Search

Diatoms are important organisms in freshwater ecosystems due to their position as primary producers and therefore, analyzing their assemblages provides relevant information on ecosystem functioning. Diatoms have historically been identified based on morphological traits, which is time-consuming and requires well-trained specialists. Nevertheless, DNA barcoding offers an alternative approach to overcome some limitations of the morphological method. Here, we assess if both approaches are comparable methods to study patterns and mechanisms (including environmental filtering and dispersal limitation) of epiphytic diatom metacommunities using a comprehensive dataset from 22 Mediterranean ponds at different taxonomic resolutions. We used a fragment of rbcL barcode gene combined with High-Throughput Sequencing to infer diatom community composition. The overall degree of correspondence between both approaches was assessed by Procrustean rotation analysis and Procrustean randomization tests, whereas the role of local environmental variables and geographical distances was studied using a comprehensive combination of BIOENV, Mantel tests and distance-based redundancy analysis. Our results showed a relatively poor correspondence in the compositional variation of diatom metacommunity between both approaches. We speculate that the incompleteness of the reference database and the bioinformatics processing are the biases most likely affecting the molecular approach, whereas the limited counting effort and the presence of cryptic species are presumably the major biases related with the morphological method. On the other hand, variation in diatom community composition detected with both approaches was strongly related to the environmental template, which may be related with the narrow community-environment relationships in diatoms. Nevertheless, we found no significant relationship between compositional variation and geographical distances. Overall, our work shows the complementary nature of both approaches and highlights the importance of DNA metabarcoding to address empirical research questions of community ecology in freshwaters, especially once the reference databases include most genotypes of occurring taxa and bioinformatics biases are overcome., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)

Disentangling the relative role of species sorting and dispersal limitation in biological communities has become one of the main issues for community ecologists and biogeographers. In this study, we analysed a data set of epiphytic diatoms comprising 34 lakes from six European countries. This data set covers a relatively large latitudinal gradient to elucidate which processes are affecting the distribution of diatom communities on a broad spatial extent. Our results show strong environmental effects on the composition of the diatom communities, while the spatial factor effects were weak, emphasising that compositional variation was mainly due to species turnover. Our data support information from the literature that local abiotic factors are the main predictors controlling the compositional variation of diatom assemblages in European shallow lakes. More specifically, changes in species composition were driven mainly by nutrient content in Northern Europe, whereas lakes located in Southern Europe were more affected by conductivity and lake depth. Our results solve pending questions in the spatial ecology of diatoms by proving that species turnover is stronger than nestedness at any spatial scale, and give support to the use of epiphytic diatoms as biological indicators for shallow lakes., (Copyright © 2019 Elsevier B.V. All rights reserved.)

The possible effect of land uses and human-related geographic patterns (presence of roads and urban settlements) on chemical pollution was evaluated in the waters and sediments of fifty-three Mediterranean shallow lakes. The presence of fifty-nine pollutants (belonging to PAHs, insecticides and herbicides groups) was analysed in these lakes by GC-MS. The studied lakes had similar pollutant concentrations to other lakes worldwide. The distribution of the compounds between water and sediment compartments was strongly influenced by log K(ow) values (an average of 3.61 for compounds found in water and of 4.69 for compounds found in sediments). A multivariate analysis suggested that the concentration of PAHs in water could be related to agricultural activities and not related to local road traffic. When assessing nutrient levels in the lakes, it was observed that eutrophicated lakes [>300 μg L(-1) total phosphorus (TP)] appeared in areas affected by urban or industrial use (at least 2% urban use in a 1-km radius around the lake), whilst lakes with lower TP concentrations were placed in forest areas (60% of forest use in a 1-km radius); in addition, the aqueous concentrations of Σ(PAH) were lower in lakes with higher TP concentrations (>150 μg L(-1) TP), which could be related to the adsorption capacity of PAHs onto suspended matter which is present in mesotrophic and eutrophic lakes, thus being removed from the aqueous phase., (Copyright © 2015 Elsevier B.V. All rights reserved.)

The aim of this study was to examine the effects of climate, season and wastewater quality on contaminant removal efficiency of constructed wetlands implemented in Mediterranean and continental-Mediterranean climate region of Spain. To this end, two experimental horizontal subsurface flow constructed wetlands located in Barcelona and León (Spain) were compared. The two constructed wetland systems had the same experimental set-up. Each wetland had a surface area of 2.95 m(2), a water depth of 25 cm and a granular medium of D(60)=7.3 mm, and was planted with Phragmites australis. Both systems were designed in order to operate with a maximum organic loading rate of 6 g(DBO) m(-2) d(-1). Experimental systems operated with a hydraulic loading rate of 28.5 and 98 mm d(-1) in Barcelona and León, respectively. Total suspended solids, biochemical oxygen demand and ammonium mass removal efficiencies followed seasonal trends, with higher values in the summer (97.4% vs. 97.8%; 97.1% vs. 96.2%; 99.9% vs. 88.9%, in Barcelona and León systems, respectively) than in the winter (83.5% vs. 74.4%; 73.2% vs. 60.6%; 19% vs. no net removal for ammonium in Barcelona and León systems, respectively). During the cold season, biochemical oxygen demand and ammonium removal were significantly higher in Barcelona system than in León, as a result of higher temperature and redox potential in Barcelona. During the warm season, statistical differences were observed only for ammonium removal. Results showed that horizontal subsurface flow constructed wetland is a successful technology for both regions considered, even if winter seemed to be a critical period for ammonium removal in continental climate regions., (Copyright © 2012 Elsevier B.V. All rights reserved.)

Seven mesocosm-scale (1m(2)) constructed wetlands (CWs) of different configurations were operated outdoors for thirty-nine months under the same conditions to assess their ability to remove organic matter and nutrients from urban wastewaters. CWs differed in some design parameters, namely the presence of plants, the species chosen (i.e., Typha angustifolia or Phragmites australis), the flow configuration (i.e., surface flow or subsurface flow) and the presence/absence of a gravel bed. It was observed that, in general, removal efficiencies decreased with the aging of the system and that seasonality had a great influence on CWs. A comparison was made in order to figure out which kind of CW was more efficient for the removal of every pollutant in the long term. Planted systems were clearly better than unplanted systems even in winter. Efficiency differences among CWs were not extremely great, especially after a few years. However, some types of CWs were more adequate for the removal of certain pollutants. The effect of the aging on the main parameters involved in pollutant removal in CWs (temperature, pH, conductivity, dissolved oxygen concentration and redox potential) was assessed. The efficiency of CWs should not be evaluated based on short monitoring periods (1-2 years) after the start-up of the systems, but on longer periods., (Copyright © 2012 Elsevier B.V. All rights reserved.)

A combined constructed wetland formed by a facultative pond (FP), a surface flow wetland (SF) and a subsurface flow wetland (SSF) was studied from December 2004 until September 2005 in north-western Spain in order to evaluate their efficiency in the removal of pathogenic and indicator microorganisms and to determine their relationships. Microbial removal ranged from 78% for coliphages to over 99% for helminth eggs, depending on the treatment system. The highest removal of indicator bacteria (total coliforms, E. coli, faecal streptococci and Clostridium perfringens) occurred in the stabilization pond, reaching 84%, 96%, 89% and 78%, respectively. However, the greatest removal of protozoan pathogens (Cryptosporidium and Giardia) and coliphages was found in the SSF wetland, 98%, 97% and 94%, respectively. In contrast, the SF wetland was most efficient in the removal of pathogenic parasites when considering superficial removal rates. Seasonal differences in organism removal were not statistically significant during the study period. First-order removal rate constants ranged from 0.0027 to 0.71 m/d depending on the microorganism and type of wetland. Significant correlations were found between pathogenic parasites and faecal indicators in the influent of the treatment system but not in the other sampling points suggesting that such relations varied along the system due to the different survival rates of the microorganisms.