1. The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study
- Author
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Eric J. Chow, Amanda M. Casto, Julia H. Rogers, Pavitra Roychoudhury, Peter D. Han, Hong Xie, Margaret G. Mills, Tien V. Nguyen, Brian Pfau, Sarah N. Cox, Caitlin R. Wolf, James P. Hughes, Timothy M. Uyeki, Melissa A. Rolfes, Emily Mosites, M. Mia Shim, Jeffrey S. Duchin, Nancy Sugg, Lea A. Starita, Janet A. Englund, and Helen Y. Chu
- Subjects
Human coronavirus ,Homeless shelters ,Respiratory viral infections ,Homelessness ,Public aspects of medicine ,RA1-1270 - Abstract
Summary: Background: The circulation of respiratory viruses poses a significant health risk among those residing in congregate settings. Data are limited on seasonal human coronavirus (HCoV) infections in homeless shelter settings. Methods: We analysed data from a clinical trial and SARS-CoV-2 surveillance study at 23 homeless shelter sites in King County, Washington between October 2019-May 2021. Eligible participants were shelter residents aged ≥3 months with acute respiratory illness. We collected enrolment data and nasal samples for respiratory virus testing using multiplex RT-PCR platform including HCoV. Beginning April 1, 2020, eligibility expanded to shelter residents and staff regardless of symptoms. HCoV species was determined by RT-PCR with species-specific primers, OpenArray assay or genomic sequencing for samples with an OpenArray relative cycle threshold
- Published
- 2022
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