17 results on '"Tanaka, Masashi"'
Search Results
2. Secondary structure of the human mitochondrial genome affects formation of deletions
- Author
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Shamanskiy, Victor, Mikhailova, Alina A., Tretiakov, Evgenii O., Ushakova, Kristina, Mikhailova, Alina G., Oreshkov, Sergei, Knorre, Dmitry A., Ree, Natalia, Overdevest, Jonathan B., Lukowski, Samuel W., Gostimskaya, Irina, Yurov, Valerian, Liou, Chia-Wei, Lin, Tsu-Kung, Kunz, Wolfram S., Reymond, Alexandre, Mazunin, Ilya, Bazykin, Georgii A., Fellay, Jacques, Tanaka, Masashi, Khrapko, Konstantin, Gunbin, Konstantin, and Popadin, Konstantin
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- 2023
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3. Grounds for surrogate decision-making in Japanese clinical practice: a qualitative survey
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Tanaka, Masashi, Ohnishi, Kayoko, Enzo, Aya, Okita, Taketoshi, and Asai, Atsushi
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- 2021
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4. Cross-sectional survey of surrogate decision-making in Japanese medical practice
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Tanaka, Masashi, Bito, Seiji, Enzo, Aya, Okita, Takethoshi, and Atsushi, Asai
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- 2021
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5. Iatrogenic acute aortic dissection caused by intervention for spontaneous coronary artery dissection: a surgical case report
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Hayashi, Yuki, Taoka, Makoto, Osaka, Shunji, Unosawa, Satoshi, and Tanaka, Masashi
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- 2020
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6. Canagliflozin for Japanese patients with chronic heart failure and type II diabetes
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Sezai, Akira, Sekino, Hisakuni, Unosawa, Satoshi, Taoka, Makoto, Osaka, Shunji, and Tanaka, Masashi
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- 2019
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7. Prevalence of frailty, cognitive impairment, and sarcopenia in outpatients with cardiometabolic disease in a frailty clinic.
- Author
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Tamura, Yoshiaki, Ishikawa, Joji, Fujiwara, Yoshinori, Tanaka, Masashi, Kanazawa, Nobuo, Chiba, Yuko, Iizuka, Ai, Kaito, Sho, Tanaka, Jun, Sugie, Masamitsu, Nishimura, Takashi, Kanemaru, Akiko, Shimoji, Keigo, Hirano, Hirohiko, Furuta, Ko, Kitamura, Akihiko, Seino, Satoshi, Shinkai, Shoji, Harada, Kazumasa, and Kyo, Shunei
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FRAGILITY (Psychology) ,DISABILITIES ,MORTALITY ,SARCOPENIA ,MILD cognitive impairment - Abstract
Background: Although frailty and cognitive impairment are critical risk factors for disability and mortality in the general population of older inhabitants, the prevalence and incidence of these factors in individuals treated in the specialty outpatient clinics are unknown.Methods: We recently established a frailty clinic for comprehensive assessments of conditions such as frailty, sarcopenia, and cognition, and planned 3-year prospective observational study to identify the risk factors for progression of these aging-related statuses. To date, we recruited 323 patients who revealed symptoms suggestive of frailty mainly from a specialty outpatient clinic of cardiology and diabetes. Frailty status was diagnosed by the modified Cardiovascular Health Study (mCHS) criteria and some other scales. Cognitive function was assessed by Mini-Mental State Examination (MMSE), Japanese version of the Montreal Cognitive Assessment (MoCA-J), and some other modalities. Sarcopenia was defined by the criteria of the Asian Working Group for Sarcopenia (AWGS). In this report, we outlined our frailty clinic and analyzed the background characteristics of the subjects.Results: Most patients reported hypertension (78%), diabetes mellitus (57%), or dyslipidemia (63%), and cardiovascular disease and probable heart failure also had a higher prevalence. The prevalence of frailty diagnosed according to the mCHS criteria, cognitive impairment defined by MMSE (≤27) and MoCA-J (≤25), and of AWGS-defined sarcopenia were 24, 41, and 84, and 31%, respectively. The prevalence of frailty and cognitive impairment increased with aging, whereas the increase in sarcopenia prevalence plateaued after the age of 80 years. No significant differences were observed in the prevalence of frailty, cognitive impairment, and sarcopenia between the groups with and without diabetes mellitus, hypertension, or dyslipidemia with a few exceptions, presumably due to the high-risk subjects who had multiple cardiovascular comorbidities. A majority of the frail and sarcopenic patients revealed cognitive impairment, whereas the frequency of suspected dementia among these patients were both approximately 20%.Conclusions: We found a high prevalence of frailty, cognitive impairment, and sarcopenia in patients with cardiometabolic disease in our frailty clinic. Comprehensive assessment of the high-risk patients could be useful to identify the risk factors for progression of frailty and cognitive decline. [ABSTRACT FROM AUTHOR]- Published
- 2018
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8. Small, smooth, nonmobile cardiac myxoma detected by transesophageal echocardiography following recurrent cerebral infarction: a case report.
- Author
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Yuki Saito, Yoshihiro Aizawa, Koyuru Monno, Koichi Nagashima, Sayaka Kurokawa, Shunji Osaka, Takayoshi Akimoto, Satoshi Kamei, Masashi Tanaka, Atsushi Hirayama, Saito, Yuki, Aizawa, Yoshihiro, Monno, Koyuru, Nagashima, Koichi, Kurokawa, Sayaka, Osaka, Shunji, Akimoto, Takayoshi, Kamei, Satoshi, Tanaka, Masashi, and Hirayama, Atsushi
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MYXOMA ,TRANSESOPHAGEAL echocardiography ,CEREBRAL infarction ,DISEASES in older people ,DIAGNOSIS - Abstract
Background: Cardiac myxoma is known to cause repeated events of cerebral embolism. Soft and irregularly shaped myxomas with high mobility are associated with a higher occurrence of cerebral embolism. In contrast, nonmobile cardiac myxomas with a round regular shape are rarely considered to be a cause of cerebral embolism. In this case, we present a patient with recurrent cerebral embolism associated with a small and nonmobile cardiac myxoma of round regular shape.Case Presentation: A 76-year-old Japanese man presented to our hospital with weakness in his right upper extremity. He had a history of right frontal lobe infarction in the previous month. T2-weighted magnetic resonance imaging revealed an area of hyperintensity in the left precentral gyrus, indicating acute cerebral infarction. Transthoracic echocardiography revealed normal left ventricular function and no abnormalities. However, transesophageal echocardiography showed a small and nonmobile left atrial tumor with round regular shape attached to the ostium secundum of the atrial septum. Based on these findings, we diagnosed recurrent cerebral infarction due to embolization caused by left atrial myxoma, and cardiac tumor extraction was performed on hospitalization day 36. The excised tumor measured 0.6 × 0.6 × 0.5 cm and was diagnosed as cardiac myxoma by histologic examination.Conclusions: Even small and nonmobile cardiac myxomas with a round regular shape may cause recurrent cerebral infarction. The diagnosis of this type of atrial myxoma is elusive and transesophageal echocardiography was an effective method of detection. In a clinical situation, this type of cardiac myxoma may be overlooked as a cause of cerebral infarction. [ABSTRACT FROM AUTHOR]- Published
- 2017
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9. Strong influence of dietary intake and physical activity on body fatness in elderly Japanese men: age-associated loss of polygenic resistance against obesity.
- Author
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Tanisawa, Kumpei, Ito, Tomoko, Sun, Xiaomin, Ise, Ryuken, Oshima, Satomi, Cao, Zhen-Bo, Sakamoto, Shizuo, Tanaka, Masashi, and Higuchi, Mitsuru
- Abstract
Genome-wide association studies identified single nucleotide polymorphisms (SNPs) associated with body mass index (BMI) in middle-aged populations; however, it is unclear whether these SNPs are associated with body fatness in elderly people. We examined the association between genetic risk score (GRS) from BMI-associated SNPs and body fatness in elderly Japanese men. We also examined the contribution of GRS, dietary macronutrient intake, and physical activity to body fatness by different age groups. GRS was calculated from 10 BMI-associated SNPs in 84 middle-aged (30-64 years) and 97 elderly (65-79 years) Japanese men; subjects were divided into low, middle, and high GRS groups. Dietary macronutrient intake was assessed using a questionnaire, and physical activity was evaluated using both a questionnaire and an accelerometer. The middle-aged individuals with a high GRS had greater BMI; waist circumference; and total abdominal fat, visceral fat, and subcutaneous fat areas than the middle-aged individuals with low GRS, whereas the indicators were not different between the GRS groups in elderly individuals. Multiple linear regression analysis showed that GRS was the strongest predictor of BMI, total abdominal fat, and visceral fat in the middle-aged group, whereas fat, alcohol, and protein intakes or vigorous-intensity physical activity were more strongly associated with these indicators than was GRS in the elderly group. These results suggest that GRS from BMI-associated SNPs is not predictive of body fatness in elderly Japanese men. The stronger contribution of dietary macronutrient intake and physical activity to body fatness may attenuate the genetic predisposition in elderly men. [ABSTRACT FROM AUTHOR]
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- 2014
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10. Establishment of a new method for precisely determining the functions of individual mitochondrial genes, using Dictyostelium cells.
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Chida, Junji, Amagai, Aiko, Tanaka, Masashi, and Maeda, Yasuo
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MITOCHONDRIA ,DICTYOSTELIUM ,GENES ,RIBOSOMES ,GENE expression - Abstract
Background: Disruption of mitochondrial genes may become a powerful tool for elucidating precisely the functions of individual mitochondrial genes. However, it is generally difficult to manipulate genetically mitochondrial genes, because 1) a mitochondrion is surrounded by inner and outer membranes, and 2) there are a large number of mtDNA copies in a single cell. This is the reason why we tried to establish a novel method for disrupting a certain mitochondrial gene (rps4), using Dictyostelium cells. Results: Here, we have developed a new method for specifically disrupting a mitochondrial gene (rps4; ribosomal protein subunit S4), by a combination of homologous recombination and delivery of an appropriate restriction endonuclease (SfoI) into mitochondria. First, mitochondrially targeted SfoI whose expression is under control of the tetracycline (Tet)-regulated gene expression system was introduced into cells heteroplasmic with respect to the rps4 gene. Then, the heteroplasmic cells were produced by homologous recombination by use of the construct in which the unique SfoI site and the 5'-half of the rps4 coding region were deleted not to be digested by SfoI, and therefore their mitochondria have both the wild-type mtDNA and the mutant mtDNA with the disrupted rps4 gene. In response to removal of Tet from growth medium, SfoI was selectively delivered into mitochondria and digested only the wild-type mtDNA but not the mutated rps4. Thus one can gain rps4-null cells with only the mutated mtDNA, under the Tet-minus condition. Conclusion: The mitochondrial gene-disruption method presented here must be widely useful for precisely determining the functions of individual mitochondrial genes. This is the first report to demonstrate complete and specific mitochondrial gene disruption. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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11. Hyperthermic treatment of DMBA-induced rat mammary cancer using magnetic nanoparticles.
- Author
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Motoyama, Jun, Yamashita, Noriyuki, Morino, Tomio, Tanaka, Masashi, Kobayashi, Takeshi, and Honda, Hiroyuki
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ANIMAL health ,ANIMAL experimentation ,CANCER treatment ,NANOPARTICLES ,THERAPEUTICS - Abstract
Background: We have developed magnetite cationic liposomes (MCLs) and applied them as a mediator of local hyperthermia. MCLs can generate heat under an alternating magnetic field (AMF). In this study, the in vivo effect of hyperthermia mediated by MCLs was examined using 7,12-dimethylbenz(a)anthracene (DMBA)-induced rat mammary cancer as a spontaneous cancer model. Method: MCLs were injected into the mammary cancer and then subjected to an AMF. Results: Four rats in 20 developed mammary tumors at more than 1 site in the body. The first-developed tumor in each of these 4 rats was selected and heated to over 43°C following administration of MCLs by an infusion pump. After a series of 3 hyperthermia treatments, treated tumors in 3 of the 4 rats were well controlled over a 30-day observation period. One of the 4 rats exhibited regrowth after 2 weeks. In this rat, there were 3 sites of tumor regrowth. Two of these regrowths were reduced in volume and regressed completely after 31 days, although the remaining one grew rapidly. These results indicated hyperthermia-induced immunological antitumor activity mediated by the MCLs. Conclusion: Our results suggest that hyperthermic treatment using MCLs is effective in a spontaneous cancer model. [ABSTRACT FROM AUTHOR]
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- 2008
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12. Gene Therapy for Mitochondrial Disease by Delivering Restriction Endonuclease SmaI into Mitochondria.
- Author
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Tanaka, Masashi, Borgeld, Harm-Jan, Jin Zhang, Muramatsu, Shin-ichi, Gong, Jian-Sheng, Yoneda, Makoto, Maruyama, Wakako, Naoi, Makoto, Ibi, Tohru, Sahashi, Ko, Shamoto, Masayo, Fuku, Noriyuki, Kurata, Miyuki, Yamada, Yoshiji, Nishizawa, Kumi, Akao, Yukihiro, Ohishi, Nobuko, Miyabayashi, Shigeaki, Umemoto, Hiraku, and Muramatsu, Tatsuo
- Subjects
- *
MITOCHONDRIAL pathology , *RETINITIS pigmentosa , *PIGMENTATION disorders , *RETINAL degeneration , *MUSCLE diseases , *ATAXIA , *GENE therapy - Abstract
The restriction endonuclease SmaI has been used for the diagnosis of neurogenic muscle weakness, ataxia and retinitis pigmentosa disease or Leigh’s disease, caused by the Mt8993T→G mutation which results in a Leu156Arg replacement that blocks proton translocation activity of subunit a of F[sub 0] F[sub 1] -ATPase. Our ultimate goal is to apply SmaI to gene therapy for this disease, because the mutant mitochondrial DNA (mtDNA) coexists with the wild-type mtDNA (heteroplasmy), and because only the mutant mtDNA, but not the wild-type mtDNA, is selectively restricted by the enzyme. For this purpose, we transiently expressed the SmaI gene fused to a mitochondrial targeting sequence in cybrids carrying the mutant mtDNA. Here, we demonstrate that mitochondria targeted by the SmaI enzyme showed specific elimination of the mutant mtDNA. This elimination was followed with repopulation by the wild-type mtDNA, resulting in restoration of both the normal intracellular ATP level and normal mitochondrial membrane potential. Furthermore, in vivo electroporation of the plasmids expressing mitochondrion-targeted EcoRI induced a decrease in cytochrome c oxidase activity in hamster skeletal muscles while causing no degenerative changes in nuclei. Delivery of restriction enzymes into mitochondria is a novel strategy for gene therapy of a special form of mitochondrial diseases.Copyright © 2002 National Science Council, ROC and S. Karger AG, Basel [ABSTRACT FROM AUTHOR]
- Published
- 2002
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13. Small, smooth, nonmobile cardiac myxoma detected by transesophageal echocardiography following recurrent cerebral infarction: a case report.
- Author
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Saito Y, Aizawa Y, Monno K, Nagashima K, Kurokawa S, Osaka S, Akimoto T, Kamei S, Tanaka M, and Hirayama A
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- Aged, Brain diagnostic imaging, Echocardiography, Transesophageal, Heart Atria diagnostic imaging, Heart Neoplasms diagnostic imaging, Heart Neoplasms pathology, Heart Neoplasms surgery, Humans, Magnetic Resonance Imaging, Male, Myxoma diagnostic imaging, Myxoma pathology, Myxoma surgery, Cerebral Infarction etiology, Heart Neoplasms complications, Myxoma complications
- Abstract
Background: Cardiac myxoma is known to cause repeated events of cerebral embolism. Soft and irregularly shaped myxomas with high mobility are associated with a higher occurrence of cerebral embolism. In contrast, nonmobile cardiac myxomas with a round regular shape are rarely considered to be a cause of cerebral embolism. In this case, we present a patient with recurrent cerebral embolism associated with a small and nonmobile cardiac myxoma of round regular shape., Case Presentation: A 76-year-old Japanese man presented to our hospital with weakness in his right upper extremity. He had a history of right frontal lobe infarction in the previous month. T2-weighted magnetic resonance imaging revealed an area of hyperintensity in the left precentral gyrus, indicating acute cerebral infarction. Transthoracic echocardiography revealed normal left ventricular function and no abnormalities. However, transesophageal echocardiography showed a small and nonmobile left atrial tumor with round regular shape attached to the ostium secundum of the atrial septum. Based on these findings, we diagnosed recurrent cerebral infarction due to embolization caused by left atrial myxoma, and cardiac tumor extraction was performed on hospitalization day 36. The excised tumor measured 0.6 × 0.6 × 0.5 cm and was diagnosed as cardiac myxoma by histologic examination., Conclusions: Even small and nonmobile cardiac myxomas with a round regular shape may cause recurrent cerebral infarction. The diagnosis of this type of atrial myxoma is elusive and transesophageal echocardiography was an effective method of detection. In a clinical situation, this type of cardiac myxoma may be overlooked as a cause of cerebral infarction.
- Published
- 2017
- Full Text
- View/download PDF
14. Gamma-glutamyltransferase activity in exosomes as a potential marker for prostate cancer.
- Author
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Kawakami K, Fujita Y, Matsuda Y, Arai T, Horie K, Kameyama K, Kato T, Masunaga K, Kasuya Y, Tanaka M, Mizutani K, Deguchi T, and Ito M
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- Antigens, Surface blood, Cell Line, Tumor, Exosomes enzymology, Gene Expression Regulation, Neoplastic, Glutamate Carboxypeptidase II blood, Humans, Male, Prostatic Hyperplasia pathology, Prostatic Neoplasms enzymology, Prostatic Neoplasms pathology, Biomarkers, Tumor blood, Prostatic Hyperplasia blood, Prostatic Neoplasms blood, gamma-Glutamyltransferase blood
- Abstract
Background: Exosomes or extracellular vesicles have the potential as a diagnostic marker for various diseases including cancer. In order to identify novel exosomal markers for prostate cancer (PC), we performed proteomic analysis of exosomes isolated from PC cell lines and examined the usefulness of the marker in patients., Methods: Exosomes isolated by differential centrifugation from the culture medium of androgen-dependent LNCaP prostate cancer cell line and its sublines of partially androgen-independent C4, androgen-independent C4-2 and bone metastatic C4-2B were subjected to iTRAQ-based proteomic analysis. Exosomes were also isolated by immunocapture and separated by size exclusion chromatography and density gradient centrifugation. Protein expression was determined by Western blot analysis. GGT activity was measured using a fluorescent probe, γ-glutamyl hydroxymethyl rhodamine green (gGlu-HMRG). Immunohistochemical analysis of tissues was performed using anti-GGT1 antibody., Results: Among proteins upregulated in C4-2 and C4-2B cells than in LNCaP cells, we focused on gamma-glutamyltransferase 1 (GGT1), a cell-surface enzyme that regulates the catabolism of extracellular glutathione. The levels of both GGT1 large and small subunits were elevated in exosomes isolated from C4-2 and C4-2B cells by differential centrifugation and by immunocapture with anti-CD9 or -prostate-specific membrane antigen (PSMA) antibody. In cell lysates and exosomes, GGT1 expression correlated with GGT activity. Size exclusion chromatography of human serum demonstrated the presence of GGT activity and GGT1 subunits in fractions positive for CD9. Density gradient centrifugation revealed the co-presence of GGT1 subunits with CD9 in exosomes isolated by differential centrifugation from human serum. Since GGT activity correlated with GGT1 expression in serum exosomes isolated by differential centrifugation, we measured serum exosomal GGT activity in patients. Unexpectedly, we found that serum exosomal GGT activity was significantly higher in PC patients than in benign prostatic hyperplasia (BPH) patients. In support of this finding, immunohistochemical analysis showed increased GGT1 expression in PC tissues compared with BPH tissues., Conclusions: Our results suggest that serum exosomal GGT activity could be a useful biomarker for PC.
- Published
- 2017
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15. Associations between the orexin (hypocretin) receptor 2 gene polymorphism Val308Ile and nicotine dependence in genome-wide and subsequent association studies.
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Nishizawa D, Kasai S, Hasegawa J, Sato N, Yamada H, Tanioka F, Nagashima M, Katoh R, Satoh Y, Tagami M, Ujike H, Ozaki N, Inada T, Iwata N, Sora I, Iyo M, Yamada M, Kondo N, Won MJ, Naruse N, Uehara-Aoyama K, Itokawa M, Ohi K, Hashimoto R, Tanisawa K, Arai T, Mori S, Sawabe M, Naka-Mieno M, Yamada Y, Yamada M, Sato N, Muramatsu M, Tanaka M, Irukayama-Tomobe Y, Saito YC, Sakurai T, Hayashida M, Sugimura H, and Ikeda K
- Subjects
- Abdomen surgery, Adolescent, Adult, Aged, Aged, 80 and over, Asian People genetics, Autopsy, Female, Genetic Loci, Goiter genetics, Humans, Male, Methamphetamine, Middle Aged, Pain, Postoperative etiology, Pain, Postoperative genetics, Physical Chromosome Mapping, Reproducibility of Results, Schizotypal Personality Disorder genetics, Young Adult, Genetic Predisposition to Disease, Genome-Wide Association Study, Orexin Receptors genetics, Polymorphism, Single Nucleotide genetics, Tobacco Use Disorder genetics
- Abstract
Background: Many genetic and environmental factors are involved in the etiology of nicotine dependence. Although several candidate gene variations have been reported by candidate gene studies or genome-wide association studies (GWASs) to be associated with smoking behavior and the vulnerability to nicotine dependence, such studies have been mostly conducted with subjects with European ancestry. However, genetic factors have rarely been investigated for the Japanese population as GWASs. To elucidate genetic factors involved in nicotine dependence in Japanese, the present study comprehensively explored genetic contributors to nicotine dependence by using whole-genome genotyping arrays with more than 200,000 markers in Japanese subjects., Results: The subjects for the GWAS and replication study were 148 and 374 patients, respectively. A two-stage GWAS was conducted using the Fagerström Test for Nicotine Dependence (FTND), Tobacco Dependence Screener (TDS), and number of cigarettes smoked per day (CPD) as indices of nicotine dependence. For the additional association analyses, patients who underwent major abdominal surgery, patients with methamphetamine dependence/psychosis, and healthy subjects with schizotypal personality trait data were recruited. Autopsy specimens with various diseases were also evaluated. After the study of associations between more than 200,000 marker single-nucleotide polymorphisms (SNPs) and the FTND, TDS, and CPD, the nonsynonymous rs2653349 SNP (located on the gene that encodes orexin [hypocretin] receptor 2) was selected as the most notable SNP associated with FTND, with a p value of 0.0005921 in the two-stage GWAS. This possible association was replicated for the remaining 374 samples. This SNP was also associated with postoperative pain, the initiation of methamphetamine use, schizotypal personality traits, and susceptibility to goiter., Conclusions: Although the p value did not reach a conventional genome-wide level of significance in our two-stage GWAS, we obtained significant results in the subsequent analyses that suggest that the rs2653349 SNP (Val308Ile) could be a genetic factor that is related to nicotine dependence and possibly pain, schizotypal personality traits, and goiter in the Japanese population.
- Published
- 2015
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16. Pathological similarities between low birth weight-related nephropathy and nephropathy associated with mitochondrial cytopathy.
- Author
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Imasawa T, Tanaka M, Maruyama N, Kawaguchi T, Yamaguchi Y, Rossignol R, Kitamura H, and Nishimura M
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- Adult, DNA, Mitochondrial chemistry, DNA, Mitochondrial genetics, Female, Humans, Infant, Low Birth Weight, Infant, Newborn, Kidney Glomerulus pathology, Male, Middle Aged, Mutation, Proteinuria, Retrospective Studies, Sequence Analysis, DNA, Glomerulosclerosis, Focal Segmental pathology, Kearns-Sayre Syndrome pathology, Mitochondrial Myopathies pathology
- Abstract
Background: Individuals born with a low birth weight (LBW) have a higher risk of developing kidney dysfunction during their lifetime and sometimes exhibit focal segmental glomerulosclerosis (FSGS) lesions in their glomeruli. We herein try to obtain other pathological characteristics of LBW-related nephropathy., Methods: We retrospectively evaluated the renal pathology of four patients demonstrating FSGS with a history of LBW. Two mitochondrial cytopathy patients were also analyzed. DNA mutations were surveyed using a PCR-Luminex assay., Results: In all four FSGS patients with a history of LBW, focal segmental glomerulosclerosis were detected. Interestingly, granular swollen epithelial cells (GSECs), which have previously been reported exclusively in patients with mitochondrial cytopathy, were also observed in the distal tubules and/or collecting ducts of all four patients with a history of low birth weight in this study. Electron microscopy revealed that these granular swollen epithelial cells included an increased number of enlarged mitochondria. Furthermore, cytochrome c oxidase subunit IV staining of patients with a history of low birth weight and patients with mitochondrial DNA mutations showed unbalanced expression patterns in glomeruli and a part of tubular cells. However, no mitochondrial gene mutations were detected in any of our four patients with low birth weight-related nephropathy., Conclusions: This is the first report to show the pathological similarities not only in glomeruli but also tubuli between nephropathy with a LBW history and nephropathy with mitochondrial cytopathy., Virtual Slides: The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/13000_2014_181.
- Published
- 2014
- Full Text
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17. Exome sequencing of senescence-accelerated mice (SAM) reveals deleterious mutations in degenerative disease-causing genes.
- Author
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Tanisawa K, Mikami E, Fuku N, Honda Y, Honda S, Ohsawa I, Ito M, Endo S, Ihara K, Ohno K, Kishimoto Y, Ishigami A, Maruyama N, Sawabe M, Iseki H, Okazaki Y, Hasegawa-Ishii S, Takei S, Shimada A, Hosokawa M, Mori M, Higuchi K, Takeda T, Higuchi M, and Tanaka M
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Exons genetics, Humans, Membrane Proteins chemistry, Membrane Proteins genetics, Mice, Molecular Sequence Data, Phenotype, Species Specificity, Aging genetics, Disease genetics, Exome genetics, Genomics, Mutation genetics, Sequence Analysis
- Abstract
Background: Senescence-accelerated mice (SAM) are a series of mouse strains originally derived from unexpected crosses between AKR/J and unknown mice, from which phenotypically distinct senescence-prone (SAMP) and -resistant (SAMR) inbred strains were subsequently established. Although SAMP strains have been widely used for aging research focusing on their short life spans and various age-related phenotypes, such as immune dysfunction, osteoporosis, and brain atrophy, the responsible gene mutations have not yet been fully elucidated., Results: To identify mutations specific to SAMP strains, we performed whole exome sequencing of 6 SAMP and 3 SAMR strains. This analysis revealed 32,019 to 38,925 single-nucleotide variants in the coding region of each SAM strain. We detected Ogg1 p.R304W and Mbd4 p.D129N deleterious mutations in all 6 of the SAMP strains but not in the SAMR or AKR/J strains. Moreover, we extracted 31 SAMP-specific novel deleterious mutations. In all SAMP strains except SAMP8, we detected a p.R473W missense mutation in the Ldb3 gene, which has been associated with myofibrillar myopathy. In 3 SAMP strains (SAMP3, SAMP10, and SAMP11), we identified a p.R167C missense mutation in the Prx gene, in which mutations causing hereditary motor and sensory neuropathy (Dejerine-Sottas syndrome) have been identified. In SAMP6 we detected a p.S540fs frame-shift mutation in the Il4ra gene, a mutation potentially causative of ulcerative colitis and osteoporosis., Conclusions: Our data indicate that different combinations of mutations in disease-causing genes may be responsible for the various phenotypes of SAMP strains.
- Published
- 2013
- Full Text
- View/download PDF
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