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The introduction and proliferation of pathogenic organisms in aquatic systems is a serious global issue that consequently leads to economic, financial, and health concerns. Health and safety related to recreational water use is typically monitored through water quality assessments that are outdated and can be misleading. These traditional methods focus on broad taxa groups, provide no insight into the active community or source of contamination, and the sediment compartments (bed and suspended) are often overlooked. To bridge this knowledge gap, our study aimed to 1) examine the metatranscriptome of the microbial community associated with suspended sediment (SS) in freshwater systems; 2) explore the influence of SS in tributaries to the littoral zone of the receiving lake; and 3) compare the SS fraction with previously reported nearshore bed sediment data. Samples were collected seasonally from Lake St. Clair and Lake Erie. Beaches in this region are influenced by both agriculture runoff and continued urban expansion. Results show that both adjacent tributary and beach SS have similar microbial functional diversity and are strongly correlated by site and season. We identified expression of transcripts encoding sequences with similarities to genes involved in nine bacterial infectious disease pathways, including legionellosis (sdhA) and Vibrio cholerae pathogenesis. According to MG-RAST gene categories, lake samples typically showed higher overall expression (p < 0.05) of transcripts with similarities to genes involved in infectious disease pathways compared to the tributaries, with summer upregulated (p < 0.05) compared to fall. Our data suggests SS acts as a strong vector for pathogen transport, making this facet an important area for further research as it pertains to human health regarding recreational water use. To our knowledge, this work is the first to investigate SS in aquatic microbial communities using metatranscriptomic analyses and has significant potential to help address growing issues of microbial contamination impacting freshwater security., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)

This paper investigated the sediment/contaminant continuum of bitumen containing sediment, from eroded exposed natural bitumen outcrops to river depositional zone, in order to improve our understanding of the transitional sediment, chemistry and toxicological influence on aquatic health. To achieve this aim, we linked a rainfall simulator with an annular flume to allow for connectivity between terrestrial erosion to stream flow. Bulk sediments were collected from the minable McMurray Formation (MF) on the Ells (EL) and Steepbank (STB) Rivers and from the Clearwater Formation (CF) on the STB. All plots generated similar washoff rates (~25 L hr -1 ) and fine eroded sediment (d 50  = 5 μm) regardless of strata. The CF generated the highest total eroded sediment (TES) followed by EL-MF and STB-MF. The STB-MF generated up to three orders of magnitude lower TES than the STB-CF. The EL generated the highest PAH concentrations, however, when normalizing by TES mass delivered to the flume, STB-MF PAH was one to two orders of magnitude higher per unit mass than EL-MF. The TES concentrations were inversely proportional to the degree of bitumen within the sediment (STB-MF > EL-MF > STB-CF). Once the TES was suspended in the flume, there was a change in the dominant PAH for most classes [e.g., Dibenzothiophenes C4 (parent material) to a C3 (TES)]. Further, no flocculation and the buoyant properties of the TES suggested that the sediment and associated PAHs may travel long distances. The EL-MF proved to be the most toxic to fathead minnow embryo survival due principally to the high PAH concentrations and sediment loads. The CF exhibited no toxicological effect. This work has shown the importance of assessing sediment/contaminant characteristics over the continuum (terrestrial erosion/washoff to river deposition) in order to support basin wide management strategies for the protection of aquatic health., (Crown Copyright © 2019. Published by Elsevier B.V. All rights reserved.)

The success and sustainability of aquatic ecosystems are driven by the complex, cooperative metabolism of microbes. Ecological engineering strategies often strive to harness this syntrophic synergy of microbial metabolism for the reclamation of contaminated environments worldwide. Currently, there is a significant knowledge gap in our understanding of how the natural microbial ecology overcomes thermodynamic limitations in recovering contaminated environments. Here, we used in-situ metatranscriptomics and associated metataxonomic analyses on sediments collected from naturalized freshwater man-made reservoirs within the Athabasca Oil Sands region of Alberta, Canada. These reservoirs are unique since they are untouched by industrial mining processes and serve as representative endpoints for model landscape reconstruction. Results indicate that a microbial syntrophic cooperation has been established represented by the oxygenic and anoxygenic phototrophs, sustained through the efficient use of novel cellular mechanistic adaptations tailored to these unique thermodynamic conditions. Specifically, chemotaxis transcripts (cheY & MCPs-methyl-accepting chemotaxis proteins) were highly expressed, suggesting a highly active microbial response to gradients in environmental stimuli, resulting indirectly from hydrocarbon compound alteration. A high expression of photosynthetic activity, likely sustaining nutrient delivery to the similarly highly expressed methanogenic community acting in syntrophy during the breakdown of organics. Overall the more diversified functionality within sub-oxic sample locations indicates an ability to maintain efficient metabolism under thermodynamic constraints. This is the first study to holistically identify and characterize these types of in-situ, metabolic processes and address their thermodynamic feasibility within a global context for large landscape reconstruction. These characterizations of regional, natural landscapes surrounding the oil sands mining operation are severely lacking, but truly provide invaluable insight into end-point goals and targets for reclamation procedures., (Copyright © 2019 Elsevier B.V. All rights reserved.)

Within the Oil-Sands industry in Alberta, Canada, tailings ponds are used as water recycling and tailings storage facilities (TSF) for mining activities. However, there could be possible circumstances under which a sudden breach of an embankment confining one of the TSFs may occur. Such a tailings pond breach would result in a sudden release of a huge volume of Oil Sands process-affected water (OSPW) and sediment slurry containing substantial amount of chemical constituents that would follow the downstream drainage paths and subsequently enter into the Lower Athabasca River (LAR). This study investigates the implications of OS tailings release on the water and sediment quality of the LAR by simulating the fate of sediment and associated chemicals corresponding to a hypothetical breach and release scenarios from a select set of tailings ponds using a two-dimensional hydrodynamic and constituent transport model. After predicting the total volume, time evolution and concentration of sediment and associated chemicals (metals, polycyclic aromatic hydrocarbons (PAHs) and naphthenic acids (NAs)) reaching the LAR, the transport and deposition of these materials within the study reach is simulated. The results show that, depending on tailings release locations, between 40 and 70% of the sediment and associated chemicals get deposited onto the river bed of the 160 km study reach while the rest leaves the study domain during the first three days following the release event. These sediment/chemicals deposited during the initial spill may also have long-term effects on the water quality and aquatic ecosystem of the river and the downstream delta. However, care has to be taken in interpreting the results as further analysis has shown that the outcomes of such model simulations are very sensitive to the various underlying assumptions as well as the values assigned to some model parameters representing the physical properties of the tailings material., (Crown Copyright © 2018. Published by Elsevier B.V. All rights reserved.)

Bitumen-bearing suspended sediment (SS) eroded from the McMurray Formation (MF) are fine grained (silts and clays) and coated with natural hydrophobic oils. This results in poor settling and long range transport of associated contaminants. There was a longitudinal increase in polycyclic aromatic compound (PAC) concentrations for rivers that erode the MF from upstream to downstream regardless of time-of-year, while loads were substantially increased during high flow periods when the erosive forces are the greatest and the overland flow contribution is high. Within the MF, variation in PAC contributions is seen by the Ells River having higher loads than the Steepbank River. Using the Ells and Steepbank as examples, double plot PACs ratios suggest that the PAC concentrations and signatures vary spatially within the MF but that the weathering processes may be the same. Plots of the various homologs of PACs generally illustrated a normal distribution which suggests petrogenic origins. However, several PAC ratios suggested that both the parent material and the SS are pyrogenic in nature. While it is likely that some level of atmospheric deposition (anthropogenic or from forest fire) is incorporated into the SS of the rivers, it is likely to be limited relative to the proportion of naturally eroded MF sediments. Additional analysis will be needed to distinguish the relative risk of both anthropogenic (e.g., industrial operations) and natural sources (bitumen deposits, forest fire) of PACs to the SS and to long-range depositional environments, as they may have potential aquatic ecological effects., (Crown Copyright © 2018. Published by Elsevier B.V. All rights reserved.)

Experiments were conducted in an annular flume using a commercially available kaolinite clay as well as contaminated bed sediment from Hamilton Harbour (Ontario) to assess their stability against erosion. Critical shear stress for erosion was measured under different conditions of bed formation (quiescently deposited beds and shear deposited beds) as well as with and without the presence of a biostabilized bed. Results suggest that a biostabilized bed and a bed formed under a flowing condition, similar to a river scenario, will be more resistant against erosion than will a non-biostabilized bed and a bed formed under quiescent conditions. Up to three cycles of erosion and flocculation/deposition were observed to occur within one experiment. These results suggest that the depositional history and biostabilization of river bed sediments need to be seriously considered within sediment and contaminant transport models if meaningful estimates of sediment and contaminant source, fate and effect are to be generated and used for the management of our aquatic ecosystems.