1. Multiple variants and a differential splicing pattern of kinectin in human hepatocellular carcinoma
- Author
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Xuewen Pang, Shan Wang, Ji-Run Peng, Ke-Jun Han, Hong Cheng Wang, Bin Liang, Yan-Rong Su, and Wei-Feng Chen
- Subjects
Adult ,Carcinoma, Hepatocellular ,DNA, Complementary ,Molecular Sequence Data ,Biology ,Biochemistry ,law.invention ,Exon ,Antigen ,Antigens, Neoplasm ,law ,Carcinoma ,medicine ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Base Sequence ,Reverse Transcriptase Polymerase Chain Reaction ,Immunogenicity ,Liver Neoplasms ,Alternative splicing ,Membrane Proteins ,Exons ,Cell Biology ,medicine.disease ,Virology ,Alternative Splicing ,Liver ,Hepatocellular carcinoma ,RNA splicing ,Cancer research ,Recombinant DNA ,Female - Abstract
To extend the search for hepatocellular carcinoma (HCC) associated antigens with immunogenicity for clinical applications, we constructed a cDNA expression library using resected human HCC tissue sample and screened it by serological analysis of recombinant cDNA expression library (SEREX) with autologous and allogeneic sera. A total of 24 distinct antigens were isolated and kinectin was the antigen most frequently identified. We found that kinectin was alternatively spliced at four sites and obtained all eight theoretical forms of variant, six by SEREX and two by RT-PCR, from the different splicing combinations of the last three sites. In addition, the splicing patterns of four sites were analyzed. Variant containing D2 was overexpressed in cancerous tissues and this alteration may be tumor associated. The four splicing sites, the variants generated by alternative splicing, and the humoral immune response in HCC patients, may help to analyze the role of kinectin in human HCC cell biology.Key words: alternative splicing, antibody response, hepatocellular carcinoma, kinectin, serological analysis of recombinant cDNA expression library (SEREX).
- Published
- 2004