase in terminating insulin signalling pathways, deeper insights into its functional role in inducing insulin resistance are warranted. Here, we show that PHLPP1 expression is enhanced in skeletal muscle of insulin resistant rodents which also displayed ER stress, an important mediator of insulin resistance. Using cultured cells and PHLPP1 knockdown mice, we demonstrate that PHLPP1 facilitates the development of ER stress. Importantly, shRNA mediated ablation of PHLPP1 significantly improved glucose clearance from systemic circulation with enhanced expression of glucose transporter 4 (GLUT-4) in skeletal muscle. Mechanistically, we show that endogenous PHLPP1 but not PP2Cα interacts with and directly dephosphorylates AMPK Thr 172 in myoblasts without influencing its upstream kinase, LKB1. While the association between endogenous PHLPP1 and AMPK was enhanced in ER stressed cultured cells and soleus muscle of high fat diet fed mice, the basal interaction between PP2Ac and AMPK was minimally altered. Further, we show that PHLPP1α is phosphorylated by ERK1/2 at Ser 932 under ER stress which is required for its ability to interact with and dephosphorylate AMPK and thereby induce ER stress. Taken together, our data position PHLPP1 as a key regulator of ER stress. [ABSTRACT FROM AUTHOR]
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- 2018
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15. MicroRNA-712 restrains macrophage pro-inflammatory responses by targeting LRRK2 leading to restoration of insulin stimulated glucose uptake by myoblasts.
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Talari, Malathi, Nayak, Tapan Kumar Singh, Kain, Vasundhara, Babu, Phanithi Prakash, Misra, Parimal, and Parsa, Kishore V.L.
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MICRORNA , *MYOBLASTS , *NEURODEGENERATION , *INSULIN resistance , *GENE regulatory networks - Abstract
Chronic inflammatory diseases such as insulin resistance, Type 2 diabetes, neurodegenerative diseases etc., are shown to be caused due to imbalanced activation states of macrophages. MicroRNAs which are transcriptional/post-transcriptional regulators of gene expression drive several pathophysiological processes including macrophage polarization. However the functional role of microRNAs in regulating inflammation induced insulin resistance is ill defined. In our current study we observed that the expression of miR-712 was reduced in macrophages exposed to LPS and IFN-γ. Ectopic expression of miR-712 in RAW 264.7 mouse macrophages impaired the expression of iNOS protein and secretion of pro-inflammatory cytokines such as TNF-α, IL-6 and IFN-β which in turn led to improved insulin stimulated glucose uptake in co-cultured L6 myoblasts. Mechanistically, we identified that miR-712 targets the 3′UTR of a potent inflammatory gene LRRK2 and dampens the phosphorylation of p38 and ERK1/2 kinases. Taken together, our data underscore the regulatory role of miR-712 in restoring insulin stimulated glucose uptake by myoblasts through down-regulating macrophage mediated inflammatory responses. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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16. New class of fused [3,2-b][1,2,4]triazolothiazoles for targeting glioma in vitro.
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Venkatesham, Papisetti, Ranjan, Nikhil, Mudiraj, Anwita, Kuchana, Vinutha, Chedupaka, Raju, Manga, Vijjulatha, Babu, Phanithi Prakash, and Vedula, Rajeswar Rao
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GLIOMAS , *MITOGEN-activated protein kinases , *PHTHALIC anhydride , *SCHIFF bases , *CELL cycle - Abstract
[Display omitted] • Synthesis of fused triazolothiazole isoindolines and schiff bases. • Anti-cancer activity of target compounds using glioma cell lines. • MAP kinase pathway study. • Molecular docking 2D&3D diagrammatic representation of active compounds. • X-ray crystal structural analysis. Glioma is aggressive malignant tumor with limited therapeutic interventions. Herein we report the synthesis of fused bicyclic 1,2,4-triazolothiazoles by a one-pot multi-component approach and their activity against C6 rat and LN18 human glioma cell lines. The target compounds 2-(6-phenylthiazolo[3,2–b][1,2,4]triazol-2-yl) isoindoline-1,3-diones and (E)-1-phenyl-N-(6-phenylthiazolo[3,2–b][1,2,4]triazol-2-yl) methanimines were obtained by the reaction of 5-amino-4H-1,2,4-triazole-3-thiol with substituted phenacyl bromide, phthalic anhydride, and different aromatic aldehydes in EtOH/HCl under reflux conditions. In C6 rat glioma cell lines, compounds 4g and 6i showed good cytotoxic activity with IC 50 values of 8.09 and 8.74 μM, respectively, resulting in G1 and G2-M phase arrest of the cell cycle and activation of apoptosis by modulating phosphorylation of ERK and AKT pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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17. Concise total synthesis of water soluble metatacarboline A, C, D, E and F and its anticancer activity.
- Author
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Naveen, Badher, Mudiraj, Anwita, Khamushavalli, Geeviman, Babu, Phanithi Prakash, and Nagarajan, Rajagopal
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CARBOLINES , *HETEROCYCLIC compounds , *CHEMICAL synthesis , *ANTINEOPLASTIC agents , *GLIOMAS , *ALKALOIDS - Abstract
The simple, concise, protecting group free and first total synthesis of Metatacarboline alkaloids (abbreviated as Mc) Mc A, C, D, E and F are reported. The core structure of metatacarboline alkaloids has been constructed by the classical Wittig reaction as key step from easily accessible starting materials with 40–75% overall yields. These synthesized compounds have been subjected to evaluate for their anticancer activity using C6 glioma cell lines. Mc D and Mc F showed significant antiproliferative activity, which was confirmed by MTT and Clonogenic assay. FACS analysis showed that Mc D and Mc F arrested the cell cycle at sub G0/G1 and G2/M phase of cell cycle respectively. Further, Western blot analysis and immunohistochemistry of Mc D treated cells revealed activation of caspase dependent downstream signaling which led to apoptosis. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
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18. Activation of Wnt/β-catenin/Tcf signaling pathway in human astrocytomas
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Sareddy, Gangadhara Reddy, Panigrahi, Manas, Challa, Sundaram, Mahadevan, Anita, and Babu, Phanithi Prakash
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CELLULAR signal transduction , *PROTEINS , *ASTROCYTOMAS , *REVERSE transcriptase polymerase chain reaction , *WESTERN immunoblotting , *BRAIN tumors , *NEUROCHEMISTRY - Abstract
Abstract: Astrocytomas are the most common form of primary brain tumors. Understanding the molecular basis of development and progression of astrocytomas is required to develop more effective therapies. Although, over activation of Wnt/β-catenin/Tcf pathway is a hallmark of several forms of cancer, little is known about its role in human astrocytomas. Here, we report the evidence that Wnt/β-catenin/Tcf signaling pathway is constitutively activated in astrocytic tumors. In the present study, human astrocytic tumors with different clinical grades were analyzed for mRNA expression of Dvl-1, Dvl-2, Dvl-3, β-catenin, c-myc and cyclin D1 and protein levels of β-catenin, Lef1, Tcf4, c-Myc, N-Myc, c-jun and cyclin D1. RT-PCR analysis demonstrated the overexpression of Dvl-3, β-catenin, c-myc and cyclin D1 in astrocytomas. Western blotting revealed upregulation of β-catenin, Lef1, Tcf4 and their target proteins in the core tumor tissues in comparison to peritumor and normal brain tissues. The protein and mRNA levels were positively correlated with the histological malignancy. Cytoplasmic and nuclear accumulation of β-catenin, nuclear localization of Lef1, Tcf4, c-Myc, N-Myc, c-jun and cyclin D1 were demonstrated by immunohistochemical staining. Our studies tend to suggest that Wnt/β-catenin/Tcf signaling pathway is implicated in malignancy of astrocytomas. [Copyright &y& Elsevier]
- Published
- 2009
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19. Discovery of transcriptional programs in cerebral ischemia by in silico promoter analysis
- Author
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Ridder, Dirk A., Bulashevska, Svetlana, Chaitanya, Ganta Vijay, Babu, Phanithi Prakash, Brors, Benedikt, Eils, Roland, Schneider, Armin, and Schwaninger, Markus
- Subjects
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GENETIC transcription , *CEREBRAL ischemia , *NERVOUS system regeneration , *GENETIC regulation , *PROMOTERS (Genetics) , *COMPUTER simulation , *BINDING sites , *BIOINFORMATICS - Abstract
Abstract: In stroke, gene transcription plays a central role in processes such as neuroinflammation and neuroregeneration. To predict new transcriptional regulatory mechanisms in cerebral ischemia, we applied a computational approach combining two kinds of information: the results of a microarray analysis in a mouse model of stroke and in silico detection of transcription factor (TF) binding sites in promoter regions of the genes on the array. By using a discriminative logistic regression model, we identified binding sites significantly associated with the up-regulation of genes. Out of 356 TF binding sites defined in TRANSFAC, we could link 32 to gene up-regulation in cerebral ischemia. These sites bind both TFs with an established and a so far unknown role in cerebral ischemia. To evaluate the results further we investigated whether two TFs, CCAAT/enhancer binding protein β (C/EBPβ) and vitamin D receptor (VDR), are activated as predicted. Immunohistochemistry demonstrated that C/EBPβ and VDR translocated to the nucleus in cerebral ischemia. Chromatin immunoprecipitation revealed increased binding of C/EBPβ to the promoter of its target gene saa3. In addition, we found evidence for the up-regulation of VDR in brain samples from human stroke patients. These results confirm the activation of C/EBPβ and VDR in cerebral ischemia. Thus, our in silico analysis may provide additional information on transcriptional regulation in stroke and suggests several novel transcriptional programs for further exploration. [Copyright &y& Elsevier]
- Published
- 2009
- Full Text
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20. Formation of acetaldehyde adducts of glutathione S-transferase A3 in the liver of rats administered alcohol chronically
- Author
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Sultana, Rukhsana, Raju, Bhupanapadu Sunkesula Solomon, Sharma, Varsha, Reddanna, Pallu, and Babu, Phanithi Prakash
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GLUTATHIONE , *MASS spectrometry , *ACETALDEHYDE , *LABORATORY rats - Abstract
Abstract: Hepatic tissue damage induced by chronic exposure to alcohol is mediated through acetaldehyde and associated with reactive oxygen species, which impair cellular defense mechanisms. Because glutathione S-transferases (GSTs) play an important role in the detoxification of xenobiotics and reactive oxygen species, the current study was undertaken to test the effect of alcohol administration on structural and functional characteristics of rat (r) liver Alpha class rGSTs. Western blot analysis revealed an appreciable change in the expression of rGSTA3 subunit levels, whereas no change was observed in activity after chronic alcohol treatment. Reverse-phase high performance liquid chromatographic analysis of rat liver GSTs that were affinity purified with glutathione showed a 1.07-fold increase in rGSTA3 subunit levels in rats treated with alcohol chronically. In addition, liquid chromatographic–electrospray ionization mass spectrometric analysis of GSTs that were affinity purified with glutathione showed the formation of acetaldehyde adducts to the rGSTA3 subunit. Given the abundant expression of rGSTA3 subunit and acetaldehyde adduct formation, results of the current study support the suggestion that modification of rGSTA3 subunit, and thus its impaired function, in alcohol-exposed rats may contribute to the progression of alcohol-induced liver damage. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
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21. Activation of nuclear transcription factor-kappa B is associated with the induction of inhibitory kappa B kinase-beta and involves differential activation of protein kinase C and protein tyrosine kinases during fatal murine cerebral malaria
- Author
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Kumar, Kota Arun, Rajgopal, Yadavalli, Pillai, Usha, and Babu, Phanithi Prakash
- Subjects
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CEREBRAL malaria , *TUMOR necrosis factors - Abstract
The levels of nuclear transcription factor-kappa B (NF-κB) subunits p65 and p50 and its associated kinase, inhibitory kappa B kinase (IKK) alpha and beta were monitored in cytosolic and nuclear fraction of mice cerebral cortex and cerebellum using an experimental model of fatal murine cerebral malaria (FMCM). Since protein kinase C (PKC) and protein tyrosine kinases (PTK) are known to collaborately regulate the NF-κB activation, we also studied the activity of these two kinases in cytosol and membrane fraction. In parallel, the levels of two PKC isoforms (alpha and delta) and tyrosine phosphorylated proteins were monitored to correlate the observed changes in the activity. Our results underscore the involvement of IKK-beta as an essential mediator of NF-κB activation as evinced by the nuclear translocation of p65 and p50 during CM pathology. Additional findings confirm altered activity and levels of PKC and enhanced activation of PTK and tyrosine phosphorylation of proteins during CM pathology. These signaling intricacies involving an interplay between rel family (NF-κB) of transcription factors, PKC and PTK may serve as an important cue in understanding the possible continuation of the post receptor signaling events associated with tumor necrosis factor-alpha induction during FMCM pathology. [Copyright &y& Elsevier]
- Published
- 2003
- Full Text
- View/download PDF
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