128 results on '"Riley Richard"'
Search Results
2. Clinical prediction models and the multiverse of madness
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Riley, Richard D., Pate, Alexander, Dhiman, Paula, Archer, Lucinda, Martin, Glen P., and Collins, Gary S.
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- 2023
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3. Sample size requirements are not being considered in studies developing prediction models for binary outcomes: a systematic review
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Dhiman, Paula, Ma, Jie, Qi, Cathy, Bullock, Garrett, Sergeant, Jamie C, Riley, Richard D, and Collins, Gary S
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- 2023
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4. Methodological conduct of prognostic prediction models developed using machine learning in oncology: a systematic review
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Dhiman, Paula, Ma, Jie, Andaur Navarro, Constanza L., Speich, Benjamin, Bullock, Garrett, Damen, Johanna A. A., Hooft, Lotty, Kirtley, Shona, Riley, Richard D., Van Calster, Ben, Moons, Karel G. M., and Collins, Gary S.
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- 2022
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5. Bayesian network meta-analysis methods for combining individual participant data and aggregate data from single arm trials and randomised controlled trials
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Singh, Janharpreet, Gsteiger, Sandro, Wheaton, Lorna, Riley, Richard D., Abrams, Keith R., Gillies, Clare L., and Bujkiewicz, Sylwia
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- 2022
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6. Multivariate meta-analysis of multiple outcomes: characteristics and predictors of borrowing of strength from Cochrane reviews
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Hattle, Miriam, Burke, Danielle L., Trikalinos, Thomas, Schmid, Christopher H., Chen, Yong, Jackson, Dan, and Riley, Richard D.
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- 2022
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7. Risk of bias of prognostic models developed using machine learning: a systematic review in oncology
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Dhiman, Paula, Ma, Jie, Andaur Navarro, Constanza L., Speich, Benjamin, Bullock, Garrett, Damen, Johanna A. A., Hooft, Lotty, Kirtley, Shona, Riley, Richard D., Van Calster, Ben, Moons, Karel G. M., and Collins, Gary S.
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- 2022
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8. Targeted validation: validating clinical prediction models in their intended population and setting
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Sperrin, Matthew, Riley, Richard D., Collins, Gary S., and Martin, Glen P.
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- 2022
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9. Protocol for development and validation of postpartum cardiovascular disease (CVD) risk prediction model incorporating reproductive and pregnancy-related candidate predictors
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Wambua, Steven, Crowe, Francesca, Thangaratinam, Shakila, O’Reilly, Dermot, McCowan, Colin, Brophy, Sinead, Yau, Christopher, Nirantharakumar, Krishnarajah, and Riley, Richard
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- 2022
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10. Completeness of reporting of clinical prediction models developed using supervised machine learning: a systematic review
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Andaur Navarro, Constanza L., Damen, Johanna A. A., Takada, Toshihiko, Nijman, Steven W. J., Dhiman, Paula, Ma, Jie, Collins, Gary S., Bajpai, Ram, Riley, Richard D., Moons, Karel G. M., and Hooft, Lotty
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- 2022
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11. Continual updating and monitoring of clinical prediction models: time for dynamic prediction systems?
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Jenkins, David A., Martin, Glen P., Sperrin, Matthew, Riley, Richard D., Debray, Thomas P. A., Collins, Gary S., and Peek, Niels
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- 2021
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12. The development and validation of a prognostic model to PREDICT Relapse of depression in adult patients in primary care: protocol for the PREDICTR study
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Moriarty, Andrew S., Paton, Lewis W., Snell, Kym I. E., Riley, Richard D., Buckman, Joshua E. J., Gilbody, Simon, Chew-Graham, Carolyn A., Ali, Shehzad, Pilling, Stephen, Meader, Nick, Phillips, Bob, Coventry, Peter A., Delgadillo, Jaime, Richards, David A., Salisbury, Chris, and McMillan, Dean
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- 2021
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13. The statistical importance of a study for a network meta-analysis estimate
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Rücker, Gerta, Nikolakopoulou, Adriani, Papakonstantinou, Theodoros, Salanti, Georgia, Riley, Richard D., and Schwarzer, Guido
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- 2020
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14. A study protocol for the development and internal validation of a multivariable prognostic model to determine lower extremity muscle injury risk in elite football (soccer) players, with further exploration of prognostic factors
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Hughes, Tom, Riley, Richard, Sergeant, Jamie C., and Callaghan, Michael J.
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- 2019
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15. Predictors of the effects of treatment for shoulder pain: protocol of an individual participant data meta-analysis
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van der Windt, Danielle A., Burke, Danielle L., Babatunde, Opeyemi, Hattle, Miriam, McRobert, Cliona, Littlewood, Chris, Wynne-Jones, Gwenllian, Chesterton, Linda, van der Heijden, Geert J. M. G., Winters, Jan C., Rhon, Daniel I., Bennell, Kim, Roddy, Edward, Heneghan, Carl, Beard, David, Rees, Jonathan L., and Riley, Richard D.
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- 2019
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16. Evidence synthesis in prognosis research
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Debray, Thomas P.A., de Jong, Valentijn M.T., Moons, Karel G.M., and Riley, Richard D.
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- 2019
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17. First-trimester ultrasound measurements and maternal serum biomarkers as prognostic factors in monochorionic twins: a cohort study
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Mackie, Fiona L., Whittle, Rebecca, Morris, R. Katie, Hyett, Jon, Riley, Richard D., and Kilby, Mark D.
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- 2019
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18. Simulation-based power calculations for planning a two-stage individual participant data meta-analysis
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Ensor, Joie, Burke, Danielle L., Snell, Kym I. E., Hemming, Karla, and Riley, Richard D.
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- 2018
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19. Methodological conduct of prognostic prediction models developed using machine learning in oncology: a systematic review
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Epi Methoden Team 2, Epi Methoden Team 5, Epidemiology & Health Economics, JC onderzoeksprogramma Methodologie, Epi Methoden, Cancer, Dhiman, Paula, Ma, Jie, Andaur Navarro, Constanza L., Speich, Benjamin, Bullock, Garrett, Damen, Johanna A.A., Hooft, Lotty, Kirtley, Shona, Riley, Richard D., Van Calster, Ben, Moons, Karel G.M., Collins, Gary S., Epi Methoden Team 2, Epi Methoden Team 5, Epidemiology & Health Economics, JC onderzoeksprogramma Methodologie, Epi Methoden, Cancer, Dhiman, Paula, Ma, Jie, Andaur Navarro, Constanza L., Speich, Benjamin, Bullock, Garrett, Damen, Johanna A.A., Hooft, Lotty, Kirtley, Shona, Riley, Richard D., Van Calster, Ben, Moons, Karel G.M., and Collins, Gary S.
- Published
- 2022
20. Completeness of reporting of clinical prediction models developed using supervised machine learning: a systematic review
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Epi Methoden Team 2, Epi Methoden Team 5, HAG Trombose, Epi Methoden, Cancer, JC onderzoeksprogramma Methodologie, Andaur Navarro, Constanza L, Damen, Johanna A A, Takada, Toshihiko, Nijman, Steven W J, Dhiman, Paula, Ma, Jie, Collins, Gary S, Bajpai, Ram, Riley, Richard D, Moons, Karel G M, Hooft, Lotty, Epi Methoden Team 2, Epi Methoden Team 5, HAG Trombose, Epi Methoden, Cancer, JC onderzoeksprogramma Methodologie, Andaur Navarro, Constanza L, Damen, Johanna A A, Takada, Toshihiko, Nijman, Steven W J, Dhiman, Paula, Ma, Jie, Collins, Gary S, Bajpai, Ram, Riley, Richard D, Moons, Karel G M, and Hooft, Lotty
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- 2022
21. Reviewing the evidence supporting predictive biomarkers in European medicines agency indications and contraindications using visual plots
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Malottki, Kinga, Billingham, Lucinda, Riley, Richard, and Deeks, Jonathan
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- 2015
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22. Methods for Evaluating Medical Tests and Biomarkers
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Gopalakrishna, Gowri, Langendam, Miranda, Scholten, Rob, Bossuyt, Patrick, Leeflang, Mariska, Noel-Storr, Anna, Thomas, James, Marshall, Iain, Wallace, Byron, Whiting, Penny, Davenport, Clare, GopalaKrishna, Gowri, de Salis, Isabel, Mallett, Sue, Wolff, Robert, Riley, Richard, Westwood, Marie, Kleinen, Jos, Collins, Gary, Reitsma, Hans, Moons, Karel, Zapf, Antonia, Hoyer, Annika, Kramer, Katharina, Kuss, Oliver, Ensor, J., Deeks, J. J., Martin, E. C., Riley, R. D., Rücker, Gerta, Steinhauser, Susanne, Schumacher, Martin, Ensor, Joie, Snell, Kym, Willis, Brian, Debray, Thomas, Deeks, Jon, di Ruffano, Lavinia Ferrante, Taylor-Phillips, Sian, Hyde, Chris, Taylor, Stuart A., Batnagar, Gauraang, Di Ruffano, Lavinia Ferrante, Seedat, Farah, Clarke, Aileen, Byron, Sarah, Nixon, Frances, Albrow, Rebecca, Walker, Thomas, Deakin, Carla, Zhelev, Zhivko, Hunt, Harriet, Yang, Yaling, Abel, Lucy, Buchanan, James, Fanshawe, Thomas, Shinkins, Bethany, Wynants, Laure, Verbakel, Jan, Van Huffel, Sabine, Timmerman, Dirk, Van Calster, Ben, Zwinderman, Aeliko, Oke, Jason, O’Sullivan, Jack, Perera, Rafael, Nicholson, Brian, Bromley, Hannah L., Roberts, Tracy E., Francis, Adele, Petrie, Denniis, Mann, G. Bruce, Malottki, Kinga, Smith, Holly, Billingham, Lucinda, Sitch, Alice, Gerke, Oke, Holm-Vilstrup, Mie, Segtnan, Eivind Antonsen, Halekoh, Ulrich, Høilund-Carlsen, Poul Flemming, Francq, Bernard G., Dinnes, Jac, Parkes, Julie, Gregory, Walter, Hewison, Jenny, Altman, Doug, Rosenberg, William, Selby, Peter, Asselineau, Julien, Perez, Paul, Paye, Aïssatou, Bessede, Emilie, Proust-Lima, Cécile, Naaktgeboren, Christiana, de Groot, Joris, Rutjes, Anne, Reitsma, Johannes, Ogundimu, Emmanuel, Cook, Jonathan, Le Manach, Yannick, Vergouwe, Yvonne, Pajouheshnia, Romin, Groenwold, Rolf, Moons, Karen, Peelen, Linda, Nieboer, Daan, De Cock, Bavo, Pencina, Micael J., Steyerberg, Ewout W., Cooper, Jennifer, Parsons, Nick, Stinton, Chris, Smith, Steve, Dickens, Andy, Jordan, Rachel, Enocson, Alexandra, Fitzmaurice, David, Adab, Peymane, Boachie, Charles, Vidmar, Gaj, Freeman, Karoline, Connock, Martin, Court, Rachel, Moons, Carl, Harris, Jessica, Mumford, Andrew, Plummer, Zoe, Lee, Kurtis, Reeves, Barnaby, Rogers, Chris, Verheyden, Veerle, Angelini, Gianni D., Murphy, Gavin J., Huddy, Jeremy, Ni, Melody, Good, Katherine, Cooke, Graham, Hanna, George, Ma, Jie, Moons, K. G. M. (Carl), de Groot, Joris A. H., Altman, Doug G., Reitsma, Johannes B., Collins, Gary S., Moons, Karel G. M., Altman, Douglas G., Kamarudin, Adina Najwa, Kolamunnage-Dona, Ruwanthi, Cox, Trevor, Borsci, Simone, Pérez, Teresa, Pardo, M.Carmen, Candela-Toha, Angel, Muriel, Alfonso, Zamora, Javier, Sanghera, Sabina, Mohiuddin, Syed, Martin, Richard, Donovan, Jenny, Coast, Joanna, Seo, Mikyung Kelly, Cairns, John, Mitchell, Elizabeth, Smith, Alison, Wright, Judy, Hall, Peter, Messenger, Michael, Calder, Nicola, Wickramasekera, Nyantara, Vinall-Collier, Karen, Lewington, Andrew, Damen, Johanna, Cairns, David, Hutchinson, Michelle, Sturgeon, Cathie, Mitchel, Liz, Kift, Rebecca, Christakoudi, Sofia, Rungall, Manohursingh, Mobillo, Paula, Montero, Rosa, Tsui, Tjir-Li, Kon, Sui Phin, Tucker, Beatriz, Sacks, Steven, Farmer, Chris, Strom, Terry, Chowdhury, Paramit, Rebollo-Mesa, Irene, Hernandez-Fuentes, Maria, Damen, Johanna A. A. G., Debray, Thomas P. A., Heus, Pauline, Hooft, Lotty, Scholten, Rob J. P. M., Schuit, Ewoud, Tzoulaki, Ioanna, Lassale, Camille M., Siontis, George C. M., Chiocchia, Virginia, Roberts, Corran, Schlüssel, Michael Maia, Gerry, Stephen, Black, James A., van der Schouw, Yvonne T., Peelen, Linda M., Spence, Graeme, McCartney, David, van den Bruel, Ann, Lasserson, Daniel, Hayward, Gail, Vach, Werner, de Jong, Antoinette, Burggraaff, Coreline, Hoekstra, Otto, Zijlstra, Josée, de Vet, Henrica, Graziadio, Sara, Allen, Joy, Johnston, Louise, O’Leary, Rachel, Power, Michael, Johnson, Louise, Waters, Ray, Simpson, John, Fanshawe, Thomas R., Phillips, Peter, Plumb, Andrew, Helbren, Emma, Halligan, Steve, Gale, Alastair, Sekula, Peggy, Sauerbrei, Willi, Forman, Julia R., Dutton, Susan J., Takwoingi, Yemisi, Hensor, Elizabeth M., Nichols, Thomas E., Kempf, Emmanuelle, Porcher, Raphael, de Beyer, Jennifer, Altman, Douglas, Hopewell, Sally, Dennis, John, Shields, Beverley, Jones, Angus, Henley, William, Pearson, Ewan, Hattersley, Andrew, Scheibler, Fueloep, Rummer, Anne, Sturtz, Sibylle, Großelfinger, Robert, Banister, Katie, Ramsay, Craig, Azuara-Blanco, Augusto, Burr, Jennifer, Kumarasamy, Manjula, Bourne, Rupert, Uchegbu, Ijeoma, Murphy, Jennifer, Carter, Alex, Murphy, Jen, Marti, Joachim, Eatock, Julie, Robotham, Julie, Dudareva, Maria, Gilchrist, Mark, Holmes, Alison, Monaghan, Phillip, Lord, Sarah, StJohn, Andrew, Sandberg, Sverre, Cobbaert, Christa, Lennartz, Lieselotte, Verhagen-Kamerbeek, Wilma, Ebert, Christoph, Horvath, Andrea, Jenniskens, Kevin, Peters, Jaime, Grigore, Bogdan, Ukoumunne, Obi, Levis, Brooke, Benedetti, Andrea, Levis, Alexander W., Ioannidis, John P. A., Shrier, Ian, Cuijpers, Pim, Gilbody, Simon, Kloda, Lorie A., McMillan, Dean, Patten, Scott B, Steele, Russell J., Ziegelstein, Roy C, Bombardier, Charles H., Osório, Flavia de Lima, Fann, Jesse R., Gjerdingen, Dwenda, Lamers, Femke, Lotrakul, Manote, Loureiro, Sonia R, Löwe, Bernd, Shaaban, Juwita, Stafford, Lesley, van Weert, Henk C. P. M., Whooley, Mary A., Williams, Linda S., Wittkampf, Karin A., Yeung, Albert S., Thombs, Brett D., Cooper, Chris, Nieto, Tom, Smith, Claire, Tucker, Olga, Dretzke, Janine, Beggs, Andrew, Rai, Nirmala, Bayliss, Sue, Stevens, Simon, Mallet, Sue, Sundar, Sudha, Hall, Emma, Porta, Nuria, Estelles, David Lorente, and de Bono, Johann
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Faecal Immunochemical Test ,Chronic Obstructive Pulmonary Disorder ,Circulate Tumour Cell Count ,Apply Health Research ,Meeting Abstracts ,Faecal Immunochemical Test Result - Abstract
unKnown
- Published
- 2017
23. Prediction of complications in early-onset pre-eclampsia (PREP) : Development and external multinational validation of prognostic models
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Thangaratinam, Shakila, Allotey, John, Marlin, Nadine, Dodds, Julie, Cheong-See, Fiona, von Dadelszen, Peter, Ganzevoort, Wessel, Akkermans, Joost, Kerry, Sally, Mol, Ben W., Moons, Karl G.M., Riley, Richard D., Khan, Khalid S., Thangaratinam, Shakila, Allotey, John, Marlin, Nadine, Dodds, Julie, Cheong-See, Fiona, von Dadelszen, Peter, Ganzevoort, Wessel, Akkermans, Joost, Kerry, Sally, Mol, Ben W., Moons, Karl G.M., Riley, Richard D., and Khan, Khalid S.
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- 2017
24. Prediction of complications in early-onset pre-eclampsia (PREP): Development and external multinational validation of prognostic models
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Epi Methoden, Circulatory Health, Cancer, Child Health, JC onderzoeksprogramma Methodologie, Thangaratinam, Shakila, Allotey, John, Marlin, Nadine, Dodds, Julie, Cheong-See, Fiona, von Dadelszen, Peter, Ganzevoort, Wessel, Akkermans, Joost, Kerry, Sally, Mol, Ben W., Moons, Karl G.M., Riley, Richard D., Khan, Khalid S., Epi Methoden, Circulatory Health, Cancer, Child Health, JC onderzoeksprogramma Methodologie, Thangaratinam, Shakila, Allotey, John, Marlin, Nadine, Dodds, Julie, Cheong-See, Fiona, von Dadelszen, Peter, Ganzevoort, Wessel, Akkermans, Joost, Kerry, Sally, Mol, Ben W., Moons, Karl G.M., Riley, Richard D., and Khan, Khalid S.
- Published
- 2017
25. Meta-analysis of test accuracy studies: an exploratory method for investigating the impact of missing thresholds
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Riley, Richard D, Ahmed, Ikhlaaq, Ensor, Joie, Takwoingi, Yemisi, Kirkham, Amanda, Morris, R Katie, Noordzij, J Pieter, and Deeks, Jonathan J
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Models, Statistical ,Clinical Laboratory Techniques ,Missing data ,Methodology ,R735 ,Reproducibility of Results ,Diagnostic test ,Multiple thresholds ,Sensitivity and Specificity ,Meta-analysis ,Bias ,Data Interpretation, Statistical ,Humans ,Sensitivity analysis ,Imputation - Abstract
Background Primary studies examining the accuracy of a continuous test evaluate its sensitivity and specificity at one or more thresholds. Meta-analysts then usually perform a separate meta-analysis for each threshold. However, the number of studies available for each threshold is often very different, as primary studies are inconsistent in the thresholds reported. Furthermore, of concern is selective reporting bias, because primary studies may be less likely to report a threshold when it gives low sensitivity and/or specificity estimates. This may lead to biased meta-analysis results. We developed an exploratory method to examine the potential impact of missing thresholds on conclusions from a test accuracy meta-analysis. Methods Our method identifies studies that contain missing thresholds bounded between a pair of higher and lower thresholds for which results are available. The bounded missing threshold results (two-by-two tables) are then imputed, by assuming a linear relationship between threshold value and each of logit-sensitivity and logit-specificity. The imputed results are then added to the meta-analysis, to ascertain if original conclusions are robust. The method is evaluated through simulation, and application made to 13 studies evaluating protein:creatinine ratio (PCR) for detecting proteinuria in pregnancy with 23 different thresholds, ranging from one to seven per study. Results The simulation shows the imputation method leads to meta-analysis estimates with smaller mean-square error. In the PCR application, it provides 50 additional results for meta-analysis and their inclusion produces lower test accuracy results than originally identified. For example, at a PCR threshold of 0.16, the summary specificity is 0.80 when using the original data, but 0.66 when also including the imputed data. At a PCR threshold of 0.25, the summary sensitivity is reduced from 0.95 to 0.85 when additionally including the imputed data. Conclusions The imputation method is a practical tool for researchers (often non-statisticians) to explore the potential impact of missing threshold results on their meta-analysis conclusions. Software is available to implement the method. In the PCR example, it revealed threshold results are vulnerable to the missing data, and so stimulates the need for advanced statistical models or, preferably, individual patient data from primary studies. Electronic supplementary material The online version of this article (doi:10.1186/2046-4053-4-12) contains supplementary material, which is available to authorized users.
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- 2015
26. The science of clinical practice: disease diagnosis or patient prognosis? Evidence about 'what is likely to happen' should shape clinical practice
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Croft, Peter, Altman, Douglas G, Deeks, Jonathan J, Dunn, Kate M, Hay, Alastair D, Hemingway, Harry, LeResche, Linda, Peat, George, Perel, Pablo, Petersen, Steffen E, Riley, Richard D, Roberts, Ian, Sharpe, Michael, Stevens, Richard J, Van Der Windt, Danielle A, Von Korff, Michael, and Timmis, Adam
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Medicine(all) ,Opinion ,Evidence-based medicine ,Overdiagnosis ,Decision Making ,Outcomes of care ,Professional Practice ,Stratified medicine ,Prognosis ,Contested diagnoses ,R1 ,Information ,Diagnosis ,Humans ,Diagnostic Errors ,Clinical decision-making - Abstract
BACKGROUND: Diagnosis is the traditional basis for decision-making in clinical practice. Evidence is often lacking about future benefits and harms of these decisions for patients diagnosed with and without disease. We propose that a model of clinical practice focused on patient prognosis and predicting the likelihood of future outcomes may be more useful. DISCUSSION: Disease diagnosis can provide crucial information for clinical decisions that influence outcome in serious acute illness. However, the central role of diagnosis in clinical practice is challenged by evidence that it does not always benefit patients and that factors other than disease are important in determining patient outcome. The concept of disease as a dichotomous 'yes' or 'no' is challenged by the frequent use of diagnostic indicators with continuous distributions, such as blood sugar, which are better understood as contributing information about the probability of a patient's future outcome. Moreover, many illnesses, such as chronic fatigue, cannot usefully be labelled from a disease-diagnosis perspective. In such cases, a prognostic model provides an alternative framework for clinical practice that extends beyond disease and diagnosis and incorporates a wide range of information to predict future patient outcomes and to guide decisions to improve them. Such information embraces non-disease factors and genetic and other biomarkers which influence outcome. SUMMARY: Patient prognosis can provide the framework for modern clinical practice to integrate information from the expanding biological, social, and clinical database for more effective and efficient care.
- Published
- 2015
27. A random effects meta-analysis model with Box-Cox transformation.
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Yusuke Yamaguchi, Kazushi Maruo, Partlett, Christopher, Riley, Richard D., Yamaguchi, Yusuke, and Maruo, Kazushi
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META-synthesis ,TREATMENT effectiveness ,DRUG efficacy ,PSYCHOMETRICS ,RANDOM effects model ,ALGORITHMS ,COMPUTER simulation ,META-analysis ,MULTIVARIATE analysis ,PROBABILITY theory ,STATISTICS ,STATISTICAL models - Abstract
Background: In a random effects meta-analysis model, true treatment effects for each study are routinely assumed to follow a normal distribution. However, normality is a restrictive assumption and the misspecification of the random effects distribution may result in a misleading estimate of overall mean for the treatment effect, an inappropriate quantification of heterogeneity across studies and a wrongly symmetric prediction interval.Methods: We focus on problems caused by an inappropriate normality assumption of the random effects distribution, and propose a novel random effects meta-analysis model where a Box-Cox transformation is applied to the observed treatment effect estimates. The proposed model aims to normalise an overall distribution of observed treatment effect estimates, which is sum of the within-study sampling distributions and the random effects distribution. When sampling distributions are approximately normal, non-normality in the overall distribution will be mainly due to the random effects distribution, especially when the between-study variation is large relative to the within-study variation. The Box-Cox transformation addresses this flexibly according to the observed departure from normality. We use a Bayesian approach for estimating parameters in the proposed model, and suggest summarising the meta-analysis results by an overall median, an interquartile range and a prediction interval. The model can be applied for any kind of variables once the treatment effect estimate is defined from the variable.Results: A simulation study suggested that when the overall distribution of treatment effect estimates are skewed, the overall mean and conventional I 2 from the normal random effects model could be inappropriate summaries, and the proposed model helped reduce this issue. We illustrated the proposed model using two examples, which revealed some important differences on summary results, heterogeneity measures and prediction intervals from the normal random effects model.Conclusions: The random effects meta-analysis with the Box-Cox transformation may be an important tool for examining robustness of traditional meta-analysis results against skewness on the observed treatment effect estimates. Further critical evaluation of the method is needed. [ABSTRACT FROM AUTHOR]- Published
- 2017
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28. TargetCOPD: a pragmatic randomised controlled trial of targeted case finding for COPD versus routine practice in primary care: protocol.
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Jordan, Rachel E., Adab, Peymané, Jowett, Sue, Marsh, Jen L., Riley, Richard D., Enocson, Alexandra, Miller, Martin R., Cooper, Brendan G., Turner, Alice M., Ayres, Jon G., Kar Keung Cheng, Jolly, Kate, Stockley, Robert A., Greenfield, Sheila, Siebert, Stanley, Daley, Amanda, and Fitzmaurice, David A.
- Abstract
Background: Many people with clinically significant chronic obstructive pulmonary disease (COPD) remain undiagnosed worldwide. There are a number of small studies which have examined possible methods of case finding through primary care, but no large RCTs that have adequately assessed the most cost-effective approach. Methods/Design: In this study, using a cluster randomised controlled trial (RCT) in 56 general practices in the West Midlands, we plan to investigate the effectiveness and cost-effectiveness of a Targeted approach to case finding for COPD compared with routine practice. Using an individual patient RCT nested in the Targeted arm, we plan also to compare the effectiveness and cost-effectiveness of Active case finding using a postal questionnaire (with supplementary opportunistic questionnaires), and Opportunistic-only case finding during routine surgery consultations. All ever-smoking patients aged 40-79 years, without a current diagnosis of COPD and registered with participating practices will be eligible. Patients in the Targeted arm who report positive respiratory symptoms (chronic cough or phlegm, wheeze or dyspnoea) using a brief questionnaire will be invited for further spirometric assessment to ascertain whether they have COPD or not. Post-bronchodilator spirometry will be conducted to ATS standards using an Easy One spirometer by trained research assistants. The primary outcomes will be new cases of COPD and cost per new case identified, comparing targeted case finding with routine care, and two types of targeted case finding (active versus opportunistic). A multilevel logistic regression model will be used to model the probability of detecting a new case of COPD for each treatment arm, with clustering of patients (by practice and household) accounted for using a multi-level structure. A trial-based analysis will be undertaken using costs and outcomes collected during the trial. Secondary outcomes include the feasibility, efficiency, long-term cost-effectiveness, patient and primary care staff views of each approach. Discussion: This will be the largest RCT of its kind, and should inform how best to identify undiagnosed patients with COPD in the UK and other similar healthcare systems. Sensitivity analyses will help local policy-makers decide which sub-groups of the population to target first. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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29. Developing and validating risk prediction models in an individual participant data meta-analysis.
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Ahmed, Ikhlaaq, Debray, Thomas P. A., Moons, Karel G. M., and Riley, Richard D.
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META-analysis ,PROGNOSTIC tests ,PROGNOSIS ,PATIENT participation ,MEDICAL research - Abstract
Background Risk prediction models estimate the risk of developing future outcomes for individuals based on one or more underlying characteristics (predictors). We review how researchers develop and validate risk prediction models within an individual participant data (IPD) meta-analysis, in order to assess the feasibility and conduct of the approach. Methods A qualitative review of the aims, methodology, and reporting in 15 articles that developed a risk prediction model using IPD from multiple studies. Results The IPD approach offers many opportunities but methodological challenges exist, including: unavailability of requested IPD, missing patient data and predictors, and between-study heterogeneity in methods of measurement, outcome definitions and predictor effects. Most articles develop their model using IPD from all available studies and perform only an internal validation (on the same set of data). Ten of the 15 articles did not allow for any study differences in baseline risk (intercepts), potentially limiting their model's applicability and performance in some populations. Only two articles used external validation (on different data), including a novel method which develops the model on all but one of the IPD studies, tests performance in the excluded study, and repeats by rotating the omitted study. Conclusions An IPD meta-analysis offers unique opportunities for risk prediction research. Researchers can make more of this by allowing separate model intercept terms for each study (population) to improve generalisability, and by using 'internal-external cross-validation' to simultaneously develop and validate their model. Methodological challenges can be reduced by prospectively planned collaborations that share IPD for risk prediction. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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30. Individual participant data meta-analysis of prognostic factor studies: state of the art?
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Abo-Zaid, Ghada, Sauerbrei, Willi, and Riley, Richard D.
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META-analysis ,PROGNOSIS ,MEDICAL records ,MEDICAL statistics - Published
- 2012
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31. Conducting a critical interpretive synthesis of the literature on access to healthcare by vulnerable groups.
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Dixon-Woods, Mary, Cavers, Debbie, Agarwal, Shona, Annandale, Ellen, Arthur, Antony, Harvey, Janet, Hsu, Ron, Katbamna, Savita, Olsen, Richard, Smith, Lucy, Riley, Richard, and Sutton, Alex J.
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MEDICAL care ,MEDICINE ,METHODOLOGY ,RESEARCH - Abstract
Background: Conventional systematic review techniques have limitations when the aim of a review is to construct a critical analysis of a complex body of literature. This article offers a reflexive account of an attempt to conduct an interpretive review of the literature on access to healthcare by vulnerable groups in the UK Methods: This project involved the development and use of the method of Critical Interpretive Synthesis (CIS). This approach is sensitised to the processes of conventional systematic review methodology and draws on recent advances in methods for interpretive synthesis. Results: Many analyses of equity of access have rested on measures of utilisation of health services, but these are problematic both methodologically and conceptually. A more useful means of understanding access is offered by the synthetic construct of candidacy. Candidacy describes how people's eligibility for healthcare is determined between themselves and health services. It is a continually negotiated property of individuals, subject to multiple influences arising both from people and their social contexts and from macro-level influences on allocation of resources and configuration of services. Health services are continually constituting and seeking to define the appropriate objects of medical attention and intervention, while at the same time people are engaged in constituting and defining what they understand to be the appropriate objects of medical attention and intervention. Access represents a dynamic interplay between these simultaneous, iterative and mutually reinforcing processes. By attending to how vulnerabilities arise in relation to candidacy, the phenomenon of access can be better understood, and more appropriate recommendations made for policy, practice and future research. Discussion: By innovating with existing methods for interpretive synthesis, it was possible to produce not only new methods for conducting what we have termed critical interpretive synthesis, but also a new theoretical conceptualisation of access to healthcare. This theoretical account of access is distinct from models already extant in the literature, and is the result of combining diverse constructs and evidence into a coherent whole. Both the method and the model should be evaluated in other contexts. [ABSTRACT FROM AUTHOR]
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- 2006
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32. Erratum to: Study protocol: differential effects of diet and physical activity based interventions in pregnancy on maternal and fetal outcomes: individual patient data (IPD) meta-analysis and health economic evaluation
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Vitolo, Marcia, Scudeller, Tânia T, de Groot, Christianne J M, Stafne, Signe N, Roberts, Tracy, Salvesen, Kjell Å, Owens, Julie, Vistad, Ingvild, Ruifrok, Anneloes E, Cecatti, Jose G, Rogozinska, Ewelina, Khan, Khalid S, Kinnunen, Tarja I, Rauh, Kathrin, Astrup, Arne, Riley, Richard D, Rayanagoudar, Girish, Vinter, Christina, Shub, Alexis, Yeo, SeonAe, Facchinetti, Fabio, Mørkved, Siv, Molyneaux, Emma, Motahari, Narges, Thangaratinam, Shakila, Kerry, Sally, Haakstad, Lene, Khoury, Janette, Shen, Garry X, Surita, Fernanda, Hauner, Hans, Devlieger, Roland, El Beltagy, Nermeen, Geiker, Nina R W, van Poppel, Mireille N M, Bogaerts, Annick, Mol, Ben W, Luoto, Riitta, Petrella, Elisabetta, McAuliffe, Fionnuala, Tonstad, Serena, Poston, Lucilla, Sagedal, Linda R, Barakat Carballo, Ruben, Phelan, Suzanne, Renault, Kristina, Coomarasamy, Arri, Dodd, Jodie, Guelfi, Kym, Perales, Maria, Harrison, Cheryce, and Teede, Helena
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3. Good health - Abstract
After publication of this work [1], we noted that we inadvertently failed to include the complete list of all coauthors and that sample sizes of some of the trials listed in Table two were incorrect.
33. Meta-analysis of randomized phase II trials to inform subsequent phase III decisions.
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Burke, Danielle L, Billingham, Lucinda J, Girling, Alan J, and Riley, Richard D
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PUBLICATION bias ,RESEARCH ,CLINICAL trials ,SAMPLE size (Statistics) ,META-analysis ,RESEARCH methodology ,THROMBOLYTIC therapy ,MYOCARDIAL infarction ,MEDICAL cooperation ,EVALUATION research ,COMPARATIVE studies ,PROBABILITY theory - Abstract
Background: If multiple Phase II randomized trials exist then meta-analysis is favorable to increase statistical power and summarize the existing evidence about an intervention's effect in order to help inform Phase III decisions. We consider some statistical issues for meta-analysis of Phase II trials for this purpose, as motivated by a real example involving nine Phase II trials of bolus thrombolytic therapy in acute myocardial infarction with binary outcomes.Methods: We propose that a Bayesian random effects logistic regression model is most suitable as it models the binomial distribution of the data, helps avoid continuity corrections, accounts for between-trial heterogeneity, and incorporates parameter uncertainty when making inferences. The model also allows predictions that inform Phase III decisions, and we show how to derive: (i) the probability that the intervention will be truly beneficial in a new trial, and (ii) the probability that, in a new trial with a given sample size, the 95% credible interval for the odds ratio will be entirely in favor of the intervention. As Phase II trials are potentially optimistic due to bias in design and reporting, we also discuss how skeptical prior distributions can reduce this optimism to make more realistic predictions.Results: In the example, the model identifies heterogeneity in intervention effect missed by an I-squared of 0%. Prediction intervals accounting for this heterogeneity are shown to support subsequent Phase III trials. The probability of success in Phase III trials increases as the sample size increases, up to 0.82 for intracranial hemorrhage and 0.79 for reinfarction outcomes.Conclusions: The choice of meta-analysis methods can influence the decision about whether a trial should proceed to Phase III and thus need to be clearly documented and investigated whenever a Phase II meta-analysis is performed. [ABSTRACT FROM AUTHOR]- Published
- 2014
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34. Individual participant data meta-analyses compared with meta-analyses based on aggregate data.
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Smith, Catrin Tudur, Oyee, James, Marcucci, Maura, Rovers, Maroeska, Iorio, Alfonso, Riley, Richard, Williamson, Paula, and Clarke, Mike
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RANDOMIZED controlled trials ,META-analysis - Abstract
An abstract of the article "Individual participant data meta-analyses compared with meta-analyses based on aggregate data," by Catrin Tudur Smith and colleagues, is presented.
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- 2011
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35. Feasibility of establishing a central repository for the individual participant data from research studies.
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Smith, Catrin Tudur, Dwan, Kerry, Clarke, Mike, Riley, Richard, Altman, Douglas, and Williamson, Paula
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RANDOMIZED controlled trials ,MEDICAL research - Abstract
An abstract of the article "Feasibility of establishing a central repository for the individual participant data from research studies," by Catrin Tudur Smith and colleagues, is presented.
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- 2011
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36. Stratified medicine in practice: review of predictive biomarkers in European Medicines Agency (EMA) indications.
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Malottki, Kinga, Biswas, Mousumi, Deeks, Jon, Riley, Richard, Craddock, Charles, and Billingham, Lucinda
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CLINICAL medicine ,BIOMARKERS - Abstract
An abstract of the article "Stratified medicine in practice: review of predictive biomarkers in European Medicines Agency (EMA) indications," by Kinga Malottki and colleagues, is presented.
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- 2011
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37. External validation of prognostic models predicting pre-eclampsia: individual participant data meta-analysis.
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Snell KIE, Allotey J, Smuk M, Hooper R, Chan C, Ahmed A, Chappell LC, Von Dadelszen P, Green M, Kenny L, Khalil A, Khan KS, Mol BW, Myers J, Poston L, Thilaganathan B, Staff AC, Smith GCS, Ganzevoort W, Laivuori H, Odibo AO, Arenas Ramírez J, Kingdom J, Daskalakis G, Farrar D, Baschat AA, Seed PT, Prefumo F, da Silva Costa F, Groen H, Audibert F, Masse J, Skråstad RB, Salvesen KÅ, Haavaldsen C, Nagata C, Rumbold AR, Heinonen S, Askie LM, Smits LJM, Vinter CA, Magnus P, Eero K, Villa PM, Jenum AK, Andersen LB, Norman JE, Ohkuchi A, Eskild A, Bhattacharya S, McAuliffe FM, Galindo A, Herraiz I, Carbillon L, Klipstein-Grobusch K, Yeo SA, Browne JL, Moons KGM, Riley RD, and Thangaratinam S
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- Female, Humans, Pregnancy, Prognosis, Reproducibility of Results, Research Design, Risk Assessment, Pre-Eclampsia diagnosis, Pregnancy Complications diagnosis
- Abstract
Background: Pre-eclampsia is a leading cause of maternal and perinatal mortality and morbidity. Early identification of women at risk during pregnancy is required to plan management. Although there are many published prediction models for pre-eclampsia, few have been validated in external data. Our objective was to externally validate published prediction models for pre-eclampsia using individual participant data (IPD) from UK studies, to evaluate whether any of the models can accurately predict the condition when used within the UK healthcare setting., Methods: IPD from 11 UK cohort studies (217,415 pregnant women) within the International Prediction of Pregnancy Complications (IPPIC) pre-eclampsia network contributed to external validation of published prediction models, identified by systematic review. Cohorts that measured all predictor variables in at least one of the identified models and reported pre-eclampsia as an outcome were included for validation. We reported the model predictive performance as discrimination (C-statistic), calibration (calibration plots, calibration slope, calibration-in-the-large), and net benefit. Performance measures were estimated separately in each available study and then, where possible, combined across studies in a random-effects meta-analysis., Results: Of 131 published models, 67 provided the full model equation and 24 could be validated in 11 UK cohorts. Most of the models showed modest discrimination with summary C-statistics between 0.6 and 0.7. The calibration of the predicted compared to observed risk was generally poor for most models with observed calibration slopes less than 1, indicating that predictions were generally too extreme, although confidence intervals were wide. There was large between-study heterogeneity in each model's calibration-in-the-large, suggesting poor calibration of the predicted overall risk across populations. In a subset of models, the net benefit of using the models to inform clinical decisions appeared small and limited to probability thresholds between 5 and 7%., Conclusions: The evaluated models had modest predictive performance, with key limitations such as poor calibration (likely due to overfitting in the original development datasets), substantial heterogeneity, and small net benefit across settings. The evidence to support the use of these prediction models for pre-eclampsia in clinical decision-making is limited. Any models that we could not validate should be examined in terms of their predictive performance, net benefit, and heterogeneity across multiple UK settings before consideration for use in practice., Trial Registration: PROSPERO ID: CRD42015029349 .
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- 2020
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38. External validation, update and development of prediction models for pre-eclampsia using an Individual Participant Data (IPD) meta-analysis: the International Prediction of Pregnancy Complication Network (IPPIC pre-eclampsia) protocol.
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Allotey J, Snell KIE, Chan C, Hooper R, Dodds J, Rogozinska E, Khan KS, Poston L, Kenny L, Myers J, Thilaganathan B, Chappell L, Mol BW, Von Dadelszen P, Ahmed A, Green M, Poon L, Khalil A, Moons KGM, Riley RD, and Thangaratinam S
- Abstract
Background: Pre-eclampsia, a condition with raised blood pressure and proteinuria is associated with an increased risk of maternal and offspring mortality and morbidity. Early identification of mothers at risk is needed to target management., Methods/design: We aim to systematically review the existing literature to identify prediction models for pre-eclampsia. We have established the International Prediction of Pregnancy Complication Network (IPPIC), made up of 72 researchers from 21 countries who have carried out relevant primary studies or have access to existing registry databases, and collectively possess data from more than two million patients. We will use the individual participant data (IPD) from these studies to externally validate these existing prediction models and summarise model performance across studies using random-effects meta-analysis for any, late (after 34 weeks) and early (before 34 weeks) onset pre-eclampsia. If none of the models perform well, we will recalibrate (update), or develop and validate new prediction models using the IPD. We will assess the differential accuracy of the models in various settings and subgroups according to the risk status. We will also validate or develop prediction models based on clinical characteristics only; clinical and biochemical markers; clinical and ultrasound parameters; and clinical, biochemical and ultrasound tests., Discussion: Numerous systematic reviews with aggregate data meta-analysis have evaluated various risk factors separately or in combination for predicting pre-eclampsia, but these are affected by many limitations. Our large-scale collaborative IPD approach encourages consensus towards well developed, and validated prognostic models, rather than a number of competing non-validated ones. The large sample size from our IPD will also allow development and validation of multivariable prediction model for the relatively rare outcome of early onset pre-eclampsia., Trial Registration: The project was registered on Prospero on the 27 November 2015 with ID: CRD42015029349., Competing Interests: Not applicableNot applicableKM is Editor-in-Chief and KS is an associate editor for BMC Diagnostic and Prognostic Research. The other authors declare that they have no competing interests.Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
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- 2017
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39. Erratum to: Methods for evaluating medical tests and biomarkers.
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Gopalakrishna G, Langendam M, Scholten R, Bossuyt P, Leeflang M, Noel-Storr A, Thomas J, Marshall I, Wallace B, Whiting P, Davenport C, Leeflang M, GopalaKrishna G, de Salis I, Mallett S, Wolff R, Whiting P, Riley R, Westwood M, Kleinen J, Collins G, Reitsma H, Moons K, Zapf A, Hoyer A, Kramer K, Kuss O, Ensor J, Deeks JJ, Martin EC, Riley RD, Rücker G, Steinhauser S, Schumacher M, Riley R, Ensor J, Snell K, Willis B, Debray T, Moons K, Deeks J, Collins G, di Ruffano LF, Willis B, Davenport C, Mallett S, Taylor-Phillips S, Hyde C, Deeks J, Mallett S, Taylor SA, Batnagar G, Taylor-Phillips S, Di Ruffano LF, Seedat F, Clarke A, Deeks J, Byron S, Nixon F, Albrow R, Walker T, Deakin C, Hyde C, Zhelev Z, Hunt H, di Ruffano LF, Yang Y, Abel L, Buchanan J, Fanshawe T, Shinkins B, Wynants L, Verbakel J, Van Huffel S, Timmerman D, Van Calster B, Leeflang M, Zwinderman A, Bossuyt P, Oke J, O'Sullivan J, Perera R, Nicholson B, Bromley HL, Roberts TE, Francis A, Petrie D, Mann GB, Malottki K, Smith H, Deeks J, Billingham L, Sitch A, Mallett S, Deeks J, Gerke O, Holm-Vilstrup M, Segtnan EA, Halekoh U, Høilund-Carlsen PF, Francq BG, Deeks J, Sitch A, Dinnes J, Parkes J, Gregory W, Hewison J, Altman D, Rosenberg W, Selby P, Asselineau J, Perez P, Paye A, Bessede E, Proust-Lima C, Naaktgeboren C, de Groot J, Rutjes A, Bossuyt P, Reitsma J, Moons K, Collins G, Ogundimu E, Cook J, Le Manach Y, Altman D, Wynants L, Vergouwe Y, Van Huffel S, Timmerman D, Van Calster B, Pajouheshnia R, Groenwold R, Moons K, Reitsma J, Peelen L, Van Calster B, Nieboer D, Vergouwe Y, De Cock B, Pencina MJ, Steyerberg EW, Cooper J, Taylor-Phillips S, Parsons N, Stinton C, Smith S, Dickens A, Jordan R, Enocson A, Fitzmaurice D, Sitch A, Adab P, Francq BG, Boachie C, Vidmar G, Freeman K, Connock M, Taylor-Phillips S, Court R, Clarke A, de Groot J, Naaktgeboren C, Reitsma H, Moons C, Harris J, Mumford A, Plummer Z, Lee K, Reeves B, Rogers C, Verheyden V, Angelini GD, Murphy GJ, Huddy J, Ni M, Good K, Cooke G, Bossuyt P, Hanna G, Ma J, Altman D, Collins G, Moons KGMC, de Groot JAH, Mallett S, Altman DG, Reitsma JB, Collins GS, Moons KGM, Altman DG, Reitsma JB, Collins GS, Kamarudin AN, Kolamunnage-Dona R, Cox T, Ni M, Huddy J, Borsci S, Hanna G, Pérez T, Pardo MC, Candela-Toha A, Muriel A, Zamora J, Sanghera S, Mohiuddin S, Martin R, Donovan J, Coast J, Seo MK, Cairns J, Mitchell E, Smith A, Wright J, Hall P, Messenger M, Calder N, Wickramasekera N, Vinall-Collier K, Lewington A, Pajouheshnia R, Damen J, Groenwold R, Moons K, Peelen L, Messenger M, Cairns D, Smith A, Hutchinson M, Wright J, Hall P, Calder N, Sturgeon C, Mitchel L, Kift R, Christakoudi S, Rungall M, Mobillo P, Montero R, Tsui TL, Kon SP, Tucker B, Sacks S, Farmer C, Strom T, Chowdhury P, Rebollo-Mesa I, Hernandez-Fuentes M, Damen JAAG, Debray TPA, Heus P, Hooft L, Moons KGM, Pajouheshnia R, Reitsma JB, Scholten RJPM, Damen JAAG, Hooft L, Schuit E, Debray TPA, Collins GS, Tzoulaki I, Lassale CM, Siontis GCM, Chiocchia V, Roberts C, Schlüssel MM, Gerry S, Black JA, Heus P, van der Schouw YT, Peelen LM, Moons KGM, Damen JAAG, Debray TPA, Heus P, Hooft L, Moons KGM, Pajouheshnia R, Reitsma JB, Scholten RJPM, Ma J, Altman D, Collins G, Spence G, McCartney D, van den Bruel A, Lasserson D, Hayward G, Vach W, de Jong A, Burggraaff C, Hoekstra O, Zijlstra J, de Vet H, Hunt H, Hyde C, Graziadio S, Allen J, Johnston L, O'Leary R, Power M, Allen J, Graziadio S, Johnson L, O'Leary R, Power M, Waters R, Simpson J, Johnston L, Allen J, Graziadio S, O'Leary R, Waters R, Power M, Mallett S, Fanshawe TR, Phillips P, Plumb A, Helbren E, Halligan S, Taylor SA, Gale A, Mallett S, Sekula P, Altman DG, Sauerbrei W, Mallett S, Fanshawe TR, Forman JR, Dutton SJ, Takwoingi Y, Hensor EM, Nichols TE, Shinkins B, Yang Y, Abel L, Di Ruffano LF, Fanshawe T, Kempf E, Porcher R, de Beyer J, Moons K, Altman D, Reitsma H, Hopewell S, Sauerbrei W, Collins G, Dennis J, Shields B, Jones A, Henley W, Pearson E, Hattersley A, Heus P, Damen JAAG, Pajouheshnia R, Scholten RJPM, Reitsma JB, Collins GS, Altman DG, Moons KGM, Hooft L, Shields B, Dennis J, Jones A, Henley W, Pearson E, Hattersley A, Scheibler F, Rummer A, Sturtz S, Großelfinger R, Banister K, Ramsay C, Azuara-Blanco A, Cook J, Boachie C, Burr J, Kumarasamy M, Bourne R, Uchegbu I, Borsci S, Murphy J, Hanna G, Uchegbu I, Carter A, Murphy J, Ni M, Marti J, Eatock J, Uchegbu I, Robotham J, Dudareva M, Gilchrist M, Holmes A, Uchegbu I, Borsci S, Monaghan P, Lord S, StJohn A, Sandberg S, Cobbaert C, Lennartz L, Verhagen-Kamerbeek W, Ebert C, Bossuyt P, Horvath A, Jenniskens K, Naaktgeboren C, Reitsma J, Moons K, de Groot J, Hyde C, Peters J, Grigore B, Peters J, Hyde C, Hyde C, Ukoumunne O, Peters J, Zhelev Z, Levis B, Benedetti A, Levis AW, Ioannidis JPA, Shrier I, Cuijpers P, Gilbody S, Kloda LA, McMillan D, Patten SB, Steele RJ, Ziegelstein RC, Bombardier CH, Osório FL, Fann JR, Gjerdingen D, Lamers F, Lotrakul M, Loureiro SR, Löwe B, Shaaban J, Stafford L, van Weert HCPM, Whooley MA, Williams LS, Wittkampf KA, Yeung AS, Thombs BD, Peters J, Cooper C, Buchanan J, Nieto T, Smith C, Tucker O, Dretzke J, Beggs A, Rai N, Davenport C, Bayliss S, Stevens S, Snell K, Mallet S, Deeks J, Sundar S, Hall E, Porta N, Estelles DL, and de Bono J
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[This corrects the article DOI: 10.1186/s41512-016-0001-y.].
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- 2017
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40. Development and validation of prediction models for risk of adverse outcomes in women with early-onset pre-eclampsia: protocol of the prospective cohort PREP study.
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Allotey J, Marlin N, Mol BW, Von Dadelszen P, Ganzevoort W, Akkermans J, Ahmed A, Daniels J, Deeks J, Ismail K, Barnard AM, Dodds J, Kerry S, Moons C, Khan KS, Riley RD, and Thangaratinam S
- Abstract
Background: Early-onset pre-eclampsia with raised blood pressure and protein in the urine before 34 weeks' gestation is one of the leading causes of maternal deaths in the UK. The benefits to the child from prolonging the pregnancy need to be balanced against the risk of maternal deterioration. Accurate prediction models of risks are needed to plan management., Methods: We aim to undertake a multicentre prospective cohort study (Prediction of Risks in Early onset Pre-eclampsia (PREP)) to develop clinical prediction models in women with early-onset pre-eclampsia, for risk of adverse maternal outcomes by 48 h and by discharge. We will externally validate the models in two independent cohorts with 634 and 216 women. In the secondary analyses, we will assess risk of adverse fetal and neonatal outcomes at birth and by discharge., Discussion: The PREP study will quantify the risk of maternal complications at various time points and provide individualised estimates of overall risk in women with early-onset pre-eclampsia to plan the management., Trial Registration: ISRCTN registry, ISRCTN40384046., Competing Interests: The authors declare that they have no competing interests.
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- 2017
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41. Prognosis research ideally should measure time-varying predictors at their intended moment of use.
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Whittle R, Royle KL, Jordan KP, Riley RD, Mallen CD, and Peat G
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Background: Prognosis research studies (e.g. those deriving prognostic models or examining potential predictors of outcome) often collect information on time-varying predictors after their intended moment of use, sometimes using a measurement method different to that which would be used. We aimed to illustrate how estimates of predictor-outcome associations and prognostic model performance obtained from such studies may differ to those at the earlier, intended moment of use., Methods: We analysed data from two primary care cohorts of patients consulting for non-inflammatory musculoskeletal conditions: the Prognostic Research Study (PROG-RES: n = 296, aged >50 years) and the Primary care Osteoarthritis Screening Trial (POST: n = 756, >45 years). Both cohorts had collected comparable information on a potentially important time-varying predictor (current pain intensity: 0-10 numerical rating scale), other predictors (age, gender, practice) and outcome (patient-perceived non-recovery at 6 months). Using logistic regression models, we compared the direction and magnitude of predictor-outcome associations and model performance measures under two scenarios: (i) current pain intensity ascertained by the treating general practitioner in the consultation (the intended moment of use) and (ii) current pain intensity ascertained by a questionnaire mailed several days after the consultation., Results: In both cohorts, the predictor-outcome association was substantially weaker for pain measured at the consultation (OR (95% CI): PROG-RES 1.06 (0.95, 1.18); POST 1.04 (0.96, 1.12)) than for pain measured in the questionnaire (PROG-RES 1.34 (1.20, 1.48); POST 1.26 (1.18, 1.34)). The c -statistic of the multivariable model was lower when pain was measured at the consultation ( c -statistic (95% CI): PROG-RES 0.57 (0.51, 0.64); POST 0.66 (0.62, 0.70)) than when pain was measured in the questionnaire (PROG-RES 0.69 (0.63, 0.75); POST 0.72 (0.68, 0.76)), reflecting the lower OR for pain at the consultation., Conclusions: Prognostic research studies ideally should measure time-varying predictors at their intended moment of use and using the intended measurement method. Otherwise, they may produce substantially different estimates of predictor-outcome associations and model performance. Researchers should report when, how and where predictors were measured and identify any significant departures from their intended use that may limit the applicability of findings in practice., Trial Registration: The protocol for the PROG-RES cohort data collection and primary analysis has been published in an open-access journal (Mallen et al., BMC Musculoskelet Disord 7:84, 2006). The POST trial was registered (ISRCTN40721988; date of registration: 21 June 2011; date of enrolment of the first participant: 3 October 2011) and had a pre-specified protocol covering primary analysis. There was no published protocol for the current secondary analyses presented in this manuscript., Competing Interests: The authors declare that they have no competing interests.
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- 2017
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42. Erratum to: Study protocol: differential effects of diet and physical activity based interventions in pregnancy on maternal and fetal outcomes: individual patient data (IPD) meta-analysis and health economic evaluation.
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Ruifrok AE, Rogozinska E, van Poppel MN, Rayanagoudar G, Kerry S, de Groot CJ, Yeo S, Molyneaux E, Barakat Carballo R, Perales M, Bogaerts A, Cecatti JG, Surita F, Dodd J, Owens J, El Beltagy N, Devlieger R, Teede H, Harrison C, Haakstad L, Shen GX, Shub A, Motahari N, Khoury J, Tonstad S, Luoto R, Kinnunen TI, Guelfi K, Facchinetti F, Petrella E, Phelan S, Scudeller TT, Rauh K, Hauner H, Renault K, Sagedal LR, Vistad I, Stafne SN, Mørkved S, Salvesen KÅ, Vinter C, Vitolo M, Astrup A, Geiker NR, McAuliffe F, Poston L, Roberts T, Riley RD, Coomarasamy A, Khan KS, Mol BW, and Thangaratinam S
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- 2015
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43. The science of clinical practice: disease diagnosis or patient prognosis? Evidence about "what is likely to happen" should shape clinical practice.
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Croft P, Altman DG, Deeks JJ, Dunn KM, Hay AD, Hemingway H, LeResche L, Peat G, Perel P, Petersen SE, Riley RD, Roberts I, Sharpe M, Stevens RJ, Van Der Windt DA, Von Korff M, and Timmis A
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- Diagnostic Errors, Humans, Professional Practice, Decision Making, Diagnosis, Prognosis
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Background: Diagnosis is the traditional basis for decision-making in clinical practice. Evidence is often lacking about future benefits and harms of these decisions for patients diagnosed with and without disease. We propose that a model of clinical practice focused on patient prognosis and predicting the likelihood of future outcomes may be more useful., Discussion: Disease diagnosis can provide crucial information for clinical decisions that influence outcome in serious acute illness. However, the central role of diagnosis in clinical practice is challenged by evidence that it does not always benefit patients and that factors other than disease are important in determining patient outcome. The concept of disease as a dichotomous 'yes' or 'no' is challenged by the frequent use of diagnostic indicators with continuous distributions, such as blood sugar, which are better understood as contributing information about the probability of a patient's future outcome. Moreover, many illnesses, such as chronic fatigue, cannot usefully be labelled from a disease-diagnosis perspective. In such cases, a prognostic model provides an alternative framework for clinical practice that extends beyond disease and diagnosis and incorporates a wide range of information to predict future patient outcomes and to guide decisions to improve them. Such information embraces non-disease factors and genetic and other biomarkers which influence outcome., Summary: Patient prognosis can provide the framework for modern clinical practice to integrate information from the expanding biological, social, and clinical database for more effective and efficient care.
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- 2015
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44. Methodological issues and recommendations for systematic reviews of prognostic studies: an example from cardiovascular disease.
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Dretzke J, Ensor J, Bayliss S, Hodgkinson J, Lordkipanidzé M, Riley RD, Fitzmaurice D, and Moore D
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- Aspirin therapeutic use, Cardiovascular Diseases prevention & control, Drug Resistance, Humans, Prognosis, Review Literature as Topic
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Background: Prognostic factors are associated with the risk of future health outcomes in individuals with a particular health condition. The prognostic ability of such factors is increasingly being assessed in both primary research and systematic reviews. Systematic review methodology in this area is continuing to evolve, reflected in variable approaches to key methodological aspects. The aim of this article was to (i) explore and compare the methodology of systematic reviews of prognostic factors undertaken for the same clinical question, (ii) to discuss implications for review findings, and (iii) to present recommendations on what might be considered to be 'good practice' approaches., Methods: The sample was comprised of eight systematic reviews addressing the same clinical question, namely whether 'aspirin resistance' (a potential prognostic factor) has prognostic utility relative to future vascular events in patients on aspirin therapy for secondary prevention. A detailed comparison of methods around study identification, study selection, quality assessment, approaches to analysis, and reporting of findings was undertaken and the implications discussed. These were summarised into key considerations that may be transferable to future systematic reviews of prognostic factors., Results: Across systematic reviews addressing the same clinical question, there were considerable differences in the numbers of studies identified and overlap between included studies, which could only partially be explained by different study eligibility criteria. Incomplete reporting and differences in terminology within primary studies hampered study identification and selection process across reviews. Quality assessment was highly variable and only one systematic review considered a checklist for studies of prognostic questions. There was inconsistency between reviews in approaches towards analysis, synthesis, addressing heterogeneity and reporting of results., Conclusions: Different methodological approaches may ultimately affect the findings and interpretation of systematic reviews of prognostic research, with implications for clinical decision-making.
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- 2014
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45. Study protocol: differential effects of diet and physical activity based interventions in pregnancy on maternal and fetal outcomes--individual patient data (IPD) meta-analysis and health economic evaluation.
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Ruifrok AE, Rogozinska E, van Poppel MN, Rayanagoudar G, Kerry S, de Groot CJ, Yeo S, Molyneaux E, McAuliffe FM, Poston L, Roberts T, Riley RD, Coomarasamy A, Khan K, Mol BW, and Thangaratinam S
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- Economics, Medical, Female, Humans, Pregnancy, Systematic Reviews as Topic, Meta-Analysis as Topic, Diet, Reducing, Motor Activity, Pregnancy Outcome, Weight Gain physiology
- Abstract
Background: Pregnant women who gain excess weight are at risk of complications during pregnancy and in the long term. Interventions based on diet and physical activity minimise gestational weight gain with varied effect on clinical outcomes. The effect of interventions on varied groups of women based on body mass index, age, ethnicity, socioeconomic status, parity, and underlying medical conditions is not clear. Our individual patient data (IPD) meta-analysis of randomised trials will assess the differential effect of diet- and physical activity-based interventions on maternal weight gain and pregnancy outcomes in clinically relevant subgroups of women., Methods/design: Randomised trials on diet and physical activity in pregnancy will be identified by searching the following databases: MEDLINE, EMBASE, BIOSIS, LILACS, Pascal, Science Citation Index, Cochrane Database of Systematic Reviews, Cochrane Central Register of Controlled Trials, Database of Abstracts of Reviews of Effects, and Health Technology Assessment Database. Primary researchers of the identified trials are invited to join the International Weight Management in Pregnancy Collaborative Network and share their individual patient data. We will reanalyse each study separately and confirm the findings with the original authors. Then, for each intervention type and outcome, we will perform as appropriate either a one-step or a two-step IPD meta-analysis to obtain summary estimates of effects and 95% confidence intervals, for all women combined and for each subgroup of interest. The primary outcomes are gestational weight gain and composite adverse maternal and fetal outcomes. The difference in effects between subgroups will be estimated and between-study heterogeneity suitably quantified and explored. The potential for publication bias and availability bias in the IPD obtained will be investigated. We will conduct a model-based economic evaluation to assess the cost effectiveness of the interventions to manage weight gain in pregnancy and undertake a value of information analysis to inform future research., Systematic Review Registration: PROSPERO 2013: CRD42013003804.
- Published
- 2014
- Full Text
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46. Protocol for a systematic review of prognostic models for the recurrence of venous thromboembolism (VTE) following treatment for a first unprovoked VTE.
- Author
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Ensor J, Riley RD, Moore D, Bayliss S, Jowett S, and Fitzmaurice DA
- Subjects
- Anticoagulants therapeutic use, Databases, Bibliographic, Models, Theoretical, Prognosis, Risk Assessment, Secondary Prevention, Research Design, Systematic Reviews as Topic, Venous Thromboembolism prevention & control
- Abstract
Background: Venous thromboembolism (VTE) is a chronic disease, with fatal recurrences occurring in 5% to 9% of patients, yet it is also one of the best examples of preventable disease. Prognostic models that utilise multiple prognostic factors (demographic, clinical and laboratory patient characteristics) in combination to predict individual outcome risk may allow the identification of patients who would benefit from long-term anticoagulation therapy, and conversely those that would benefit from stopping such therapy due to a low risk of recurrence. The study will systematically review the evidence on potential prognostic models for the recurrence of VTE or adverse outcomes following the cessation of therapy, and synthesise and summarise each model's prognostic value. The review has been registered with PROSPERO (CRD42013003494)., Methods/design: Articles will be sought from the Cochrane library (CENTRAL, CDSR, DARE, HTA databases), MEDLINE and EMBASE. Trial registers will be searched for ongoing studies, and conference abstracts will be sought. Reference lists and subject experts will be utilised. No restrictions on language of publications will be applied. Studies of any design will be included if they examine, in patients ceasing therapy after at least three months' treatment with an oral anticoagulant therapy, whether more than one factor in combination is associated with the risk of VTE recurrence or another adverse outcome. Study quality will be assessed using appropriate guidelines for prognostic models. Prognostic models will be summarised qualitatively and, if tested in multiple validation studies, their predictive performance will be summarised using a random-effects meta-analysis model to account for any between-study heterogeneity., Discussion: The results of the review will identify prognostic models for the risk of VTE recurrence or adverse outcome following cessation of therapy for a first unprovoked VTE. These will be informative for clinicians currently treating patients for a first unprovoked VTE and considering whether to stop treatment or not for particular individuals. The conclusions of the review will also inform the potential development of new prognostic models and clinical prediction rules to identify those at high or low risk of VTE recurrence or adverse outcome following a first unprovoked VTE.
- Published
- 2013
- Full Text
- View/download PDF
47. Protocol for a systematic review of the diagnostic and prognostic utility of tests currently available for the detection of aspirin resistance in patients with established cardiovascular or cerebrovascular disease.
- Author
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Raichand S, Moore D, Riley RD, Lordkipanidzé M, Dretzke J, O'Donnell J, Jowett S, Bayliss S, and Fitzmaurice DA
- Subjects
- Cost-Benefit Analysis, Humans, Prognosis, Research Design, Systematic Reviews as Topic, Aspirin therapeutic use, Cardiovascular Diseases, Drug Resistance, Platelet Aggregation Inhibitors therapeutic use, Platelet Function Tests methods
- Abstract
Background: The benefits of aspirin as an anti-platelet agent are well established; however, there has been much debate about the lack of uniformity in the efficacy of aspirin to inhibit platelet function. In some patients, aspirin fails to inhibit platelets even where compliance has been verified, a phenomenon which has been termed "aspirin resistance". These patients may in turn be at a higher risk of future vascular events. The proportion of "resistant" patients identified depends on the type of platelet function test. Therefore, the aim of this systematic review is to determine which, if any, platelet function test has utility in terms of identifying patients with a high risk of vascular events. The review has been registered with PROSPERO (CRD42012002151)., Methods: Relevant studies will be sought from bibliographic databases. Trials registers will be searched for ongoing studies. Reference lists will be checked and subject experts contacted. There will be no date or language restrictions. Standard reviewing methodology to minimise bias will be employed. Any prospective studies in patients on aspirin therapy and assessing platelet function in relation to relevant clinical outcomes will be included, as will studies reporting prognostic models. Risk of bias assessment will be based on the Quality Assessment of Diagnostic Accuracy Studies guidelines, and suitable criteria for assessing quality of prognostic studies. Data on test accuracy measures, relative risks, odds or hazard ratios will be extracted and meta-analysed, where possible, using a random-effects model to account for between-study heterogeneity. Where appropriate, the causes of heterogeneity will be explored through meta-regression and sub-group or sensitivity analyses. If platelet function testing is demonstrated to have diagnostic/predictive utility in a specific population, the potential for a cost-effectiveness analysis will be considered and, if possible, an economic model constructed. This will be supported by a systematic review of existing economic evaluation studies., Discussion: The results of the review could indicate if platelet function test(s) could lead to a reliable prediction of the risk of clinically important events in a defined population, and thus support investigations into adjustments to therapy in order to compensate for a predicted poor response to standard aspirin.
- Published
- 2013
- Full Text
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48. Exercise therapy for chronic low back pain: protocol for an individual participant data meta-analysis.
- Author
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Hayden JA, Cartwright JL, Riley RD, and Vantulder MW
- Subjects
- Chronic Disease, Humans, Research Design, Exercise Therapy methods, Low Back Pain therapy, Meta-Analysis as Topic
- Abstract
Background: Low back pain (LBP) is one of the leading causes of disability and has a major socioeconomic impact. Despite a large amount of research in the field, there remains uncertainty about the best treatment approach for chronic LBP, and identification of relevant patient subgroups is an important goal. Exercise therapy is a commonly used strategy to treat chronic low back pain and is one of several interventions that evidence suggests is moderately effective.In parallel with an update of the 2005 Cochrane review, we will undertake an individual participant data (IPD) meta-analysis, which will allow us to standardize analyses across studies and directly derive results, and to examine differential treatment effects across individuals to estimate how patients' characteristics modify treatment benefit., Methods/design: We will use standard systematic review methods advocated by the Cochrane Collaboration to identify relevant trials. We will include trials evaluating exercise therapy compared to any or no other interventions in adult non-specific chronic LBP. Our primary outcomes of interest include pain, functional status, and return-to-work/absenteeism. We will assess potential risk of bias for each study meeting selection criteria, using criteria and methods recommended by the Cochrane BRG.The original individual participant data will be requested from the authors of selected trials having moderate to low risk of bias. We will test original data and compile a master dataset with information about each trial mapped on a pre-specified framework, including reported characteristics of the study sample, exercise therapy characteristics, individual patient characteristics at baseline and all follow-up periods, subgroup and treatment effect modifiers investigated. Our analyses will include descriptive, study-level meta-analysis and meta-regression analyses of the overall treatment effect, and individual-level IPD meta-analyses of treatment effect modification. IPD meta-analyses will be conducted using a one-step approach where the IPD from all studies are modeled simultaneously while accounting for the clustering of participants with studies., Discussion: We will analyze IPD across a large number of LBP trials. The resulting larger sample size and consistent presentation of data will allow additional analyses to explore patient-level heterogeneity in treatment outcomes and prognosis of chronic LBP.
- Published
- 2012
- Full Text
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49. Individual patient data meta-analysis of survival data using Poisson regression models.
- Author
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Crowther MJ, Riley RD, Staessen JA, Wang J, Gueyffier F, and Lambert PC
- Subjects
- Analysis of Variance, Bayes Theorem, Cause of Death, Female, Health Status Indicators, Humans, Hypertension mortality, Hypertension therapy, Intention to Treat Analysis, Male, Proportional Hazards Models, Randomized Controlled Trials as Topic, Regression Analysis, Treatment Outcome, Data Collection statistics & numerical data, Linear Models, Meta-Analysis as Topic, Poisson Distribution, Survival Analysis
- Abstract
Background: An Individual Patient Data (IPD) meta-analysis is often considered the gold-standard for synthesising survival data from clinical trials. An IPD meta-analysis can be achieved by either a two-stage or a one-stage approach, depending on whether the trials are analysed separately or simultaneously. A range of one-stage hierarchical Cox models have been previously proposed, but these are known to be computationally intensive and are not currently available in all standard statistical software. We describe an alternative approach using Poisson based Generalised Linear Models (GLMs)., Methods: We illustrate, through application and simulation, the Poisson approach both classically and in a Bayesian framework, in two-stage and one-stage approaches. We outline the benefits of our one-stage approach through extension to modelling treatment-covariate interactions and non-proportional hazards. Ten trials of hypertension treatment, with all-cause death the outcome of interest, are used to apply and assess the approach., Results: We show that the Poisson approach obtains almost identical estimates to the Cox model, is additionally computationally efficient and directly estimates the baseline hazard. Some downward bias is observed in classical estimates of the heterogeneity in the treatment effect, with improved performance from the Bayesian approach., Conclusion: Our approach provides a highly flexible and computationally efficient framework, available in all standard statistical software, to the investigation of not only heterogeneity, but the presence of non-proportional hazards and treatment effect modifiers.
- Published
- 2012
- Full Text
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50. Predicting infectious complications in neutropenic children and young people with cancer (IPD protocol).
- Author
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Phillips RS, Sutton AJ, Riley RD, Chisholm JC, Picton SV, and Stewart LA
- Subjects
- Adolescent, Child, Child, Preschool, Humans, Infant, Infant, Newborn, Predictive Value of Tests, Young Adult, Meta-Analysis as Topic, Anti-Infective Agents therapeutic use, Fever etiology, Infections etiology, Neoplasms complications, Neoplasms therapy, Neutropenia etiology
- Abstract
Background: A common and potentially life-threatening complication of the treatment of childhood cancer is infection, which frequently presents as fever with neutropenia. The standard management of such episodes is the extensive use of intravenous antibiotics, and though it produces excellent survival rates of over 95%, it greatly inconveniences the three-fourths of patients who do not require such aggressive treatment. There have been a number of studies which have aimed to develop risk prediction models to stratify treatment. Individual participant data (IPD) meta-analysis in therapeutic studies has been developed to improve the precision and reliability of answers to questions of treatment effect and recently have been suggested to be used to answer questions regarding prognosis and diagnosis to gain greater power from the frequently small individual studies., Design: In the IPD protocol, we will collect and synthesise IPD from multiple studies and examine the outcomes of episodes of febrile neutropenia as a consequence of their treatment for malignant disease. We will develop and evaluate a risk stratification model using hierarchical regression models to stratify patients by their risk of experiencing adverse outcomes during an episode. We will also explore specific practical and methodological issues regarding adaptation of established techniques of IPD meta-analysis of interventions for use in synthesising evidence derived from IPD from multiple studies for use in predictive modelling contexts., Discussion: Our aim in using this model is to define a group of individuals at low risk for febrile neutropenia who might be treated with reduced intensity or duration of antibiotic therapy and so reduce the inconvenience and cost of these episodes, as well as to define a group of patients at very high risk of complications who could be subject to more intensive therapies. The project will also help develop methods of IPD predictive modelling for use in future studies of risk prediction.
- Published
- 2012
- Full Text
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