101 results on '"Koonin, Eugene V."'
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2. Natural history of eukaryotic DNA viruses with double jelly-roll major capsid proteins
3. Mriyaviruses: Small Relatives of Giant Viruses
4. The Cryptic Bacterial Microproteome
5. Defense systems and horizontal gene transfer in bacteria
6. Diversity, Origin and Evolution of the ESCRT Systems
7. Microbial diversity and ecological complexity emerging from environmental variation and horizontal gene transfer in a simple mathematical model
8. Unicellular life balances asymmetric allocation and repair of somatic damage representing the origin of r/K selection
9. Diversity of Bathyarchaeia viruses in metagenomes and virus-encoded CRISPR system components
10. DNA polymerase diversity reveals multiple incursions of Polintons during nematode evolution
11. CoCoNuTs: A diverse subclass of Type IV restriction systems predicted to target RNA
12. Distinct groups of RNA viruses associated with thermoacidophilic bacteria
13. Programmable RNA-guided endonucleases are widespread in eukaryotes and their viruses
14. Parallelized screening of virus accessory genes reveals diverse defense and counter-defense mechanisms
15. Widespread PRC barrel proteins play critical roles in archaeal cell division
16. Widespread CRISPR repeat-like RNA regulatory elements in CRISPR-Cas systems
17. Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail
18. Exaptation of inactivated host enzymes for structural roles in orthopoxviruses and novel protein folds revealed by protein structure modeling
19. Compensatory Relationship between Low Complexity Regions and Gene Paralogy in the Evolution of Prokaryotes
20. Coevolution of reproducers and replicators at the origin of life and the conditions for the origin of genomes
21. A family of novel immune systems targets early infection of nucleus-forming jumbo phages
22. RNA-triggered protein cleavage and cell death by the RNA-guided type III-E CRISPR-Cas nuclease-protease complex
23. Host Age Structure Defines Interactions with Pathogens: Grandparent Effect under Collaboration and Virulent Mutualism under Competition
24. Varidnaviruses in the human gut: a major expansion of the order Vinavirales
25. Conservation and evolution of the sporulation gene set in diverse members of the Firmicutes
26. Pervasive conditional selection of driver mutations and modular epistasis networks in cancer
27. Human pathogenic RNA viruses establish non-competing lineages by occupying independent niches
28. tRNA anticodon cleavage by target-activated CRISPR-Cas13a effector
29. Towards a Theory of Evolution as Multilevel Learning
30. Epistasis at the SARS-CoV-2 RBD Interface and the Propitiously Boring Implications for Vaccine Escape
31. Viruses of Asgard archaea
32. A Phylogenomic Framework for Charting the Diversity and Evolution of Giant Viruses
33. Insertions in SARS-CoV-2 genome caused by template switch and duplications give rise to new variants that merit monitoring
34. Alternating lysis and lysogeny is a winning strategy in bacteriophages due to Parrondo’s Paradox
35. Ongoing Adaptive Evolution and Globalization of Sars-Cov-2
36. A Ratio-Dependent Model of Replicator-Genetic Parasite Coevolution Demonstrates Instability of the Parasite-Free State
37. Non-essential ribosomal proteins in bacteria and archaea identified using COGs
38. Allosteric activation of SARS-CoV-2 RdRp by remdesivir triphosphate and other phosphorylated nucleotides
39. Substantial Impact of Post Vaccination Contacts on Cumulative Infections during Viral Epidemics
40. Evolution of Human Respiratory Virus Epidemics
41. CRISPRidentify: identification of CRISPR arrays using machine learning approach
42. Expanding diversity of Asgard archaea and the elusive ancestry of eukaryotes
43. Ongoing Global and Regional Adaptive Evolution of SARS-CoV-2
44. Phylogenetic evidence of headful packaging strategy in gene transfer agents
45. Thousands of previously unknown phages discovered in whole-community human gut metagenomes
46. Modified base-binding EVE and DCD Domains Implicated in the Origins of Programmed Cell Death and the piRNA Pathway
47. Evolution of regulatory signatures in primate cortical neurons at cell type resolution
48. Unique genomic features of crAss-like phages, the dominant component of the human gut virome
49. Punctuated equilibrium as the default mode of evolution of large populations on fitness landscapes dominated by saddle points in the weak-mutation limit
50. Prediction of the virus incubation period for COVID-19 and future outbreaks
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