1. Validation of Interactions with Protein Phosphatase-1
- Author
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Mathieu Bollen and Aleyde Van Eynde
- Subjects
animal structures ,Immunoprecipitation ,Protein subunit ,fungi ,Phosphatase ,food and beverages ,Protein phosphatase 1 ,macromolecular substances ,Biology ,environment and public health ,[phosphorylase] phosphatase activity ,Biochemistry ,Interactor ,Binding site ,Peptide sequence - Abstract
Publisher Summary This chapter presents an overview of the techniques that are available to study the interaction of protein phosphatase 1 (PP1) with other proteins. Most interactors of PP1 are inhibitors of the phosphorylase phosphatase activity of the catalytic subunit. A simple phosphatase assay can give an independent indication that the studied polypeptide is indeed an interactor of PP1. It discusses another technique known as “PP1 overlays,” based on the binding of PP1 to interactors that are associated with PVDF-membranes. PP1 overlays can be used to demonstrate a direct interaction between PP1 and a putative interactor in a complex mixture of proteins. The binding between PP1 and its interactors can also be explored by pull-down experiments when one of the two components is fused to gluthathione S-transferase (GST), a protein that binds with high affinity to glutathione-agarose. An occasional problem with GST pull-down experiments is the high background, because of the nonspecific binding of the putative PP1 interactor to GST. Another classical approach to demonstrate an interaction between two proteins is their coimmunoprecipitation from cell extracts. Some other tools are described in the chapter to study the interaction between PP1 and associated polypeptides.
- Published
- 2003
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