1. Structural aspects of RimP binding on small ribosomal subunit from Staphylococcus aureus.
- Author
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Garaeva N, Fatkhullin B, Murzakhanov F, Gafurov M, Golubev A, Bikmullin A, Glazyrin M, Kieffer B, Jenner L, Klochkov V, Aganov A, Rogachev A, Ivankov O, Validov S, Yusupov M, and Usachev K
- Subjects
- RNA, Ribosomal, 16S analysis, RNA, Ribosomal, 16S metabolism, Scattering, Small Angle, Ribosome Subunits, Small, Bacterial chemistry, X-Ray Diffraction, Electron Spin Resonance Spectroscopy, Ribosomal Proteins chemistry, Ribosome Subunits, Small metabolism, Cryoelectron Microscopy, Staphylococcus aureus metabolism, Bacterial Proteins chemistry
- Abstract
Ribosome biogenesis is an energy-intense multistep process where even minimal defects can cause severe phenotypes up to cell death. Ribosome assembly is facilitated by biogenesis factors such as ribosome assembly factors. These proteins facilitate the interaction of ribosomal proteins with rRNA and correct rRNA folding. One of these maturation factors is RimP which is required for efficient 16S rRNA processing and 30S ribosomal subunit assembly. Here, we describe the binding mode of Staphylococcus aureus RimP to the small ribosomal subunit and present a 4.2 Å resolution cryo-EM reconstruction of the 30S-RimP complex. Together with the solution structure of RimP solved by NMR spectroscopy and RimP-uS12 complex analysis by EPR, DEER, and SAXS approaches, we show the specificity of RimP binding to the 30S subunit from S. aureus. We believe the results presented in this work will contribute to the understanding of the RimP role in the ribosome assembly mechanism., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2024
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