46 results on '"Kimoto, M."'
Search Results
2. ACTIVE COMPONENT AND ITS ROLE FOR ABDOMINAL IRRADIATIOON-INDUCED INHIBITION OF LUNG METASTASIS (AIRIM)
- Author
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KIMOTO, M., primary, ANDO, K., additional, JIBU, T., additional, MATSUMOTO, T., additional, Koike, S., additional, and MORIYA, H., additional
- Published
- 1991
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3. An Analysis of T Cell Antigen Recognition Utilizing T Cell Clones
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Infante, A.J., primary, Kimoto, M., additional, and Fathman, C.G., additional
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- 1982
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4. FUNCTIONAL STUDIES OF IMMUNE RESPONSE UTILIZING MURINE T CELL CLONES
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Fathman, C.G., primary, Asano, Y., additional, Infante, A.J., additional, Shigeta, M., additional, Nelson, P., additional, Frelinger, J., additional, Kimoto, M., additional, Singer, A., additional, and Hodes, R., additional
- Published
- 1982
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5. Gait-related self-efficacy is directly associated with daily step counts in individuals with knee osteoarthritis.
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Okura K, Shibata K, Suda T, Kimoto M, Saito A, Wakasa M, Kimura Y, and Okada K
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- Humans, Cross-Sectional Studies, Gait, Knee Joint, Walking, Self Efficacy, Osteoarthritis, Knee complications
- Abstract
Background: In addition to physical factors, psychological factors such as self-efficacy (SE) reportedly affect physical activity (PA) levels in individuals with knee osteoarthritis (OA). However, the relationship between PA and SE for walking tasks in patients with knee OA remains unclear. The present study aimed to investigate the direct and indirect pathways of SE for walking tasks and the influence of previously reported factors on PA level in individuals with knee OA., Methods: A cross-sectional design was employed. Eighty-five individuals with knee OA were enrolled. The daily step count (Steps) was considered an objective level of PA. The SE for the walking task was assessed using a modified Gait Efficacy Scale (mGES). Data on gait speed (GS), the visual analog scale (VAS) score for knee pain, Kellgren-Lawrence (K-L) grade of radiographic severity of knee OA, age, and body mass index were collected. Path analysis was performed to investigate the direct and indirect effects of these variables on Steps., Results: After exclusion, 70 participants were included. The alternative model, which included Steps, mGES, GS, VAS, K-L grade, and age, showed a good fit. mGES and age had a direct effect on Steps (standardized path coefficients: 0.337 and -0.542, respectively), while the other variables had indirect effects., Conclusions: The SE for walking tasks was directly associated with Steps representative of the PA level. This finding suggests that SE for the walking task may be important in improving PA levels in individuals with knee OA., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2022
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6. A new indication and surgical procedure to reduce fat necrosis after breast-conserving surgery using an inframammary adipofascial flap.
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Yoshikawa M, Ishitobi M, Matsuda S, Kimoto M, Higashi C, Imai N, Noro A, Yamashita M, Hanamura N, and Ogawa T
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- Female, Humans, Mastectomy, Segmental methods, Middle Aged, Retrospective Studies, Surgical Flaps, Breast Neoplasms pathology, Carcinoma in Situ surgery, Fat Necrosis etiology, Fat Necrosis prevention & control, Fat Necrosis surgery, Mammaplasty methods
- Abstract
Background: There is little information on the risk factors for fat necrosis after breast-conserving surgery using an inframammary adipofascial flap (IAF)., Methods: We conducted a retrospective cohort study from a single institution evaluating the risk factors for fat necrosis after breast-conserving surgery using an IAF (n = 41) performed from 2005 to 2020 for newly diagnosed stage 0-2 breast cancer or phyllodes tumor., Results: Age (≥50 years of age vs. <50 years of age), mammographic density (fatty vs. other) and operation period (before vs. after revision of surgical procedure and patient indication) were significantly associated with fat necrosis (p = 0.006, p = 0.04 and p = 0.02, respectively)., Conclusion: Our study suggested that the use of an IAF with crescent dermis and selection of appropriate cases for IAF after breast-conserving surgery may be useful for the purpose of reducing fat necrosis. Further study is needed., (Copyright © 2022 Asian Surgical Association and Taiwan Robotic Surgery Association. Published by Elsevier B.V. All rights reserved.)
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- 2022
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7. Creation of unnatural base pairs for genetic alphabet expansion toward synthetic xenobiology.
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Hamashima K, Kimoto M, and Hirao I
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- Animals, Aptamers, Nucleotide genetics, Humans, Models, Molecular, Polymerase Chain Reaction methods, Protein Biosynthesis, SELEX Aptamer Technique methods, Synthetic Biology methods, Transcription, Genetic, Base Pairing, DNA genetics, Genetic Code, Genetic Engineering methods
- Abstract
Artificial extra base pairs (unnatural base pairs, UBPs) expand the genetic alphabet of DNA, thus broadening entire biological systems in the central dogma. UBPs function as third base pairs in replication, transcription, and/or translation, and have created a new research area, synthetic xenobiology, providing genetic engineering tools to generate novel DNAs, RNAs, and proteins with increased functionalities. Several UBPs have been developed and applied to PCR technology, DNA aptamer generation, and semi-synthetic organism creation. Among them, we developed a series of UBPs and demonstrated unique quantitative PCR and high-affinity DNA aptamer generation methods., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
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- 2018
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8. Genetic alphabet expansion biotechnology by creating unnatural base pairs.
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Lee KH, Hamashima K, Kimoto M, and Hirao I
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- Animals, Aptamers, Nucleotide metabolism, DNA metabolism, Humans, Aptamers, Nucleotide chemistry, Base Pair Mismatch, Base Pairing, Biotechnology, DNA chemistry
- Abstract
Recent studies have made it possible to expand the genetic alphabet of DNA, which is originally composed of the four-letter alphabet with A-T and G-C pairs, by introducing an unnatural base pair (UBP). Several types of UBPs function as a third base pair in replication, transcription, and/or translation. Through the UBP formation, new components with different physicochemical properties from those of the natural ones can be introduced into nucleic acids and proteins site-specifically, providing their increased functionalities. Here, we describe the genetic alphabet expansion technology by focusing on three types of UBPs, which were recently applied to the creations of DNA aptamers that bind to proteins and cells and semi-synthetic organisms containing DNAs with a six-letter alphabet., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
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- 2018
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9. TP53 gene status is a critical determinant of phenotypes induced by ALKBH3 knockdown in non-small cell lung cancers.
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Kogaki T, Ohshio I, Kawaguchi M, Kimoto M, Kitae K, Hase H, Ueda Y, Jingushi K, and Tsujikawa K
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- Apoptosis genetics, Cell Cycle Checkpoints genetics, Cell Proliferation genetics, DNA Damage, Humans, Phenotype, Tumor Cells, Cultured, AlkB Homolog 3, Alpha-Ketoglutarate-Dependent Dioxygenase deficiency, AlkB Homolog 3, Alpha-Ketoglutarate-Dependent Dioxygenase genetics, Carcinoma, Non-Small-Cell Lung genetics, Lung Neoplasms genetics, Tumor Suppressor Protein p53 genetics
- Abstract
Human AlkB homolog 3 (ALKBH3) is overexpressed in non-small cell lung cancers (NSCLC) and its high expression is significantly correlated with poor prognosis. While ALKBH3 knockdown induces apoptosis in NSCLC cells, the underlying anti-apoptotic mechanisms of ALKBH3 in NSCLC cells remain unclear. Here we show that ALKBH3 knockdown induces cell cycle arrest or apoptosis depending on the TP53 gene status in NSCLC cells. In comparison to parental cells, TP53-knockout A549 cells showed DNA damage-responsive signal induced by ALKBH3 knockdown. TP53 knockout shifted the phenotypes of A549 cells induced by ALKBH3 knockdown from cell cycle arrest to apoptosis induction, suggesting that the TP53 gene status is a critical determinant of the phenotypes induced by ALKBH3 knockdown in NSCLC cells., (Copyright © 2017 Elsevier Inc. All rights reserved.)
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- 2017
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10. Crystal structure of Deep Vent DNA polymerase.
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Hikida Y, Kimoto M, Hirao I, and Yokoyama S
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- Archaeal Proteins chemistry, Base Pairing, Binding Sites, Crystallography, X-Ray, DNA chemistry, Models, Molecular, Pyrococcus enzymology, Structural Homology, Protein, Taq Polymerase chemistry, DNA-Directed DNA Polymerase chemistry
- Abstract
DNA polymerases are useful tools in various biochemical experiments. We have focused on the DNA polymerases involved in DNA replication including the unnatural base pair between 7-(2-thienyl)imidazo[4,5-b]pyridine (Ds) and 2-nitro-4-propynylpyrrole (Px). Many reports have described the different combinations between unnatural base pairs and DNA polymerases. As an example, for the replication of the Ds-Px pair, Deep Vent DNA polymerase exhibits high efficiency and fidelity, but Taq DNA polymerase shows much lower efficiency and fidelity. In the present study, we determined the crystal structure of Deep Vent DNA polymerase in the apo form at 2.5 Å resolution. Using this structure, we constructed structural models of Deep Vent DNA polymerase complexes with DNA containing an unnatural or natural base in the replication position. The models revealed that the unnatural Ds base in the template-strand DNA clashes with the side-chain oxygen of Thr664 in Taq DNA polymerase, but not in Deep Vent DNA polymerase., (Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2017
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11. Identification of dually acylated proteins from complementary DNA resources by cell-free and cellular metabolic labeling.
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Moriya K, Kimoto M, Matsuzaki K, Kiwado A, Takamitsu E, and Utsumi T
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- Acylation, Animals, COS Cells, Carrier Proteins chemistry, Cell-Free System, Chlorocebus aethiops, Cyclic Nucleotide Phosphodiesterases, Type 2 chemistry, DNA, Complementary chemistry, DNA-Binding Proteins, Endodeoxyribonucleases chemistry, GTP-Binding Protein alpha Subunits, Gi-Go chemistry, Humans, Carrier Proteins biosynthesis, Cyclic Nucleotide Phosphodiesterases, Type 2 biosynthesis, DNA, Complementary metabolism, Endodeoxyribonucleases biosynthesis, GTP-Binding Protein alpha Subunits, Gi-Go biosynthesis, Lipoylation, Palmitic Acid metabolism
- Abstract
To establish a strategy to identify dually fatty acylated proteins from cDNA resources, seven N-myristoylated proteins with cysteine (Cys) residues within the 10 N-terminal residues were selected as potential candidates among 27 N-myristoylated proteins identified from a model human cDNA resource. Seven proteins C-terminally tagged with FLAG tag or EGFP were generated and their susceptibility to protein N-myristoylation and S-palmitoylation were evaluated by metabolic labeling with [(3)H]myristic acid or [(3)H]palmitic acid either in an insect cell-free protein synthesis system or in transfected mammalian cells. As a result, EEPD1, one of five proteins (RFTN1, EEPD1, GNAI1, PDE2A, RNF11) found to be dually acylated, was shown to be a novel dually fatty acylated protein. Metabolic labeling experiments using G2A and C7S mutants of EEPD1-EGFP revealed that the palmitoylation site of EEPD1 is Cys at position 7. Analysis of the intracellular localization of EEPD1 C-terminally tagged with FLAG tag or EGFP and its G2A and C7S mutants revealed that the dual acylation directs EEPD1 to localize to the plasma membrane. Thus, dually fatty acylated proteins can be identified from cDNA resources by cell-free and cellular metabolic labeling of N-myristoylated proteins with Cys residue(s) close to the N-myristoylated N-terminus., (Copyright © 2016 Elsevier Inc. All rights reserved.)
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- 2016
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12. Comparison of stress-induced modulation of smooth-muscle activity between ileum and colon in male rats.
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Kimoto M, Zeredo JL, Ota MS, Nihei Z, and Toda K
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- Acetylcholine metabolism, Animals, Disease Models, Animal, Epinephrine metabolism, Hypergravity, Male, Muscle Contraction physiology, Rats, Wistar, Time Factors, Colon physiopathology, Ileum physiopathology, Muscle, Smooth physiopathology, Stress, Psychological physiopathology
- Abstract
Stress is a well-known cause of numerous digestive conditions, including gastrointestinal-function disorders. The autonomic nervous system regulates intestinal movements via cholinergic and adrenergic efferent fibers; however it is not clear how stress could affect these control mechanisms and in particular whether in a site-dependent manner. In this study we tested in vitro the effects of topical application of acetylcholine (Ach) and adrenalin (Adr) on smooth-muscle contractions of intestinal segments isolated from stress-conditioned rats. Stress was loaded by hypergravity stimulation (10min/day) for periods of 1, 6 or 30days. As a result, stress-conditioning affected intestinal sensitivity to Ach and Adr differently at sections of the ileum and colon. In the ileum no significant differences were found between control and stress-conditioned rats, whereas in the colon, samples from 6- and 30-day stress-conditioned rats showed larger amplitudes of Ach-induced contraction, as well as greater antagonization by Adr application. These results suggest that stress conditioning can modify autonomic control of intestinal movements by altering smooth-muscle sensitivity to Ach and Adr., (Copyright © 2014 Elsevier B.V. All rights reserved.)
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- 2014
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13. Hox transcription factor Antp regulates sericin-1 gene expression in the terminal differentiated silk gland of Bombyx mori.
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Kimoto M, Tsubota T, Uchino K, Sezutsu H, and Takiya S
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- Animals, Animals, Genetically Modified, Base Sequence, Bombyx metabolism, Cell Differentiation, Cloning, Molecular, Female, Gene Expression Profiling, In Situ Hybridization, Larva, Male, Molecular Sequence Data, Promoter Regions, Genetic, RNA Splicing, Recombinant Proteins metabolism, Silk metabolism, Tissue Distribution, Transgenes, Bombyx genetics, Gene Expression Regulation, Developmental, Homeodomain Proteins metabolism, Sericins metabolism
- Abstract
Hox genes are well-known master regulators in developmental morphogenesis along the anteroposterior axis of animals. However, the molecular mechanisms by which Hox proteins regulate their target genes and determine cell fates are not fully understood. The silk gland of Bombyx mori is a tubular tissue divided into several subparts along the anteroposterior axis, and the silk genes are expressed with specific patterns. The sericin-1 gene (ser1) is expressed in the middle silk gland (MSG) with sublocal specificity. Here we show that the Hox protein Antp is a component of the middle silk gland-specific complex, MIC (MSG-intermolt-specific complex), binds to the essential promoter element of ser1, and activates its expression. Ectopic expression of Antp in transgenic silkworms induced the expression of ser1 in the posterior silk gland (PSG), but not in the anterior part of MSG (MSG-A). Correspondingly, a MIC-like complex was formed by the addition of recombinant Antp in extracts from PSG with its cofactors Exd and Hth, but not in extracts from MSG-A. Splicing patterns of ser1 mRNA induced by the ectopic expression of Antp in PSG were almost the same as those in MSG at the fifth instar and altered depending on the induction timing of Antp. Other Hox genes were expressed with sublocal specificity in the silk gland. The Bombyx silk gland might provide a useful system for understanding how Hox proteins select and regulate their target genes., (Copyright © 2013 Elsevier Inc. All rights reserved.)
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- 2014
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14. MD-2-dependent human Toll-like receptor 4 monoclonal antibodies detect extracellular association of Toll-like receptor 4 with extrinsic soluble MD-2 on the cell surface.
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Tsukamoto H, Ihara H, Ito R, Ukai I, Suzuki N, Kimoto M, Tomioka Y, and Ikeda Y
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- Animals, Antibody Affinity, CHO Cells, Cell Line, Cricetinae, Cricetulus, Humans, Lipopolysaccharide Receptors immunology, Lipopolysaccharides immunology, Lymphocyte Antigen 96 chemistry, Lymphocyte Antigen 96 immunology, Protein Conformation, Toll-Like Receptor 4 chemistry, Toll-Like Receptor 4 immunology, Antibodies, Monoclonal immunology, Lymphocyte Antigen 96 metabolism, Toll-Like Receptor 4 metabolism
- Abstract
MD-2 is essential for lipopolysaccharide (LPS) recognition of Toll-like receptor 4 (TLR4) but not for cell surface expression. The TLR4/MD-2 complex is formed intracellularly through co-expression. Extracellular complex formation remains a matter for debate because of the aggregative nature of secreted MD-2 in the absence of TLR4 co-expression. We demonstrated extracellular complex formation using three independent monoclonal antibodies (mAbs), all of which are specific for complexed TLR4 but unreactive with free TLR4 and MD-2. These mAbs bound to TLR4-expressing Ba/F3 cells only when co-cultured with MD-2-secreting Chinese hamster ovary cells or incubated with conditioned medium from these cells. All three mAbs bound the extracellularly formed complex indistinguishably from the intracellularly formed complex in titration studies. In addition, we demonstrated that two mAbs lost their affinity for TLR4/MD-2 on LPS stimulation, suggesting that these mAbs bound to conformation-sensitive epitopes. This was also found when the extracellularly formed complex was stimulated with LPS. Additionally, we showed that cell surface TLR4 and extrinsically secreted MD-2 are capable of forming the functional complex extracellularly, indicating an additional or alternative pathway for the complex formation., (Copyright © 2013 Elsevier Inc. All rights reserved.)
- Published
- 2013
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15. Lipocalin-type prostaglandin D synthase and egg white cystatin react with IgE antibodies from children with egg allergy.
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Suzuki M, Fujii H, Fujigaki H, Shinoda S, Takahashi K, Saito K, Wada H, Kimoto M, Kondo N, and Seishima M
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- Allergens chemistry, Blotting, Western, Child, Child, Preschool, Cloning, Molecular, Cystatins chemistry, Egg Hypersensitivity blood, Egg Hypersensitivity physiopathology, Egg Proteins chemistry, Female, Humans, Immunoglobulin E blood, Immunoglobulin E immunology, Infant, Intramolecular Oxidoreductases chemistry, Intramolecular Oxidoreductases genetics, Intramolecular Oxidoreductases metabolism, Lipocalins chemistry, Lipocalins genetics, Lipocalins metabolism, Male, Mass Spectrometry, Proteomics, Recombinant Fusion Proteins genetics, Allergens immunology, Cystatins immunology, Egg Hypersensitivity immunology, Egg Proteins immunology, Intramolecular Oxidoreductases immunology, Lipocalins immunology
- Abstract
Background: Ovalbumin, ovomucoid, ovotransferrin, lysozyme, and ovomucin are known to be major allergens found in egg white. Egg white protein is composed of over 30 proteins; many of which have neither been identified nor their allergenicities characterized. This study set out to analyze whether unknown proteins that bind to IgE antibodies in serum from patients with egg allergy exist in egg white., Methods: Diluted egg white proteins were separated by 2-dimensional (2-D) gel electrophoresis. Immunolabeling was performed on individual patient sera from 19 child patients with egg white allergy and 11 negative control subjects. Spots of egg white proteins that bound to the patients' IgE were identified by mass spectrometry-based proteomics., Results: Egg white proteins were separated into 63 spots. Twenty-five of the 63 reacted with egg allergy patients' sera, and 10 of the 25 reactive spots showed IgE-reactivity to controls as well. Specific bindings to the IgE from egg allergy patients were found in 15 spots; one of which was confirmed as ovotransferrin. Among the other 14 protein spots, egg white cystatin and lipocalin-type prostaglandin D synthase (L-PGDS) were newly identified proteins that reacted with IgE in patients with egg allergy., Conclusions: We demonstrated that L-PGDS and cystatin reacted with serum IgE in patients with egg allergy. Our proteomics-based analysis in egg white gives a comprehensive map of proteins bound with IgE and should assist in enabling more accurate diagnoses and recommendations of desensitizing treatments for individual patients.
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- 2010
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16. Functional expression of single-chain antibody to leukotriene C(4).
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Kawakami Y, Yamashita C, Kashiwase Y, Morinaka T, Suzuki-Yamamoto T, Yamashita H, Kimoto M, Tsuji H, Kurahashi Y, Daiyasu H, Toh H, Sugahara M, Miyano M, Yamamoto S, and Takahashi Y
- Subjects
- Amino Acid Sequence, Animals, Antibodies, Monoclonal genetics, Cloning, Molecular, DNA, Complementary genetics, Immunoglobulin Light Chains genetics, Mice, Molecular Sequence Data, Recombinant Proteins biosynthesis, Recombinant Proteins genetics, Antibodies, Monoclonal biosynthesis, Immunoglobulin Light Chains biosynthesis, Leukotriene C4 immunology
- Abstract
Leukotriene C(4) (LTC(4)) is synthesized by binding of glutathione to LTA(4), an epoxide derived from arachidonic acid, and further metabolized to LTD(4) and LTE(4). We previously prepared a monoclonal antibody with a high affinity and specificity to LTC(4). To explore the structure of the antigen-binding site of a monoclonal antibody against LTC(4) (mAbLTC), we isolated full-length cDNAs for heavy and light chains of mAbLTC. The heavy and light chains consisted of 461 and 238 amino acids including a signal peptide with molecular weights of 51,089 and 26,340, respectively. An expression plasmid encoding a single-chain antibody comprising variable regions of mAbLTC heavy and light chains (scFvLTC) was constructed and expressed in COS-7 cells. The recombinant scFvLTC showed a high affinity with LTC(4) comparable to mAbLTC. The scFvLTC also bound to LTD(4) and LTE(4) with 48% and 17% reactivities, respectively, as compared with LTC(4) binding, whereas the antibody showed almost no affinity for LTB(4).
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- 2010
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17. Penta-acylated lipopolisaccharide binds to murine MD-2 but does not induce the oligomerization of TLR4 required for signal transduction.
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Tsuneyoshi N, Kohara J, Bahrun U, Saitoh S, Akashi S, Gauchat JF, Kimoto M, and Fukudome K
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- Animals, Cell Line, Enzyme-Linked Immunosorbent Assay, Fluorescent Antibody Technique, Immunoprecipitation, Lipopolysaccharides chemistry, Lipopolysaccharides immunology, Mice, Recombinant Proteins chemistry, Recombinant Proteins immunology, Recombinant Proteins metabolism, Toll-Like Receptor 4 chemistry, Transfection, Lipopolysaccharides metabolism, Lymphocyte Antigen 96 metabolism, Signal Transduction physiology, Toll-Like Receptor 4 metabolism
- Abstract
A mutant lipopolysaccharide (LPS) lacking a myristate chain in lipid A was shown to be non-pathogenic both in humans and mice. The mutant penta-acylated LPS from the lpxM-strain did not induce TNF-alpha production in murine peritoneal macrophages, or activation of NF-kappaB in transfected cells expressing murine TLR4/MD-2. We prepared a recombinant murine MD-2 in Escherichia coli (E. coli), and examined the binding function. Unexpectedly, specific binding was detected to both wild type and mutant LPS. However, the mutant LPS did not induce conformation changes or oligomerization of TLR4, which have been shown to be required for signal transduction. Mutant LPS appears to fail to induce appropriate conformational changes, resulting in oligomerization of the murine complex for triggering cell responses.
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- 2006
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18. Identification of a novel isoform of MD-2 that downregulates lipopolysaccharide signaling.
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Ohta S, Bahrun U, Tanaka M, and Kimoto M
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- Amino Acid Sequence, Animals, Cell Line, Cells, Cultured, Dose-Response Relationship, Drug, Down-Regulation drug effects, Down-Regulation physiology, Female, Humans, Kidney drug effects, Kidney embryology, Lymphocyte Antigen 96, Mice, Mice, Inbred C57BL, Molecular Sequence Data, Protein Isoforms chemistry, Protein Isoforms metabolism, Sequence Homology, Amino Acid, Signal Transduction drug effects, Antigens, Ly chemistry, Antigens, Ly metabolism, Bone Marrow Cells metabolism, Kidney metabolism, Lipopolysaccharides pharmacology, Signal Transduction physiology
- Abstract
MD-2 is an association molecule of Toll-like receptor 4 and is indispensable for the recognition of lipopolysaccharide. Here we report the identification of mRNA for an alternatively spliced form of MD-2, named MD-2B, which lacks the first 54 bases of exon 3. When overexpressed with MD-2, MD-2B competitively suppressed NF-kappaB activity induced by LPS. Regardless of the truncation, however, MD-2B still bound to TLR4 as efficiently as MD-2. Flow cytometric analyses revealed that MD-2B inhibited TLR4 from being expressed on the cell surface. Our data indicate that MD-2B may compete with MD-2 for binding to TLR4 and decrease the number of TLR4/MD-2 complexes on the cell surface, resulting in the inhibition of LPS signaling.
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- 2004
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19. Site-specific incorporation of a photo-crosslinking component into RNA by T7 transcription mediated by unnatural base pairs.
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Kimoto M, Endo M, Mitsui T, Okuni T, Hirao I, and Yokoyama S
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- Bacteriophage T7 enzymology, Bacteriophage T7 genetics, Base Sequence, Binding Sites, Cross-Linking Reagents metabolism, Humans, Hydrogen Bonding, Models, Chemical, Molecular Sequence Data, Molecular Structure, Nucleotides chemistry, Protein Binding, Pyridones chemistry, RNA chemistry, Transcription, Genetic, Viral Proteins, Base Pairing, DNA-Directed RNA Polymerases metabolism, Nucleotides metabolism, Pyridones metabolism, RNA metabolism
- Abstract
A photo-sensitive ribonucleotide of 5-iodo-2-oxo(1H) pyridine (Iy) capable of site-specific incorporation into transcripts was developed. The site-specific Iy incorporation into RNA was achieved by T7 transcription mediated by unnatural base pairing between Iy and its partner, 2-amino-6-(2-thienyl)purine (s). By this specific transcription, Iy was incorporated into an anti(Raf-1) RNA aptamer, which binds to human Raf-1 and inhibits the interaction between Raf-1 and Ras. Protein-dependent photo-dimerization of the aptamer was observed when Iy was located at specific positions in the aptamer, showing that the site-specific incorporation of the photo-sensitive component into RNA achieves highly specific crosslinking. This specific transcription mediated by the unnatural base pair would be a powerful tool for generating high-affinity RNA ligands and for analyzing RNA-RNA and RNA-protein interactions, as well as for constructing RNA-based nanostructures.
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- 2004
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20. Requirement for MD-1 in cell surface expression of RP105/CD180 and B-cell responsiveness to lipopolysaccharide.
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Nagai Y, Shimazu R, Ogata H, Akashi S, Sudo K, Yamasaki H, Hayashi S, Iwakura Y, Kimoto M, and Miyake K
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- Animals, Antibodies, Monoclonal biosynthesis, Antibodies, Monoclonal pharmacology, Antigens, Surface genetics, Antigens, Surface immunology, B-Lymphocytes drug effects, Drug Interactions, Lymphocyte Activation drug effects, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Knockout, Spleen cytology, Antigens, CD, Antigens, Surface metabolism, Antigens, Surface physiology, B-Lymphocytes immunology, Lipopolysaccharides pharmacology
- Abstract
RP105 is a B-cell surface molecule that has been recently assigned as CD180. RP105 ligation with an antibody induces B-cell activation in humans and mice, leading to proliferation and up-regulation of a costimulatory molecule, B7.2/CD86. RP105 is associated with an extracellular molecule, MD-1. RP105/MD-1 has structural similarity to Toll-like receptor 4 (TLR4)/MD-2. TLR4 signals a membrane constituent of Gram-negative bacteria, lipopolysaccharide (LPS). MD-2 is indispensable for TLR4-dependent LPS responses because cells expressing TLR4/MD-2, but not TLR4 alone, respond to LPS. RP105 also has a role in LPS responses because B cells lacking RP105 show hyporesponsiveness to LPS. Little is known, however, regarding whether MD-1 is important for RP105-dependent LPS responses, as MD-2 is for TLR4. To address the issue, we developed mice lacking MD-1 and generated monoclonal antibodies (mAbs) to the protein. MD-1-null mice showed impairment in LPS-induced B-cell proliferation, antibody production, and B7.2/CD86 up-regulation. These phenotypes are similar to those of RP105-null mice. The similarity was attributed to the absence of cell surface RP105 on MD-1-null B cells. MD-1 is indispensable for cell surface expression of RP105. A role for MD-1 in LPS responses was further studied with anti-mouse MD-1 mAbs. In contrast to highly mitogenic anti-RP105 mAbs, the mAbs to MD-1 were not mitogenic but antagonistic on LPS-induced B-cell proliferation and on B7.2 up-regulation. Collectively, MD-1 is important for RP105 with respect to B-cell surface expression and LPS recognition and signaling.
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- 2002
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21. Antiadhesive function of 130-kd glycoform of CD43 expressed in CD4 T-lymphocyte clones and transfectant cell lines.
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Fukuoka M, Fukudome K, Yamashita Y, Tokushima M, Miyake K, and Kimoto M
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- 3T3 Cells cytology, Animals, Antibodies, Monoclonal immunology, Antibody Specificity, B-Lymphocytes cytology, CD4-Positive T-Lymphocytes cytology, CD4-Positive T-Lymphocytes drug effects, Cell Line, Clone Cells physiology, DNA, Complementary genetics, Female, Leukosialin, Male, Mice, Mice, Inbred BALB C, Mice, Inbred NZB, Molecular Weight, N-Acetylglucosaminyltransferases genetics, N-Acetylglucosaminyltransferases metabolism, Protein Isoforms chemistry, Rats, Rats, Wistar, Sialoglycoproteins chemistry, Tetradecanoylphorbol Acetate pharmacology, Transfection, Tumor Cells, Cultured, Antigens, CD, CD4-Positive T-Lymphocytes physiology, Cell Adhesion physiology, Protein Isoforms physiology, Sialoglycoproteins physiology
- Abstract
Conflicting findings regarding proadhesion and antiadhesion in cell-to-cell interactions were previously reported for CD43. We examined possible differences in the role of the 130-kd glycoform and the 115-kd glycoform of CD43 in cellular adhesion in vitro. We generated a monoclonal antibody (MFT3) that discriminates between helper and nonhelper murine T-cell clones. Characterization of MFT3 with use of biochemical analysis and complementary DNA (cDNA) transfection experiments showed that it is specific for the 130-kd glycoform of CD43. T-cell clones that expressed the 130-kd CD43 glycoform showed decreased homocytic aggregation and decreased adhesion to spleen cells, B-lymphoma cell lines, and fibroblastic cell lines compared with T-cell clones negative for the 130-kd glycoform. Expression of core 2 beta-1, 6-N-acetylglucosaminyltransferase (C2GnT) cDNA together with CD43 cDNA resulted in expression of both the 130-kd CD43 glycoform and the 115-kd CD43 glycoform in fibroblastic cell lines. Using these cell lines, we showed that the 130-kd glycoform but not the 115-kd glycoform of CD43 has an antiadhesive function in cellular interactions. Our findings suggest that the antiadhesive function of CD43 is primarily carried out by the 130-kd glycoform. (Blood. 2000;96:4267-4275)
- Published
- 2000
22. Renal expression of constitutive NOS and DDAH: separate effects of salt intake and angiotensin.
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Tojo A, Kimoto M, and Wilcox CS
- Subjects
- Animals, Endothelium, Vascular enzymology, Kidney Cortex blood supply, Kidney Tubules, Distal cytology, Kidney Tubules, Distal enzymology, Male, Nitric Oxide Synthase Type I, Nitric Oxide Synthase Type III, Rats, Rats, Sprague-Dawley, Receptor, Angiotensin, Type 1, Receptor, Angiotensin, Type 2, Receptors, Angiotensin physiology, Tissue Distribution, Amidohydrolases, Angiotensin II physiology, Diet, Sodium-Restricted, Hydrolases metabolism, Kidney enzymology, Nitric Oxide Synthase metabolism
- Abstract
Background: Nitric oxide (NO) is generated from NO synthase (NOS) isoforms. These enzymes can be inhibited by asymmetric dimethylarginine, which is inactivated by N(G)-N(G)-dimethylarginine dimethylaminohydrolase (DDAH). The neuroneal (nNOS) type I and endothelial (eNOS) type III constitutive NOS isoforms are expressed predominantly in the macula densa and microvascular endothelium of the renal cortex, respectively. DDAH is expressed at sites of NOS expression. Since NO may coordinate the renal responses to angiotensin II (Ang II) and changes in salt intake, we tested the hypothesis that salt intake regulates the expression of nNOS, eNOS and DDAH by Ang II acting on type 1 (AT(1)) receptors., Methods: Groups (N = 6) of rats were adapted to low-salt (LS) or high-salt (HS) intakes for 10 days. Other groups of LS and HS rats received the AT(1) receptor antagonist losartan for six days (to test the effects of salt independent of AT(1) receptors). A further group of HS rats received an infusion of Ang II for six days (to test the effect of Ang II independent of salt intake)., Results: Compared with HS rats, there was a significant (P < 0.05) increase in LS rats of nNOS protein in kidney and immunohistochemical expression in the macula densa, and of eNOS protein expression and immunohistochemical expression in the microvascular endothelium, and of DDAH protein expression. Losartan prevented these effects of salt on the expression of eNOS or DDAH, both of which were also increased by Ang II infusions in HS rats. In contrast, losartan did not prevent the effects of salt on nNOS expression, which was unresponsive to Ang II infusion. The generation of NO(2)(-) released by slices of renal cortex, in the presence of saturating concentrations of L-arginine, was increased by LS, compared to HS, independent of losartan and by Ang II during HS., Conclusion: The expressions of eNOS in cortical microvascular endothelium and DDAH in kidney are enhanced by Ang II acting on AT(1) receptors. The expression of nNOS in the macula densa is enhanced by salt restriction independent of Ang II or AT(1) receptors.
- Published
- 2000
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23. Regulatory roles for CD14 and phosphatidylinositol in the signaling via toll-like receptor 4-MD-2.
- Author
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Akashi S, Ogata H, Kirikae F, Kirikae T, Kawasaki K, Nishijima M, Shimazu R, Nagai Y, Fukudome K, Kimoto M, and Miyake K
- Subjects
- Animals, Antibodies, Monoclonal, B-Lymphocytes drug effects, B-Lymphocytes immunology, B-Lymphocytes metabolism, Cell Line, Humans, Lipopolysaccharides pharmacology, Membrane Glycoproteins antagonists & inhibitors, Membrane Glycoproteins genetics, Mice, Monocytes drug effects, Monocytes immunology, Monocytes metabolism, Receptors, Cell Surface antagonists & inhibitors, Receptors, Cell Surface genetics, Signal Transduction, Toll-Like Receptor 4, Toll-Like Receptors, Transfection, Drosophila Proteins, Lipopolysaccharide Receptors metabolism, Membrane Glycoproteins metabolism, Phosphatidylinositols metabolism, Receptors, Cell Surface metabolism
- Abstract
The complex consisting of Toll-like receptor 4 (TLR4) and associated MD-2 signals the presence of lipopolysaccharide (LPS) when it is expressed in cell lines. We here show that normal human mononuclear cells express TLR4 and signal LPS via TLR4. CD14 is a molecule that binds to LPS and facilitates its signaling. Little is known, however, about the relationship of CD14 with TLR4-MD-2. We show that CD14 helps TLR4-MD-2 to sense and signal the presence of LPS. CD14 has also been implicated in recognition of apoptotic cells, which leads to phagocytosis without activation. Membrane phospholipids such as phosphatidylserine (PS) or phosphatidylinositol (PtdIns) are thought to serve as the ligands for CD14 in apoptotic cells. We find that PtdIns acts as an LPS antagonist in the signaling via TLR4-MD-2. TLR4-MD-2 seems to discriminate LPS from phospholipids. The signaling via TLR4-MD-2 is thus regulated by CD14 and phospholipid such as PtdIns., (Copyright 2000 Academic Press.)
- Published
- 2000
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24. The endothelial cell protein C receptor (EPCR) functions as a primary receptor for protein C activation on endothelial cells in arteries, veins, and capillaries.
- Author
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Ye X, Fukudome K, Tsuneyoshi N, Satoh T, Tokunaga O, Sugawara K, Mizokami H, and Kimoto M
- Subjects
- Antibodies, Monoclonal, Cell Line, Dose-Response Relationship, Drug, Heart anatomy & histology, Humans, Kinetics, Liver anatomy & histology, Lung anatomy & histology, Receptors, Cell Surface analysis, Receptors, Cell Surface immunology, Vena Cava, Inferior anatomy & histology, Arteries metabolism, Blood Coagulation Factors, Capillaries metabolism, Endothelium, Vascular metabolism, Protein C metabolism, Receptors, Cell Surface physiology, Veins metabolism
- Abstract
Plasma protein C functions as an anticoagulant when it is converted to the active form of serine protease. Protein C activation has been found to be mediated by the endothelial cell surface thrombin/thrombomodulin (TM) complex. In addition, we recently identified the endothelial cell protein C/activated protein C receptor (EPCR) which is capable of high-affinity binding for protein C. In this study, we established monoclonal antibodies (mAbs) against EPCR including several function blocking antibodies. Immunohistochemical analysis using these mAbs demonstrated that EPCR is widely expressed in the endothelial cells of arteries, veins, and capillaries in the lung, heart, and skin. Function blocking anti-EPCR mAbs strongly inhibited protein C activation mediated by primary cultured arterial endothelial cells which express abundant EPCR. Anti-EPCR mAbs also prevent protein C activation mediated by microvascular endothelial cells. These results indicate that EPCR functions as an important regulator for the protein C pathway in various types of vessels., (Copyright 1999 Academic Press.)
- Published
- 1999
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25. RP105 is associated with MD-1 and transmits an activation signal in human B cells.
- Author
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Miura Y, Shimazu R, Miyake K, Akashi S, Ogata H, Yamashita Y, Narisawa Y, and Kimoto M
- Subjects
- Amino Acid Sequence, Animals, Antibodies, Monoclonal immunology, Antigens, Surface metabolism, Base Sequence, Chickens, Cloning, Molecular, DNA, Complementary genetics, Humans, Lymphoma pathology, Macromolecular Substances, Membrane Proteins metabolism, Mice, Mice, Inbred BALB C, Molecular Sequence Data, Palatine Tonsil cytology, Recombinant Fusion Proteins biosynthesis, Recombinant Fusion Proteins immunology, Sequence Alignment, Sequence Homology, Amino Acid, Signal Transduction, Species Specificity, Tumor Cells, Cultured, Antigens, CD, Antigens, Surface immunology, B-Lymphocytes immunology, Germinal Center immunology, Lymphocyte Activation, Membrane Glycoproteins, Membrane Proteins immunology
- Abstract
RP105 was originally discovered as a mouse B-cell surface molecule that transmits an activation signal. The signal leads to resistance against irradiation-induced apoptosis and massive B-cell proliferation. Recently, we found that mouse RP105 is associated with another molecule, MD-1. We have isolated here the human MD-1 cDNA. We show that human MD-1 is also associated with human RP105 and has an important role in cell surface expression of RP105. We also describe a monoclonal antibody (MoAb) that recognizes human RP105. Expression of RP105 is restricted to CD19(+) B cells. Histological studies showed that RP105 is expressed mainly on mature B cells in mantle zones. Germinal center cells are either dull or negative. RP105 is thus a novel human B-cell marker that is preferentially expressed on mature B cells. Moreover, the anti-RP105 MoAb activates B cells, leading to increases in cell size, expression of a costimulatory molecule CD80, and DNA synthesis. The B-cell activation pathway using RP105 is conserved in humans., (Copyright 1998 by The American Society of Hematology.)
- Published
- 1998
26. c-Src and phosphatidylinositol 3-kinase are involved in NGF-dependent tyrosine phosphorylation of Shc in PC12 cells.
- Author
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Sato K, Otsuki T, Kimoto M, Kakumoto M, Tokmakov AA, Watanabe Y, and Fukami Y
- Subjects
- Animals, CSK Tyrosine-Protein Kinase, PC12 Cells, Phosphorylation, Rats, Shc Signaling Adaptor Proteins, Src Homology 2 Domain-Containing, Transforming Protein 1, Tyrosine metabolism, src Homology Domains, src-Family Kinases, Adaptor Proteins, Signal Transducing, Adaptor Proteins, Vesicular Transport, Nerve Growth Factors pharmacology, Phosphatidylinositol 3-Kinases metabolism, Protein-Tyrosine Kinases metabolism, Proteins metabolism, Signal Transduction drug effects
- Abstract
The adaptor protein Shc exists in three isoforms; p46, p52, and p66, and is a key regulator of a variety of biological processes. Our previous studies have shown that the tyrosine kinase c-Src phosphorylates Shc in a phosphatidylinositol (PtdIns) 4,5-bisphosphate-dependent manner. Here we demonstrate that PtdIns 3,4,5-trisphosphate stimulates phosphorylation of Shc by c-Src. The phosphorylation is blocked by a glutathione S-transferase fusion protein containing Shc phosphotyrosine binding (PTB) domain or a phosphotyrosine-containing Shc PTB domain-binding peptide. In rat pheochromocytoma cell line PC12, nerve growth factor (NGF) stimulates tyrosine phosphorylation of both Triton-soluble and -insoluble Shc which was maximal at 2-5 min after NGF treatment. We find that pretreatment of PC12 cells with the PtdIns 3-kinase inhibitor wortmannin or LY294002 results in almost half inhibition of the NGF-dependent tyrosine phosphorylation of only Triton-insoluble Shc. Similar inhibitory effect is observed with tyrosine kinase inhibitors genistein and PP1. Upon NGF stimulation, c-Src also becomes tyrosine-phosphorylated and accumulates in the Triton-insoluble fraction. The c-Src events are insensitive to wortmannin but sensitive to genistein. These results suggest that coordinate action of PtdIns 3-kinase and/or PtdIns 3,4,5-trisphosphate and c-Src can function as positive regulator in tyrosine phosphorylation of Shc in vitro and in vivo.
- Published
- 1998
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27. Colocalization of demethylating enzymes and NOS and functional effects of methylarginines in rat kidney.
- Author
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Tojo A, Welch WJ, Bremer V, Kimoto M, Kimura K, Omata M, Ogawa T, Vallance P, and Wilcox CS
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- Animals, Arginine pharmacokinetics, Arginine pharmacology, Blotting, Western, Hydrolases metabolism, Hydrolases pharmacology, Kidney Glomerulus drug effects, Kidney Glomerulus ultrastructure, Loop of Henle metabolism, Male, Methylation, Microscopy, Immunoelectron, Nitric Oxide Synthase antagonists & inhibitors, Nitric Oxide Synthase metabolism, Rats, Rats, Sprague-Dawley, Tritium, Amidohydrolases, Arginine analogs & derivatives, Enzyme Inhibitors pharmacology, Hydrolases analysis, Kidney Glomerulus enzymology, Nitric Oxide Synthase analysis, omega-N-Methylarginine pharmacology
- Abstract
NG-monomethylarginine (L-NMA) and asymmetric NG, NG-dimethylarginines (ADMA) are endogenous inhibitors of cellular L-arginine uptake and/or nitric oxide (NO) synthesis that are implicated in renal parenchymal and Dahl salt-sensitive hypertension. Since the L-arginine:(L-NMA + ADMA) ratio determines NO synthase (NOS) activity, we compared the immunohistochemical distribution of NOS with NG, NG-dimethylarginine dimethylaminohydrolase (DDAH), which inactivates dimethylarginines (DMA) and L-NMA by hydrolysis to L-citrulline. Neuronal NOS (nNOS) was expressed predominantly in tubular epithelial cells of macula densa (MD), endothelial NOS (eNOS) in vascular endothelial cells (EC), and inducible NOS (iNOS) quite widely in tubular epithelium, including proximal tubules (PT), thick ascending limbs of Henle (TAL), distal convoluted tubule and intercalated cells (IC) of the collecting duct. Immunostaining for DDAH was present in PT, TAL, MD, and IC, and was also present in the glomerulus, Bowman's capsule, and endothelium of blood vessels. DDAH was detected in small vesicles of TAL and PT by electron microscopic (EM) immunocytochemistry. To study the effects of methylarginines on tubuloglomerular feedback (TGF) response, vehicle or methylarginines (10(-3) M) were added to artificial tubular fluid (ATF) perfused orthogradely from the late PT at 40 nl. min-1 while assessing changes in glomerular capillary pressure from proximal stop flow pressure (PSF). Whereas the maximal TGF responses were unchanged by vehicle (delta TGF 0 +/- 0%) or symmetric DMA (SDMA; +1 +/- 2%, NS), they were enhanced by L-NMA (+22 +/- 4%, P < 0.001) and asymmetric DMA (ADMA; +28 +/- 3%, P < 0.001). Since L-arginine transport can regulate renal epithelial NO generation, methylarginines (10(-3) M) or vehicle were co-perfused orthogradely with [3H]-L-arginine from the late PT and collected at the early distal tubule to study arginine uptake from the perfused loop of Henle. All methylarginines reduced fractional loop [3H] absorption significantly (P < 0.001; vehicle, 84 +/- 6; ADMA, 49 +/- 6; SDMA, 56 +/- 6; L-NMA, 41 +/- 6%). In conclusion, sites of DDAH expression in the vasculature or nephron are all sites of expression of an isoform of NOS. L-NMA, ADMA, and SDMA all inhibit renal tubular L-arginine uptake, whereas L-NMA and ADMA, but not SDMA, enhance TGF responses. Therefore, DDAH may regulate the cellular L-arginine: methylarginine levels in specific renal cells, thereby governing cell-specific L-arginine uptake and NO generation in renal tubular epithelium.
- Published
- 1997
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28. Differential display cloning of a novel rat cDNA (RNB6) that shows high expression in the neonatal brain revealed a member of Ena/VASP family.
- Author
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Ohta S, Mineta T, Kimoto M, and Tabuchi K
- Subjects
- Amino Acid Sequence, Animals, Animals, Newborn, Base Sequence, Blotting, Northern, Cloning, Molecular, DNA, Complementary, Molecular Sequence Data, RNA genetics, RNA metabolism, Rats, Rats, Wistar, Sequence Homology, Amino Acid, Brain metabolism, Cell Adhesion Molecules, Microfilament Proteins genetics, Phosphoproteins genetics, Proteins genetics
- Abstract
We have used the differential display method to identify genes that control the neural cell development in CNS. Screening of the differential display bands that showed higher expression at neonate than at adult age enabled us to identify a novel rat cDNA (RNB6) coding for a protein of 393 amino acid residues. Database search revealed this gene as a rat homologue of the murine EVL, a member of Ena/VASP protein family that is implicated to be involved in the control of cell motility through actin filament assembly by their GP5 motifs. Although the precise characterization of EVL was not reported, our Northern blot and immunoblot analyses demonstrated that RNB6 expression in the brain gradually increases during embryonic development, reaches maximum at postnatal day 1 and decreases thereafter. Studies of tissue distribution revealed the expression of RNB6 not only in the brain but also in the spleen, thymus and testis. Histochemical analyses showed that RNB6 protein is mainly expressed in neurons and may be expressed in neural fibers. Our analyses suggest that RNB6 is critically involved in the development of CNS probably through the control of neural cell motility and/or including neuronal fiber extension.
- Published
- 1997
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29. Efficient isolation of mutant antigen presenting cell lines by functional selection using T cell clones.
- Author
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Koarada S, Kubota E, Tokushima M, Naitoh K, Miyake K, and Kimoto M
- Subjects
- Animals, Antibodies, Monoclonal, Antigen-Presenting Cells cytology, Cell Communication immunology, Cell Line, Clone Cells, Female, Flow Cytometry methods, Genetic Variation, Histocompatibility Antigens Class II genetics, Hybridomas immunology, Male, Mice, Mice, Inbred NZB, Transfection, Antigen-Presenting Cells immunology, Cell Separation methods, Immunologic Techniques, Mutation, T-Lymphocytes immunology
- Abstract
An efficient method for the isolation of mutant antigen-presenting cell (APC) lines is described. When mixtures of transfectant APC lines TA beta z (that express A beta z/A alpha d MHC class II molecules) and hypothetical variant APC lines TA beta d (that express A beta d/A alpha d class II molecules) were cultured with and selected by autoreactive A beta z/A alpha d-restricted T cell clones, the percentage of TA beta d APC lines increased from less than 1% of the original APC mixtures to almost 100% after several cycles of selection. This increase of hypothetical variant was shown to be due to the formation of aggregates of wild-type TA beta z APC lines with A beta z/A alpha d-restricted autoreactive T cell clones that results in the inhibition of proliferation and probably killing of TA beta z APC lines. Based on this, ethyl methane sulfonate (EMS)-treated TA beta z APC lines or B-B hybridoma APC lines MW4 (that express A beta z/A alpha d and A beta z/A alpha z class II molecules) were cultured with and selected by A beta z/A alpha d-restricted autoreactive T cell clones to obtain mutant APC lines that escaped the recognition by T cell clones. After cloning, about 43% of clones examined lost the ability to stimulate T cell clones with concomitant loss of class II molecule expression. Less than 1% showed loss of stimulatory activity against T cell clones in spite of the expression of normal amounts of class II molecules. Initial analysis revealed that they include APC mutant lines with (1) altered MHC class II sequences, (2) loss of adhesion molecule expression and (3) possible impairment of the peptide loading. The method described here may provide a variety of mutant APC lines that are useful for the analysis of antigen processing and presentation pathways as well as of class II structure for T cell stimulation.
- Published
- 1995
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30. Antibody production system modulated by oral administration of human milk and TGF-beta.
- Author
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Ishizaka S, Kimoto M, Tsujii T, and Saito S
- Subjects
- Adjuvants, Immunologic pharmacology, Administration, Oral, Animals, Female, Hemolytic Plaque Technique, Immunization, Mice, Mice, Inbred DBA, Transforming Growth Factor beta immunology, Antibody Formation, Milk, Human, Transforming Growth Factor beta pharmacology
- Abstract
Human milk contains large amounts of transforming growth factor-beta (TGF-beta), which exerts powerful suppressive effects on many immune functions. Oral administration of human milk and TGF-beta in mice strongly inhibited anti-sheep red blood cell (SRBC) responses obtained following oral immunization with SRBC, but enhanced the responses elicited by intraperitoneal, intrabronchial or intravenous immunization with SRBC. Anti-SRBC antibody responses stimulated by intraperitoneal or intravenous immunization with SRBC failed to augment when TGF-beta-depleted human milk was given orally. These findings suggest that TGF-beta in human milk functions as an adjuvant for protective antibody responses against parenteral infections.
- Published
- 1994
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31. Parotin subunit as a potent polyclonal B cell activator binds to newly found glycosylphosphatidylinositol (GPI)-anchored proteins on human B cell surfaces.
- Author
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Ishizaka S, Kimoto M, and Tsujii T
- Subjects
- Animals, Carrier Proteins physiology, Cell Membrane metabolism, Cells, Cultured, Female, Humans, Mice, Mice, Inbred C57BL, Salivary Proteins and Peptides pharmacology, Signal Transduction, B-Lymphocytes immunology, Carrier Proteins analysis, Glycosylphosphatidylinositols metabolism, Lymphocyte Activation, Salivary Proteins and Peptides metabolism
- Abstract
Parotin subunit (PS) is a unique glycoprotein, isolated from bovine parotid glands, which possesses the ability to induce polyclonal antibody production and IL-1-like activity. The present studies investigated the existence of receptors for PS on B cell surfaces using PS-affinity chromatography. No PS-binding proteins (PSR) solubilized from human B cell surfaces with Triton X-100 were detected, whereas the PSR released from human B cell membranes with phosphatidylinositol-specific phospholipase C (PI-PLC) treatment were composed of 75- and 40-kDa proteins. PI-PLC treatment markedly reduced polyclonal antibody responses to PS but weakly inhibited the responses to PWM, xanthan gum, and LPS in human and mouse lymphocytes. Addition of PSR caused a dose-related reduction in polyclonal IgM and IgG antibody responses to PS. These results suggest that PSR can act as glycosylphosphatidylinositol-anchored receptors for PS.
- Published
- 1994
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32. Induction of tyrosine phosphorylation in human B lineage cells by crosslinking MB-1 molecule of B cell receptor-related heterodimer complex.
- Author
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Kuwahara K, Igarashi H, Kawai T, Ichigi Y, Muraguchi A, Mason DY, Kimoto M, Inui S, and Sakaguchi N
- Subjects
- Amino Acid Sequence, Antibodies pharmacology, Antibodies, Monoclonal pharmacology, B-Lymphocytes, Cell Line, Cross-Linking Reagents, Humans, Macromolecular Substances, Molecular Sequence Data, Oligopeptides chemical synthesis, Oligopeptides immunology, Phosphoproteins isolation & purification, Phosphoproteins metabolism, Phosphorylation, Phosphotyrosine, Protein-Tyrosine Kinases isolation & purification, Proto-Oncogene Proteins isolation & purification, Proto-Oncogene Proteins metabolism, Proto-Oncogene Proteins c-fyn, Tumor Cells, Cultured, Tyrosine metabolism, Protein-Tyrosine Kinases metabolism, Receptors, Antigen, B-Cell metabolism, Tyrosine analogs & derivatives, src-Family Kinases
- Abstract
B cell antigen receptor is composed of immunoglobulin and associated MB-1 and B29. Here, we found that anti-human MB-1 stimulation induced tyrosine phosphorylation in immature B cells (FL4.4 and Nalm-6) but not in mature B cells (Daudi). Coprecipitated complex with the heterodimer component in Daudi and Nalm-6 contained the kinase molecule(s) which act on the heterodimer protein, while the complex in early lymphoid cell with germ line antigen receptor genes (FL4.4) did not. Candidate Fyn and Lyn are expressed in Nalm-6 and Daudi but are not expressed in FL4.4. These results suggested that src-type tyrosine kinases as Fyn and Lyn are responsible for the phosphorylation of MB-1 and B29 heterodimer, but anti-MB-1 stimulation can induce tyrosine phosphorylation reaction mediated by other kinase molecule(s) in the progenitor type cells.
- Published
- 1993
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33. Generation of cells with morphological and antigenic properties of microglia from cloned EBV-transformed lymphoid progenitor cells derived from human fetal liver.
- Author
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Ichigi Y, Naitoh K, Tokushima M, Haraoka S, Tagoh H, Kimoto M, and Muraguchi A
- Subjects
- Antigens, CD analysis, Antigens, CD19, Antigens, Differentiation, B-Lymphocyte analysis, Antigens, Differentiation, T-Lymphocyte analysis, Base Sequence, CD2 Antigens, Cell Differentiation drug effects, Cell Line, Cell Transformation, Viral, Clone Cells, Flow Cytometry, Gene Expression, Gene Rearrangement, B-Lymphocyte, Gene Rearrangement, T-Lymphocyte, Herpesvirus 4, Human, Humans, Liver cytology, Molecular Sequence Data, Neuroglia immunology, Oligodeoxyribonucleotides chemistry, Proteins genetics, RNA, Messenger genetics, Receptors, Immunologic analysis, Tetradecanoylphorbol Acetate pharmacology, Homeodomain Proteins, Liver embryology, Lymphocytes cytology, Neuroglia cytology
- Abstract
Single-cell clones from the Epstein Barr virus transformed lymphoid progenitor-like cell line established from human fetal liver at 8-week gestation, have been derived and characterized. These clones retained immunoglobulin (Ig) and T cell receptor (TCR) genes in their germ line configuration. They expressed HLA-DR and some B lymphoid markers such as CD19, CD20, and in some, the T lymphoid marker, CD2. They did not express surface Igs, CD3, CD4, CD8 or TCRs (alpha/beta, gamma/delta). A sensitive RT-PCR assay revealed that they did not express mRNA for a recombination activating gene-1, which is expressed after commitment to lymphoid cells. These results suggest that the established cloned lines are very early lymphoid progenitors that have not yet been committed to lymphoid cell lineage. In one of the lines, FL8.2.1.4, a marked morphological change that resembled microglia was induced when the cells were cultured in the presence of phorbol myristate acetate (PMA). After 72 hr of culture, 5-10% of FL8.2.1.4 cells developed a microglial morphology when stimulated with 10 to 100 ng/ml PMA. The newly generated cells with microglial morphology expressed HLA-DR and stained with Recinus communis agglutinin-1, which has been reported to bind specifically to brain microglia. In contrast, expression of lymphoid markers on cells with microglia-shaped morphology was remarkably diminished by PMA stimulation. Thus, the early lymphoid progenitor cells have the capacity to differentiate into cells with the morphological and antigenic properties of microglia cells. This system might be useful for further understanding of the characteristics and functions of microglia cells distributed in the central nerve system.
- Published
- 1993
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34. Detection of NG,NG-dimethylarginine dimethylaminohydrolase in the nitric oxide-generating systems of rats using monoclonal antibody.
- Author
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Kimoto M, Tsuji H, Ogawa T, and Sasaoka K
- Subjects
- Animals, Antibodies, Monoclonal, Antigen-Antibody Complex, Electrophoresis, Polyacrylamide Gel, Enzyme-Linked Immunosorbent Assay, Hydrolases analysis, Hydrolases immunology, Immunoblotting, Male, Molecular Weight, Organ Specificity, Rats, Rats, Wistar, Amidohydrolases, Hydrolases metabolism, Macrophages enzymology, Neutrophils enzymology, Nitric Oxide metabolism
- Abstract
In order to elucidate the biological role of NG,NG-dimethylarginine dimethylaminohydrolase (EC 3.5.3.18), we prepared monoclonal antibodies (mAbs) against the enzyme from rat kidney and examined the distribution of the enzyme in rats. Four mAbs have been obtained by the fusion of the spleen cells from BALB/c mouse immunized with the sodium dodecyl sulfate-denatured or native enzyme and P3X63Ag8U1 myeloma cells. All the mAbs were shown to bind to the denatured enzyme, but none of them could recognize the native enzyme. The occurrence of the enzyme protein in various rat tissues and cell systems such as peritoneal neutrophils and macrophages was examined using an immunoblotting technique with one of the mAbs. The immunoblotting analyses showed that the enzyme protein is widely distributed in rats, particularly, in kidney, pancreas, liver, brain, and aorta at high concentrations. Furthermore, the enzyme protein was clearly shown to exist in peritoneal neutrophils and macrophages. Since NG-monomethylarginine and NG,NG-dimethylarginine have been suggested to be specific blockers of the systems generating nitric oxide (NO), the above findings are of great interest in connection with the regulation of the NO production in such tissues and cell systems as aorta, brain, peritoneal neutrophils, and macrophages.
- Published
- 1993
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35. Dual effects of oleic acid on Ca2+ mobilization and protein phosphorylation in human platelets in presence or absence of platelet activating factor.
- Author
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Kimoto M, Javors MA, Ekholm J, Siafaka-Kapadai A, and Hanahan DJ
- Subjects
- Blood Platelets drug effects, Electrophoresis, Polyacrylamide Gel, Humans, In Vitro Techniques, Kinetics, Manganese blood, Molecular Weight, Oleic Acid, Phosphoproteins isolation & purification, Phosphorus Radioisotopes, Phosphorylation, Phosphotyrosine, Spectrometry, Fluorescence, Tyrosine analogs & derivatives, Tyrosine analysis, Blood Platelets metabolism, Blood Proteins metabolism, Calcium blood, Oleic Acids pharmacology, Phosphates blood, Phosphoproteins blood, Platelet Activating Factor pharmacology, Platelet Aggregation drug effects
- Abstract
This laboratory demonstrated earlier that oleic acid inhibited platelet activating factor (PAF)-induced aggregation and serotonin release of rabbit platelets (M. Miwa, C. Hill, R. Kumar, J. Sugatani, M. S. Olson, and D. J. Hanahan, 1987, J. Biol. Chem. 262, 527-530). More recently, we reported that oleic acid caused a decrease in phosphatidylinositol-4-phosphate (PIP) and phosphatidylinositol-4,5-bisphosphate (PIP2), but did not affect the level of inositol-1,4,5-trisphosphate (IP3), in rabbit platelets (D. Nunez, J. Randon, C. Gandhi, A. Siafaka-Kapadai, M. S. Olson, and D. J. Hanahan, 1990, J. Biol. Chem. 265, 18330-18838). These results suggested that oleic acid did not stimulate phospholipase C. In contrast, PAF induced a decrease in PIP2 and an increase in PIP level and IP3. These effects were shown to be attenuated by oleic acid. In this current study, our experiments show that (a) oleic acid blocked PAF-induced rise in intracellular [Ca2+] (to provide a mechanism in agreement with our previous experiments which showed that oleic acid inhibited PAF-induced IP3 rise in platelets) and (b) oleic acid itself induced a gradual rise in [Ca2+]i, which would provide a mechanism for oleic acid-induced aggregation despite the fact that oleic acid did not cause the production of IP3 (Nunez et al., 1990). Oleic acid, in a dose-dependent manner, was shown to inhibit PAF-induced Ca2+ mobilization from intra- and extracellular sources. The inhibition was closely related to the suppressive effect of oleic acid on PAF-induced aggregation. Furthermore, oleic acid inhibited the PAF-stimulated phosphorylation of the 20- and 40-kDa proteins. At concentrations above 20 microM, oleic acid itself could induce platelet aggregation and Ca2+ mobilization, but the time sequence of these two responses in human platelets was significantly different from those obtained with PAF. Oleic acid alone, at 20 microM, caused a 1.4-fold increase in the cAMP level in platelets which was followed by a decline to a basal value at higher concentrations of this fatty acid. It seemed clear that elevation of adenylate cyclase activity was not associated with free fatty acid inhibition of platelet activation. Interestingly, both PAF and oleic acid added separately to human platelets induced protein-tyrosine phosphorylation, but oleic acid did not cause any inhibition of PAF-induced protein-tyrosine phosphorylation.(ABSTRACT TRUNCATED AT 400 WORDS)
- Published
- 1992
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36. Prediction of outcome in fulminant hepatic failure by serum human hepatocyte growth factor.
- Author
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Tsubouchi H, Kawakami S, Hirono S, Miyazaki H, Kimoto M, Arima T, Sekiyama K, Yoshiba M, Arakaki N, and Daikuhara Y
- Subjects
- Hepatocyte Growth Factor, Humans, Predictive Value of Tests, Prognosis, Growth Substances blood, Hepatitis blood
- Published
- 1992
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37. Cholesterol-lowering activity of various undigested fractions of soybean protein in rats.
- Author
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Sugano M, Goto S, Yamada Y, Yoshida K, Hashimoto Y, Matsuo T, and Kimoto M
- Subjects
- Animals, Bile Acids and Salts metabolism, Cholesterol analysis, Dietary Proteins metabolism, Lipids analysis, Lipids blood, Liver analysis, Male, Methanol pharmacology, Plant Proteins metabolism, Rats, Rats, Inbred Strains, Saponins pharmacology, Triglycerides analysis, Triglycerides blood, Weight Gain, Cholesterol blood, Dietary Proteins pharmacology, Plant Proteins pharmacology, Glycine max
- Abstract
The undigested high-molecular-weight fraction (HMF) of soybean protein prepared after exhaustive digestion by microbial proteases significantly decreased serum cholesterol levels to approximately 45% (p less than 0.05) of those observed with the parent protein in rats fed diets containing cholesterol (0.5%) and sodium cholate (0.125%). HMF bound conjugated bile salts in vitro and significantly increased fecal excretion of both neutral and acidic steroids by 65-95% and 80-170% more, respectively (p less than 0.05), than did the intact protein. Extraction of HMF with methanol slightly decreased the activity, but the methanol-soluble fraction was not regarded as a principal determinant. Soybean saponin at the dietary level equivalent to that contained in HMF did not effectively lower serum cholesterol. The activity was not necessarily duplicated even when methanol-treated fractions were recombined. Further degradation of the methanol-extracted HMF by various proteases resulted in loss of activity. HMF obtained after pepsin digestion exerted a potential similar to that of HMF prepared after digestion by microbial proteases.
- Published
- 1990
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38. Membrane-bound lipoxygenase of rat cerebral microvessels.
- Author
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Baba A, Kimoto M, Tatsuno T, Inoue T, and Iwata H
- Subjects
- Animals, Arachidonate Lipoxygenases, Blood Platelets enzymology, Capillaries enzymology, Cytosol enzymology, Male, Membranes enzymology, Rats, Rats, Inbred Strains, Cerebrovascular Circulation, Lipoxygenase metabolism
- Abstract
The microvessels isolated from rat cerebral cortex has arachidonate lipoxygenase activity, which was not due to possible contamination of the platelets. The major product was identified to be 12-hydroxyeicosatetraenoic acid. After homogenization and sonication of the microvessel preparations, the lipoxygenase activity was recovered both in the membrane- and the cytosol-fractions, whereas that in the platelets was recovered in the cytosol fraction. Membrane-bound lipoxygenase of the microvessels has apparent Km value of 3.8 microM for arachidonic acid, which was corresponded to 1/5 of that in the platelet enzyme. Microvessel lipoxygenase was inhibited by nordihydroguaiaretic acid but not by indomethacin.
- Published
- 1985
- Full Text
- View/download PDF
39. Effect of 1-aminoproline on methionine metabolism in rats.
- Author
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Kimoto M, Ogawa T, and Sasaoka K
- Subjects
- Animals, Cystathionine analogs & derivatives, Cystathionine urine, Homocysteine analogs & derivatives, Homocysteine urine, Male, Proline pharmacology, Rats, Stereoisomerism, Sulfoxides urine, Methionine metabolism, Proline analogs & derivatives
- Published
- 1981
- Full Text
- View/download PDF
40. A convenient method for the determination of the optical configuration of cystathionine.
- Author
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Ogawa T, Kimoto M, and Sasaoka K
- Subjects
- Amino Acids analysis, Animals, Chromatography methods, Molecular Conformation, Oxidation-Reduction, Rats, Stereoisomerism, Sulfur, Cystathionine analysis
- Published
- 1980
- Full Text
- View/download PDF
41. Measurement of vitamin K in human liver by gradient elution high-performance liquid chromatography using platinum-black catalyst reduction and fluorimetric detection.
- Author
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Usui Y, Nishimura N, Kobayashi N, Okanoue T, Kimoto M, and Ozawa K
- Subjects
- Catalysis, Chromatography, High Pressure Liquid, Humans, Mitochondria, Liver analysis, Oxidation-Reduction, Platinum, Spectrometry, Fluorescence, Vitamin K 1 analysis, Liver analysis, Vitamin K analysis
- Abstract
A sensitive and precise method for measuring endogenous phylloquinone (K1) and menaquinone (MK-n) in human liver was developed, based on gradient elution high-performance liquid chromatography using platinum-black catalyst reduction and fluorimetric detection. Subnanogram levels of vitamin K compounds in 1 g of liver specimen were detectable. We measured vitamin K concentrations in 38 human resected livers. K1 and MK-4 to MK-13 were detected. The concentrations of MK-10 to MK-12 in livers with chronic hepatitis (n = 10) and cirrhosis (n = 22) were significantly lower than in normal livers (n = 6). It is suggested that the decreased concentrations indicate functional damage of the hepatocytes.
- Published
- 1989
- Full Text
- View/download PDF
42. Occurrence of a new enzyme catalyzing the direct conversion of NG,NG-dimethyl-L-arginine to L-citrulline in rats.
- Author
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Ogawa T, Kimoto M, and Sasaoka K
- Subjects
- Animals, Arginine metabolism, Female, Hydrolases metabolism, Mass Spectrometry, Rats, Rats, Inbred Strains, Amidohydrolases, Arginine analogs & derivatives, Citrulline biosynthesis, Hydrolases isolation & purification, Kidney enzymology
- Abstract
An enzyme concerned with the degradation of NG,NG-dimethyl-L-arginine to L-citrulline was investigated in rats. The enzyme purified from rat kidney catalyzed the direct conversion of NG,NG-dimethyl-L-arginine to L-citrulline with liberation of dimethylamine from the methylated guanidino moiety. The reaction required no co-factor and the maximum activity was obtained at pH 6.5. The enzyme was highly specific for NG,NG-dimethyl-L-arginine.
- Published
- 1987
- Full Text
- View/download PDF
43. Metabolism of NG,NG-and NG,N'G-dimethylarginine in rats.
- Author
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Ogawa T, Kimoto M, Watanabe H, and Sasaoka K
- Subjects
- Animals, Arginine metabolism, Arginine urine, Carbon Dioxide metabolism, Gas Chromatography-Mass Spectrometry, Isomerism, Rats, Tissue Distribution, Arginine analogs & derivatives
- Abstract
The metabolic fates of NG,NG-and NG,N'G-dimethylarginines in rats were investigated isotopically and novel metabolites, alpha-keto-delta-(N,N-dimethylguanidino)-and alpha-keto-delta-(N,N'-dimethylguanidino)valeric acids and gamma-(N,N-dimethylguanidino)-and gamma-(N,N'-dimethylguanidino)butyric acids were identified. In the case of the rats injected with NG,NG-dimethyl-L-[1,2,3,4,5-14C]arginine, about 13% of the radioactivity was recovered in the first 12-h urine and was distributed in the following metabolites (relative ratios): unchanged NG,NG-dimethyl-L-arginine (35.2%), gamma-(N,N-dimethylguanidino)butyric acid (18.4%), alpha-keto-delta-(N,N-dimethylguanidino)valeric acid (16.4%), and N alpha-acetyl-NG,NG-dimethyl-L-arginine (8.5%). The radioactivity retained in the tissues was found mainly in citrulline and was further distributed in ornithine, arginine, and glutamic acid and even in protein-bound arginine. In the case of NG,N'G-dimethyl-L-[1,2,3,4,5-14C]arginine-injected rats, about 75% of the radioactivity was excreted in the first 12-h urine and was recovered in the following metabolites (relative ratios): N alpha-acetyl-NG,N'G-dimethyl-L-arginine (48.4%), unchanged NG,N'G-dimethyl-L-arginine (23.7%), alpha-keto-delta-(N,N'-dimethylguanidino)valeric acid (20.2%), and gamma-(N,N'-dimethylguanidino)butyric acid (9.6%). In the tissues, most of the radioactivity was associated with unchanged NG,N'G-dimethyl-L-arginine. These findings show that both dimethylarginines are metabolized by a pathway forming the corresponding alpha-ketoacid analogs and the oxidatively decarboxylated products of the alpha-ketoacids in addition to the N alpha-acetyl conjugates identified previously (K. Sasaoka, T. Ogawa, and M. Kimoto (1982) Arch. Biochem. Biophys. 219, 454-458), and NG,NG-dimethyl-L-arginine is catabolized by an additional pathway leading to the formation of citrulline and its metabolically related amino acids. By considering their catabolism, an attempt to use urinary dimethylarginines as an index of in vivo breakdown of tissue proteins is invalid at least in rats.
- Published
- 1987
- Full Text
- View/download PDF
44. N-Acetyl conjugates of basic amino acids newly identified in rat urine.
- Author
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Sasaoka K, Ogawa T, and Kimoto M
- Subjects
- Acetylation, Animals, Chromatography, Thin Layer, Mass Spectrometry, Rats, Rats, Inbred Strains, Structure-Activity Relationship, Amino Acids, Diamino urine
- Published
- 1982
- Full Text
- View/download PDF
45. The hypocholesterolemic action of the undigested fraction of soybean protein in rats.
- Author
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Sugano M, Yamada Y, Yoshida K, Hashimoto Y, Matsuo T, and Kimoto M
- Subjects
- Animals, Body Weight drug effects, Caseins pharmacology, Cholesterol blood, Feces analysis, Liver anatomy & histology, Liver drug effects, Liver metabolism, Male, Molecular Weight, Organ Size drug effects, Peptide Hydrolases, Rats, Rats, Inbred Strains, Reference Values, Soybean Proteins, Glycine max, Steroids analysis, Anticholesteremic Agents pharmacology, Cholesterol metabolism, Dietary Proteins pharmacology, Plant Proteins, Dietary pharmacology
- Abstract
Soybean protein was exhaustively digested with endo- and exo-type microbial proteases and the effect of the digestible low molecular fraction (LMF) and the undigested high molecular fraction (HMF) on the serum cholesterol level was compared to that of the intact protein in rats given a cholesterol-enriched diet. The HMF, peptides relatively abundant in hydrophobic amino acids, was found to be substantially hypocholesterolemic when fed at the nitrogen level equivalent to that of the 20% soybean protein diet, and not only serum but also liver cholesterol levels were similar to those usually encountered in rats given diets free of cholesterol. There was a dose-dependent reduction of serum and liver cholesterol when casein was replaced stepwise with HMF. The cholesterol-lowering action could be attributable to an increased fecal steroid excretion.
- Published
- 1988
- Full Text
- View/download PDF
46. Distribution of protein-bound zinc in serum of analbuminemic rat.
- Author
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Shiraishi N, Yamamoto H, Kimoto M, Shiragami T, Togami I, Niiya H, and Aono K
- Subjects
- Animals, Chromatography, Affinity, Chromatography, Gel, Electrophoresis, Polyacrylamide Gel, Rats, Rats, Inbred Strains, Zinc blood, Carrier Proteins blood, Serum Albumin deficiency
- Abstract
The distribution of protein-bound zinc in serum of rat with analbuminemia was analyzed with gel filtration and affinity chromatography. From the profiles of chromatography, the zinc present in analbuminemic rat serum is composed of two principal species in similar to that of Sprague-Dawley rat: one fraction is firmly bound to alpha 2-macroglobulin, and a second fraction is more loosely bound to various proteins.
- Published
- 1984
- Full Text
- View/download PDF
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