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The inferred subsurface oceans of the icy moons of Jupiter and Saturn, in particular Europa and Enceladus, may contain conditions suitable for life. Plumes of material have been detected from Enceladus and may also be present on Europa. These plumes could contain molecular signs of habitability that could be detected by mass spectrometers on orbiting spacecrafts, such as the upcoming Europa Clipper mission. However, these molecular markers may have degraded between their production and detection, for example by possible hydrothermalism in the subsurface ocean or by UV irradiation once carried into space by the plume. It is important to look at how the biosignatures degrade under different conditions as degradation processes need to be taken into account when analysing the data from life detection missions. We investigate how these two processes affect the mass spectral signals of terrestrial bacteria. Two cyanobacteria samples, Spirulina and Chlorella, were subjected to hydrothermal processing and UV irradiation. Hydrous pyrolysis was used to simulate hydrothermal degradation. Experiments were carried out for 24 or 72 hours at temperatures between 200 and 300 °C. The pyrolyzed contents were subsequently extracted and analysed with gas chromatography-mass spectrometry (GC-MS). UV irradiation was carried out in a vacuum chamber (10-2 mbar), using a 300 W short arc xenon lamp at UV to near infrared wavelengths (~250 – 800 nm). After UV irradiation, samples were analysed using pyrolysis-gas chromatography-mass spectrometry (Py-GC-MS). Our results show that hydrothermal processing of cyanobacteria affects the compound classes in different ways. Carbohydrate and protein components from the cyanobacteria were significantly affected, with phenol and indole derivatives detected. However, some of the biological fingerprint, such as straight-chain even numbered saturated fatty acids from lipid fragments, remain even at the harshest experimental conditions used in our study. This provides confidence that these diagnostic molecules could be used as fingerprints of biological materials on icy moons.