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Rising atmospheric CO2 alters the ocean biochemistry in the process known as ocean acidification (OA). It influences biodiversity at different levels, including zooplankton, which is a key component of aquatic communities and plays a pivotal role in the structure and functioning of marine planktonic food webs as a major link between pelagic primary producers and planktivorous. The effect of OA on the fitness of individual zooplanktonic species has been reported by many studies mostly developed under laboratory conditions. In this context, this chapter reviews the OA effects on zooplankton and describes the potential of natural shallow-water CO2 vents as in situ laboratories. The impact on zooplankton assemblages is shown from a study in the North Atlantic (Azores islands) and the suitability of this area for future studies on marine organisms and ecosystems. Sites with naturally elevated CO2 conditions are described, including which variables and limitations must be considered. Results shown are highly relevant to improve our predictions of the responses of zooplankton to climate change stressors including OA. Future studies including long-term multigenerational exposure to multiple stressors (e.g. increased pCO2 and food shortage) are a priority to understand the adaptation capacity of common species and how the zooplankton communities will shift.